prot_H-elongata_contig53422.12682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53422.12682.1
Unique Nameprot_H-elongata_contig53422.12682.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.110e-9
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MFGTFTPEMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIKA 59
            ++G    E   AV     +I R I PEEIA +VIFLAS+DAAM TG+ Y MDGG+ IKA
Sbjct:  198 IYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGGWAIKA 256          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: UPI001AAFF1BB (SDR family oxidoreductase n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI001AAFF1BB)

HSP 1 Score: 56.6 bits (135), Expect = 1.130e-8
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   18 HVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGG 54
            H+IQRL  PEEIAKLV FLAS+DA+  TG VYQ+DGG
Sbjct:   86 HLIQRLGRPEEIAKLVCFLASEDASFLTGAVYQIDGG 122          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: A0A3G8JKT9_9ACTN (D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Gordonia insulae TaxID=2420509 RepID=A0A3G8JKT9_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 1.460e-8
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    8 EMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIK 58
            E+ E V+  E  I+RL+ PEE+  LV +LASDDAAM TGT Y MDGG+  +
Sbjct:  200 EVVEKVMLTESAIKRLVRPEEVGSLVAWLASDDAAMVTGTSYPMDGGWSAR 250          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: A0A3N6D2E4_9BACI (Uncharacterized protein n=1 Tax=Priestia endophytica TaxID=135735 RepID=A0A3N6D2E4_9BACI)

HSP 1 Score: 53.9 bits (128), Expect = 3.550e-8
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 MFGTFTPEMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGF 55
            + G  TP+ K  +V   H + RL TPEE+AK V+FLASDDA+  TGT   +DGG+
Sbjct:   16 LIGRATPDYKSHLVDL-HPLGRLRTPEEVAKTVLFLASDDASCVTGTSLLIDGGY 69          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: UPI001BEADC9F (3-hydroxybutyrate dehydrogenase n=1 Tax=Arthrobacter sp. ISL-30 TaxID=2819109 RepID=UPI001BEADC9F)

HSP 1 Score: 57.0 bits (136), Expect = 3.870e-8
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    8 EMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIK 58
            E+   V+  E  I+RL+ PEE+A LV++LASDDA M TG  Y MDGG+  K
Sbjct:  199 EVLSRVMLTESAIKRLVEPEEVASLVVWLASDDAGMVTGASYTMDGGWSAK 249          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 5.660e-8
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    1 MFGTFTPEMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIKA 59
            +FG    +   A      ++ R   PEEIAK+VIFLAS+DA M TG+ Y MDGG+ +KA
Sbjct:  200 IFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 258          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: UPI00166B6C64 (3-hydroxybutyrate dehydrogenase n=1 Tax=Nocardia rhizosphaerihabitans TaxID=1691570 RepID=UPI00166B6C64)

HSP 1 Score: 56.2 bits (134), Expect = 7.370e-8
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    8 EMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIK 58
            E+ E V+  E VI+RLI PEE+A+LV +LASD A M TG+ Y MDGG+  +
Sbjct:  198 EVVEKVLLTESVIKRLIEPEEVARLVAWLASDQAGMITGSSYVMDGGWSAR 248          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: UPI001655E333 (3-hydroxybutyrate dehydrogenase n=1 Tax=Gordonia sp. OPL2 TaxID=2486274 RepID=UPI001655E333)

HSP 1 Score: 56.2 bits (134), Expect = 7.420e-8
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   10 KEAVVKK----EHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIK 58
            ++AVV+K    E  ++RL+ PEE+A LV +LASDDAAM TG  Y MDGG+  +
Sbjct:  197 EDAVVEKIMLTESAVKRLVRPEEVASLVAWLASDDAAMVTGASYPMDGGWSAR 249          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: A0A8H7TDK8_9HELO (Uncharacterized protein n=1 Tax=Cadophora malorum TaxID=108018 RepID=A0A8H7TDK8_9HELO)

HSP 1 Score: 56.2 bits (134), Expect = 9.410e-8
Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    9 MKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGF 55
            + +  + KE VI+R  TPEE+A++++FLASDDA+  TG++Y +DGGF
Sbjct:  256 LNDEKIGKEGVIERFGTPEEVAQVILFLASDDASFVTGSLYGVDGGF 302          
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Match: UPI00146AF5E6 (3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodococcus sp. HNM0569 TaxID=2716340 RepID=UPI00146AF5E6)

HSP 1 Score: 55.8 bits (133), Expect = 1.030e-7
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    8 EMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQMDGGFGIK 58
            E+ E V+  E  I+RL+ P+E+A LV++LA DDAAM TG  Y MDGG+  +
Sbjct:  199 EVIERVMLTESAIKRLVRPDEVASLVVWLAGDDAAMVTGASYTMDGGWSSR 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53422.12682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS3_ECTSI1.110e-954.24Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
UPI001AAFF1BB1.130e-872.97SDR family oxidoreductase n=1 Tax=Pseudomonas aeru... [more]
A0A3G8JKT9_9ACTN1.460e-854.90D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Gordo... [more]
A0A3N6D2E4_9BACI3.550e-850.91Uncharacterized protein n=1 Tax=Priestia endophyti... [more]
UPI001BEADC9F3.870e-852.943-hydroxybutyrate dehydrogenase n=1 Tax=Arthrobact... [more]
D8LQS1_ECTSI5.660e-847.46Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
UPI00166B6C647.370e-854.903-hydroxybutyrate dehydrogenase n=1 Tax=Nocardia r... [more]
UPI001655E3337.420e-852.833-hydroxybutyrate dehydrogenase n=1 Tax=Gordonia s... [more]
A0A8H7TDK8_9HELO9.410e-851.06Uncharacterized protein n=1 Tax=Cadophora malorum ... [more]
UPI00146AF5E61.030e-750.983-hydroxybutyrate dehydrogenase n=1 Tax=Rhodococcu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..58
e-value: 2.5E-12
score: 49.1
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 11..55
e-value: 6.2E-11
score: 42.3
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 7..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53422contigH-elongata_contig53422:165..524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53422.12682.1mRNA_H-elongata_contig53422.12682.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53422 2..1030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53422.12682.1 ID=prot_H-elongata_contig53422.12682.1|Name=mRNA_H-elongata_contig53422.12682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
MFGTFTPEMKEAVVKKEHVIQRLITPEEIAKLVIFLASDDAAMATGTVYQ
MDGGFGIKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf