prot_H-elongata_contig53100.12640.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53100.12640.1
Unique Nameprot_H-elongata_contig53100.12640.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.290e-38
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    1 RKTEYITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQWETVVDP-ILGEASQ--VRWTGICSGEGGSRNKTMKVMEKLKARQPFKLKEKEGQENALQAKR-----LKKLQQKNARR 158
            R   Y  E+  +A+DYADHAGR  +G+ D RLA RKKQ AL++GP SRE+  +Q DE+NRIPLP IP+KFGVRLPP ++Q TLPNLQWE   +P +  EA +  V      S   G+RNK  K    L+ ++P  LKEK+ QE A +AK       ++LQ +NA+R
Sbjct:   23 RMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAEPPVHDEAGEMDVDPEQAPSPLSGNRNKKAKTTPGLETKKPLTLKEKKEQEEANRAKAEAKAARRRLQAQNAKR 188          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A4V1IWR4_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IWR4_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 4.860e-12
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y+T++  +A+ YADHAG+  V LDD +LA +       +GP  RE +T+   E N  PLP IPE++G+RLPP ++  T  N Q
Sbjct:   35 YMTDVFQDAQLYADHAGKRDVDLDDVQLAIQGIVNNSFTGPPPREFLTELAAEKNSAPLPLIPERYGIRLPPEQYCLTGANYQ 117          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: F4P4F0_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4F0_BATDJ)

HSP 1 Score: 68.6 bits (166), Expect = 6.320e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y+ ++  +++ +ADHAG   + +DD RLA   +     +GP SRE + +  ++ N IPLP IPEKFG+RLPP +   T  N Q
Sbjct:   34 YVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 116          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A1S8VMC7_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VMC7_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 8.970e-12
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y+ ++  +++ +ADHAG  ++ +DD RLA   +     +GP SRE + +  ++ N IPLP IPEKFG+RLPP +   T  N Q
Sbjct:   48 YVQDVLQDSQVFADHAGHKELEVDDVRLAIESRVAHSFTGPPSRETMMELAEKKNSIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 1.260e-11
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y T++  +A  Y++HAGR  VGLDD RLA + +     + P  +E + +  +E NR+PLP IPEK+G+RLP  +   T  N Q
Sbjct:   40 YTTDVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQ 122          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A177WG97_BATDL (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WG97_BATDL)

HSP 1 Score: 68.6 bits (166), Expect = 4.880e-11
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y+ ++  +++ +ADHAG   + +DD RLA   +     +GP SRE + +  ++ N IPLP IPEKFG+RLPP +   T  N Q
Sbjct:   48 YVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: UPI000644E8C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8C7)

HSP 1 Score: 68.2 bits (165), Expect = 1.820e-10
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQWETVVDPILGEASQVRWTGICSGEGGSRNKTM 119
            Y+ E+  ++  Y++H+GR+++ + D RL+ + +     + P  RE +    +E NRIPLP IP+KFGV LPP ++    PN Q    VDP   + +Q +       + G  NKT+
Sbjct:  204 YVYEVLQDSIAYSEHSGRSEIDISDIRLSIQSRVNFSFTQPPPRELLLSISEEKNRIPLPPIPQKFGVLLPPDEYCLNYPNYQ----VDPAKPKPAQHQAPLSHPSQRGQYNKTV 314          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A1Y2GSY7_9FUNG (Transcription initiation factor IID, 31kD subunit-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GSY7_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 2.870e-10
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y T++  +A  Y++HAGR +VGL+D +LA + +     + P  +E + +  +E N++PLP IPEK+G+RLP  +   T  N Q
Sbjct:   40 YTTDVFQDALLYSEHAGRTEVGLEDVKLAIQGRVNHSFTSPPLKEFLLELAEEKNKVPLPLIPEKYGIRLPHERHCLTAVNFQ 122          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A4V1J4V0_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J4V0_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 9.080e-10
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQ 87
            Y  E+  +A  Y++HAG+  + ++D RLA + +     + P S+E + +  +E N  PLP +PEKFG+RLPP K   T  N Q
Sbjct:   43 YTVEVFQDALIYSEHAGKNDLDVEDVRLAIQGRVNHSFTTPPSKEFLLELAEERNSTPLPLLPEKFGIRLPPEKHCLTAVNFQ 125          
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Match: A0A2G5B8F3_COERN (TFIID-31kDa-domain-containing protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B8F3_COERN)

HSP 1 Score: 63.9 bits (154), Expect = 9.430e-10
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    5 YITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREEITQQVDEINRIPLPAIPEKFGVRLPPPKFQTT 82
            Y  ++  +A  YA+HA +A + +DD RLA + +     + P  +E + +  +E N+ PLP IPEK+GVRLPP K+  T
Sbjct:   45 YTVDVMQDALVYAEHAKKADIDMDDMRLAIQGRVNYSFTSPPDKEFLLELAEERNKHPLPLIPEKYGVRLPPEKYTLT 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53100.12640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI1.290e-3849.40Transcription initiation factor TFIID subunit n=2 ... [more]
A0A4V1IWR4_9FUNG4.860e-1243.37Transcription initiation factor TAFII31 n=1 Tax=Th... [more]
F4P4F0_BATDJ6.320e-1240.96Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
A0A1S8VMC7_9FUNG8.970e-1240.96Uncharacterized protein n=3 Tax=Batrachochytrium s... [more]
A0A197JZG0_9FUNG1.260e-1142.17TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
A0A177WG97_BATDL4.880e-1140.96Uncharacterized protein n=1 Tax=Batrachochytrium d... [more]
UPI000644E8C71.820e-1033.91hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1Y2GSY7_9FUNG2.870e-1038.55Transcription initiation factor IID, 31kD subunit-... [more]
A0A4V1J4V0_9FUNG9.080e-1038.55Transcription initiation factor TAFII31 n=1 Tax=Di... [more]
A0A2G5B8F3_COERN9.430e-1039.74TFIID-31kDa-domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availablePANTHERPTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDcoord: 5..95
NoneNo IPR availablePANTHERPTHR12595:SF6TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 5..95
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..37
e-value: 1.4E-5
score: 27.1
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 4..86
e-value: 2.1E-15
score: 56.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53100contigH-elongata_contig53100:1669..2986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53100.12640.1mRNA_H-elongata_contig53100.12640.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53100 1669..2986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53100.12640.1 ID=prot_H-elongata_contig53100.12640.1|Name=mRNA_H-elongata_contig53100.12640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
RKTEYITEIATEAKDYADHAGRAKVGLDDARLAARKKQYALASGPLSREE
ITQQVDEINRIPLPAIPEKFGVRLPPPKFQTTLPNLQWETVVDPILGEAS
QVRWTGICSGEGGSRNKTMKVMEKLKARQPFKLKEKEGQENALQAKRLKK
LQQKNARRPDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003162TFIID-31