prot_H-elongata_contig5349.12694.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5349.12694.1
Unique Nameprot_H-elongata_contig5349.12694.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
BLAST of mRNA_H-elongata_contig5349.12694.1 vs. uniprot
Match: A0A6H5L374_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L374_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 7.530e-78
Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = 0
Query:    1 MPIKTMKRRLEELGANPRRLTTCLEKGECVSLVMGSMLLSREGLVREGGQLPPWVSLLRGWRWSYYYAKADARRCWLSMDDLVRFPWTMSFPADIPT--PASPLL-VTCKFHRNFCYTDEGFYQNGLDWHFEDSHRCVKVSSYPALEAERDP-SWGWRLVNAHVIFEQQRRPP 169
            MPIK MKRRL ELGANP RL  CLEK ECVSL+MGSMLLSR+GL+R+ GQLP W+S +RGWRWS+++A  DA+R W++M+DL R PW MSFP  + +  P  PLL V C+FHR+F YTD GF+Q+GL WHFED+H  VKVS+YPALE ERD  SWGWRL+NAHV F+Q R  P
Sbjct:  241 MPIKVMKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPWMMSFPGHVSSAVPPPPLLAVRCEFHRDFTYTDAGFHQDGLVWHFEDNHHFVKVSNYPALEVERDEKSWGWRLINAHVTFQQDRALP 413          
BLAST of mRNA_H-elongata_contig5349.12694.1 vs. uniprot
Match: D8LLT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT4_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.990e-28
Identity = 76/172 (44.19%), Postives = 88/172 (51.16%), Query Frame = 0
Query:    1 MPIKTMKRRLEELGANPRRLTTCLEKGECVSL--VMGSMLLSREGLVREGGQLPPWVSLLRGWRWSYYYAKADARRCWLSMDDLVRFPWTMSFPADIPTPASPLLVTCKFHRNFCYTDEGFYQNGLDWHFEDSHRCVKVSSYPALEAERDP-SWGWRLVNAHVIFEQQRRPP 169
            MPIK MKRRL ELGANP RL  CLEKG  +        + L+ EGL  E   LP    LL+G +     A  D                      D   P    L             +GF+Q+GL WHFED+HR VKVS+YPALE ERD  SWGWRLVNAHV F+Q+R  P
Sbjct:    1 MPIKVMKRRLHELGANPARLAACLEKGRPLEAEGTAAGVALAGEGLAVE---LP---LLLQGRQ-----AAVD----------------------DHGGPGKNAL-------------DGFHQDGLVWHFEDNHRFVKVSNYPALEVERDEKSWGWRLVNAHVTFKQERAVP 126          
BLAST of mRNA_H-elongata_contig5349.12694.1 vs. uniprot
Match: A0A7S4I1I9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I1I9_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 8.350e-7
Identity = 35/127 (27.56%), Postives = 51/127 (40.16%), Query Frame = 0
Query:   61 WRWSYYYAKADARRCWLSMDDLVRFPWTMSFPADIP----TPASPLLVTCKFHRNFCYTDEGFYQNG----------LDWHFEDSH----RCVKVSSYPALEAERDPSWGWRLVNAHVIFEQQRRPP 169
            W+  + +   DA RC L+  +L    W   F  D+     T A       +      +  +GFY +           L W    +       V++ SYP L+ ER P WGWR+ N  V F  + RPP
Sbjct:   32 WKQEFAFRLTDAARCRLTTAELTCAEWRFRFRHDLQAMHLTDAEREQYRERAPATLHFDPDGFYSSTIPGAPSALRPLRWRLMAASGGDSALVQIGSYPLLQVERTPDWGWRMRNQFVEFYTEARPP 158          
BLAST of mRNA_H-elongata_contig5349.12694.1 vs. uniprot
Match: A0A7S4MCY5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MCY5_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 2.060e-6
Identity = 35/127 (27.56%), Postives = 51/127 (40.16%), Query Frame = 0
Query:   61 WRWSYYYAKADARRCWLSMDDLVRFPWTMSFPADIP----TPASPLLVTCKFHRNFCYTDEGFYQNG----------LDWHFEDSH----RCVKVSSYPALEAERDPSWGWRLVNAHVIFEQQRRPP 169
            W+  + +   DA RC L+  +L    W   F  D+     T A       +      +  +GFY +           L W    +       V++ SYP L+ ER P WGWR+ N  V F  + RPP
Sbjct:  106 WKQEFAFRLTDAARCRLTTAELTCAEWRFRFRHDLQAMHLTDAEREQYRERAPATLHFDPDGFYSSTIPGAPSALRPLRWRLMAASGGDSALVQIGSYPLLQVERTPDWGWRMRNQFVEFYTEARPP 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5349.12694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L374_9PHAE7.530e-7865.90F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLT4_ECTSI2.990e-2844.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4I1I9_9EUKA8.350e-727.56Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S4MCY5_9EUKA2.060e-627.56Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5349contigH-elongata_contig5349:2373..3847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5349.12694.1mRNA_H-elongata_contig5349.12694.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5349 1017..4459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5349.12694.1 ID=prot_H-elongata_contig5349.12694.1|Name=mRNA_H-elongata_contig5349.12694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
MPIKTMKRRLEELGANPRRLTTCLEKGECVSLVMGSMLLSREGLVREGGQ
LPPWVSLLRGWRWSYYYAKADARRCWLSMDDLVRFPWTMSFPADIPTPAS
PLLVTCKFHRNFCYTDEGFYQNGLDWHFEDSHRCVKVSSYPALEAERDPS
WGWRLVNAHVIFEQQRRPP*
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