prot_H-elongata_contig53316.12671.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53316.12671.1
Unique Nameprot_H-elongata_contig53316.12671.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: D7FR01_ECTSI (PC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR01_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 5.410e-22
Identity = 41/64 (64.06%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    3 LQLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            ++LG  K+VDVREFKG I +DIREYYE   GE++PGKKGI+L+ E W+ LKE+M+DI AK+EEL
Sbjct:   64 IELGNKKFVDVREFKGKIYVDIREYYEK-DGEMRPGKKGISLSTEHWEVLKENMDDINAKVEEL 126          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: H2ZUX1_LATCH (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZUX1_LATCH)

HSP 1 Score: 88.6 bits (218), Expect = 7.990e-22
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV+VREFKG +LIDIREY+    GE+KPG+KGI+LNPEQW  LKE M DI   I +L
Sbjct:    3 QIGKMRYVNVREFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQMSDIDDAIRKL 65          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: UPI0001CBA191 (activated RNA polymerase II transcriptional coactivator p15-like isoform X1 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA191)

HSP 1 Score: 88.2 bits (217), Expect = 4.530e-21
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    3 LQLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            + L K +YV VR+FKG +LIDIREYY   SGE+KPG+KGI+LN EQW  LKES+ +I  KIEEL
Sbjct:   52 IALAKMRYVTVRDFKGKVLIDIREYYNDNSGELKPGRKGISLNKEQWDKLKESIGEIDEKIEEL 115          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A3P8VVN1_CYNSE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VVN1_CYNSE)

HSP 1 Score: 88.2 bits (217), Expect = 5.760e-21
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDI 59
            Q+GK +YV VREFKG +LIDIREY+ +A+GE+KPGKKGI+LNPEQW  LK  M DI
Sbjct:   63 QIGKMRYVSVREFKGKVLIDIREYWMNANGEMKPGKKGISLNPEQWNQLKHQMSDI 118          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A3B3TBF2_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3TBF2_9TELE)

HSP 1 Score: 88.2 bits (217), Expect = 5.760e-21
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV VR+FKG +LIDIREY+    GE+KPGKKGI+LNPEQW  LKE M DI   ++ L
Sbjct:   63 QIGKMRYVSVRDFKGKVLIDIREYWMDQQGEMKPGKKGISLNPEQWNQLKEQMSDIDEAVKRL 125          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A8C4B0P0_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4B0P0_9TELE)

HSP 1 Score: 88.2 bits (217), Expect = 7.310e-21
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV VR+FKG +LIDIREY+   +GE+KPGKKGI+LNPEQW  LKE M DI   I  L
Sbjct:   72 QIGKMRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLNPEQWNQLKEQMSDIDDAIRRL 134          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A2D0PRJ9_ICTPU (Activated RNA polymerase II transcriptional coactivator p15 n=6 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0PRJ9_ICTPU)

HSP 1 Score: 87.8 bits (216), Expect = 8.170e-21
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV VR+FKG +LID+REY+   +GE+KPGKKGI+LNPEQW  LKE M DI   I  L
Sbjct:   63 QIGKMRYVSVRDFKGKVLIDVREYWMDQAGEMKPGKKGISLNPEQWNQLKEQMSDIDDAIRRL 125          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: C1C437_LITCT (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Ranoidea TaxID=30352 RepID=C1C437_LITCT)

HSP 1 Score: 87.8 bits (216), Expect = 9.090e-21
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV VR+FKG +LIDIREY+    GE+KPG+KGI+LNPEQW  LKE M DI   I +L
Sbjct:   67 QIGKMRYVSVRDFKGKVLIDIREYFMDQQGELKPGRKGISLNPEQWSQLKEQMSDIDNAIRKL 129          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A8B9G909_9PSIT (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9G909_9PSIT)

HSP 1 Score: 87.0 bits (214), Expect = 1.010e-20
Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 MFLQLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            + LQ+GK +YV VR+FKG +LIDIREY+    GE+KPG+KGI+LNPEQW  LKE + DI   + +L
Sbjct:   42 LVLQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISDIDDAVRKL 107          
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Match: A0A6P6NC73_CARAU (Activated RNA polymerase II transcriptional coactivator p15 n=5 Tax=Cyprinoidei TaxID=30727 RepID=A0A6P6NC73_CARAU)

HSP 1 Score: 87.4 bits (215), Expect = 1.160e-20
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    4 QLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWKALKESMEDITAKIEEL 66
            Q+GK +YV VR+FKG +LIDIREY+   +GE+KPGKKGI+LNPEQW  LKE M DI   +  L
Sbjct:   63 QIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLNPEQWNQLKEQMSDIDDAVRRL 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53316.12671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR01_ECTSI5.410e-2264.06PC4 domain-containing protein n=2 Tax=Ectocarpus T... [more]
H2ZUX1_LATCH7.990e-2263.49Activated RNA polymerase II transcriptional coacti... [more]
UPI0001CBA1914.530e-2164.06activated RNA polymerase II transcriptional coacti... [more]
A0A3P8VVN1_CYNSE5.760e-2169.64Activated RNA polymerase II transcriptional coacti... [more]
A0A3B3TBF2_9TELE5.760e-2161.90Activated RNA polymerase II transcriptional coacti... [more]
A0A8C4B0P0_9TELE7.310e-2163.49Activated RNA polymerase II transcriptional coacti... [more]
A0A2D0PRJ9_ICTPU8.170e-2161.90Activated RNA polymerase II transcriptional coacti... [more]
C1C437_LITCT9.090e-2161.90Activated RNA polymerase II transcriptional coacti... [more]
A0A8B9G909_9PSIT1.010e-2057.58Activated RNA polymerase II transcriptional coacti... [more]
A0A6P6NC73_CARAU1.160e-2061.90Activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..67
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 2..66
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 2..66
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 4..55
e-value: 1.0E-24
score: 85.9
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 1..66
e-value: 4.3E-28
score: 98.6
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53316contigH-elongata_contig53316:695..1505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53316.12671.1mRNA_H-elongata_contig53316.12671.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53316 680..2145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53316.12671.1 ID=prot_H-elongata_contig53316.12671.1|Name=mRNA_H-elongata_contig53316.12671.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MFLQLGKNKYVDVREFKGMILIDIREYYESASGEIKPGKKGIALNPEQWK
ALKESMEDITAKIEELQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003173PC4
IPR009044ssDNA-bd_transcriptional_reg