prot_H-elongata_contig5331.12668.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5331.12668.1
Unique Nameprot_H-elongata_contig5331.12668.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A6H5K1G5_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.380e-11
Identity = 44/95 (46.32%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGGDCCGIRPIEAVFAAQRRPYAAVAKMVNAISQNE-RGDMPGISGNK 94
            CSKSACLKRYCECF+ G+ACS+KCRCK CKNT  A  AR    +  A     CG     A+ AA  R   A        +++  RG +PG  G K
Sbjct:   78 CSKSACLKRYCECFNGGIACSNKCRCKDCKNTAKAVGARARAKMMAAK--SSCG-----AMIAADGRGVIAAXXXXXXXTESRTRGGIPGRHGVK 165          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A8J5XVP9_DIALT (CRC domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVP9_DIALT)

HSP 1 Score: 62.4 bits (150), Expect = 1.550e-8
Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPA-----ARARTEPGIAGAGGGDCCGIRPIEAVFAAQRRPYAAVAKMVNAISQNERGDMP 88
            C KS CLK+YCECF  G+ACSDKC+C  C N   A     A AR    + G+ G   CG R   A   A   P   +   ++ +  N     P
Sbjct:  231 CKKSGCLKKYCECFGAGIACSDKCKCDNCHNREDADGFDDAHARRRKRLRGSSGSAACGRRLSLASTVADDEPRTELLDGLSDVEVNGESHAP 323          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.900e-7
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTV 33
            C KSACLK+YCECF+ GVACS+KC C  C+NTV
Sbjct:  456 CRKSACLKKYCECFNKGVACSEKCNCVACRNTV 488          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 3.770e-7
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTV 33
            C KSACLK+YCECF+ GVACS+KC C  C+NTV
Sbjct:  102 CRKSACLKKYCECFNKGVACSEKCNCVGCRNTV 134          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: I2CP39_NANGC (Tesmin tso1-like cxc domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP39_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 6.510e-7
Identity = 33/82 (40.24%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGGDCCGIRPIEAVFAAQRRPYAAVAKMVNAISQN 82
            C KSACLK+YCECF+ G  CSDKC C  C+N            +AG G       RP E    A RR   A  +    + QN
Sbjct:  299 CRKSACLKKYCECFNAGARCSDKCSCVGCQN------------VAGLG-------RPYEEAVMAARRGATAARQAAQQVGQN 361          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: K8YUM5_NANGC (Tesmin tso1-like cxc domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUM5_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 6.510e-7
Identity = 33/82 (40.24%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGGDCCGIRPIEAVFAAQRRPYAAVAKMVNAISQN 82
            C KSACLK+YCECF+ G  CSDKC C  C+N            +AG G       RP E    A RR   A  +    + QN
Sbjct:  299 CRKSACLKKYCECFNAGARCSDKCSCVGCQN------------VAGLG-------RPYEEAVMAARRGATAARQAAQQVGQN 361          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A4D9CLN2_9STRA (CRC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 7.150e-7
Identity = 33/82 (40.24%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGGDCCGIRPIEAVFAAQRRPYAAVAKMVNAISQN 82
            C KSACLK+YCECF+ G  CSDKC C  C+N            +AG G       RP E    A RR   A  +    + QN
Sbjct:  461 CRKSACLKKYCECFNAGARCSDKCSCVGCQN------------VAGLG-------RPYEEAVMAARRGATAARQAAQQVGQN 523          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A7S0PST3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PST3_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 1.710e-6
Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTV--PAARAR 39
            C KSACLK+YCECF  GV C D C+C+ CKN V  PAA  R
Sbjct:  402 CKKSACLKKYCECFQAGVKCQDYCKCEGCKNNVDGPAAGPR 442          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: A0A7S0D9D3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D9D3_MICPS)

HSP 1 Score: 56.2 bits (134), Expect = 2.240e-6
Identity = 28/51 (54.90%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGGD 51
            C KSACLK+YCECF  GV C + C+C+ CKNT   A A    G  GA  GD
Sbjct:  195 CKKSACLKKYCECFQAGVPCQEYCKCEGCKNT---AGAGPHAGNGGAARGD 242          
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Match: UPI0005397A0E (protein tesmin/TSO1-like CXC 4 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI0005397A0E)

HSP 1 Score: 56.2 bits (134), Expect = 2.310e-6
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    1 CSKSACLKRYCECFSVGVACSDKCRCKYCKNTV 33
            C KS CLKRYCECF++GV CS  CRC  CKN +
Sbjct:  531 CRKSGCLKRYCECFTMGVGCSSSCRCMGCKNNI 563          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5331.12668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1G5_9PHAE1.380e-1146.32CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J5XVP9_DIALT1.550e-837.63CRC domain-containing protein n=2 Tax=Diacronema l... [more]
A0A6H5JPL0_9PHAE2.900e-772.73CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LP28_ECTSI3.770e-772.73TSO1 transcription factor (Partial) (Fragment) n=1... [more]
I2CP39_NANGC6.510e-740.24Tesmin tso1-like cxc domain-containing protein (Fr... [more]
K8YUM5_NANGC6.510e-740.24Tesmin tso1-like cxc domain-containing protein (Fr... [more]
A0A4D9CLN2_9STRA7.150e-740.24CRC domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S0PST3_9CHLO1.710e-663.41Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A7S0D9D3_MICPS2.240e-654.90Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
UPI0005397A0E2.310e-666.67protein tesmin/TSO1-like CXC 4 n=1 Tax=Camelina sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 1..35
e-value: 1.3E-5
score: 34.6
IPR005172CRC domainPFAMPF03638TCRcoord: 1..32
e-value: 9.9E-10
score: 38.6
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..34
score: 14.587
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 1..99
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 1..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5331contigH-elongata_contig5331:4649..5095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5331.12668.1mRNA_H-elongata_contig5331.12668.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5331 4649..6444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5331.12668.1 ID=prot_H-elongata_contig5331.12668.1|Name=mRNA_H-elongata_contig5331.12668.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
CSKSACLKRYCECFSVGVACSDKCRCKYCKNTVPAARARTEPGIAGAGGG
DCCGIRPIEAVFAAQRRPYAAVAKMVNAISQNERGDMPGISGNKRPKSMA
MEERAQDRAVAGVDVCPSFPPTAKADFRSPLGVLTGVGSASNRGTTGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam