prot_H-elongata_contig5306.12631.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig5306.12631.1
Unique Name	prot_H-elongata_contig5306.12631.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	82

Homology

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BLAST of mRNA_H-elongata_contig5306.12631.1 vs. uniprot
Match: D7G5Y8_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G5Y8_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.140e-8
Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 0

Query:    7 GDLEICSSSTQRFVFLAMPIVLAASLGGIYEAIWKHSEANSRKRHDHDDEAISRDKTGSDVKAPGVFSILNKITSY 82
             DL I  S T +F+F+ +PI+L A+LGG+YEA+WK  E  S +  +H D A + ++  S    PG+ +  + +  Y
Sbjct:   62 ADLYIKHSDTSKFIFIGLPIILTAALGGVYEALWKRREIRSTQ--EHPDSAAAGEEEDS---KPGILAFFHSVVHY 132

[Close]

BLAST of mRNA_H-elongata_contig5306.12631.1 vs. uniprot
Match: A0A6H5KG64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG64_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 1.890e-5
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:    8 DLEICSSSTQRFVFLAMPIVLAASLGGIYEAIWKHSEANS 47
            +L+I +S  Q F+FLA PI+LAA+LGG+YEA+W   EA +
Sbjct:   62 ELKIRTSRGQLFLFLASPIILAAALGGVYEALWLSREAKA 101

[Close]

BLAST of mRNA_H-elongata_contig5306.12631.1 vs. uniprot
Match: D7FK19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK19_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 7.080e-5
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:    8 DLEICSSSTQRFVFLAMPIVLAASLGGIYEAIWKHSEANS 47
            +L+I +S  Q F+FLA PI+LAA+LGG+YEA+W   EA +
Sbjct:   62 ELKIRTSRGQLFLFLASPIILAAALGGVYEALWLSREAKA 101

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig5306.12631.1 vs. uniprot

BLAST of mRNA_H-elongata_contig5306.12631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G5Y8_ECTSI	1.140e-8	36.84	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KG64_9PHAE	1.890e-5	55.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FK19_ECTSI	7.080e-5	55.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..82
None	No IPR available	TMHMM	TMhelix		coord: 20..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig5306	contig	H-elongata_contig5306:9010..9255 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig5306.12631.1	mRNA_H-elongata_contig5306.12631.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig5306 9010..9255 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig5306.12631.1 ID=prot_H-elongata_contig5306.12631.1|Name=mRNA_H-elongata_contig5306.12631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
FKFNLKGDLEICSSSTQRFVFLAMPIVLAASLGGIYEAIWKHSEANSRKR
HDHDDEAISRDKTGSDVKAPGVFSILNKITSY