prot_H-elongata_contig5299.12627.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5299.12627.1
Unique Nameprot_H-elongata_contig5299.12627.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1396
Homology
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 1054 bits (2726), Expect = 0.000e+0
Identity = 745/1600 (46.56%), Postives = 873/1600 (54.56%), Query Frame = 0
Query:    4 RKAAVVSATRSLQLLLAYLDEAGGRMRAQGQSVHSHCGNQVV----SSTVTIRVQIYQVGMVELDMLSHQTVQSLRLAVANSQGPDWTSADIRLIFKGREL-MNGNTLEARDPLTSQVMSCICDVAVQNTARDGRQTGRQQ-TQRGEGPHMRVPRLQPNLGVSDGRVMSS---GLFCLMHAPAACRLARRVGIQSFKTTNGIFFFFLDAGDEQLNKTTVLASTLQPPRANARLYDSDGEGSNRGCEPNLKGRQGFTPQKRARANSGLSDV-------------------------DGERGTAATVATVPTTRDVAVDG--GEVVSFGSGKNTSTSSPEDVDAEEEVKTAEGLGDF---GRVKDATVATELPLLELEKQSTVDTLFDLMESGQSVTVLVWDLLMKMPTNMSLYNELSSIGLSLGPQNA-----------EESPLALLRGASPSRLLYCLMIVENLFDRDVIT-----------------------------EESMAAPRGNLAA--------------------------------------------------------------------------------------QLWRDRFARCGGIELLVELLLRRDWDATNGRRR-GGFARG--GDGTIGISLAWLAILLVLLERFLAGGFLPEPRQLGYLLERLPVVLLTTSRCYRELACPWPRDPELYNRGTPTVAAACSPQGKTRHGSPQHSGTVIGGGCKGEFDPLLEAVRAARSCTSIINHLLSLS------------------LEPCAHPGSPSETVDLLTPRGRAGMAMSMISSTAFGEAVREALVRSPSRDLRMNTMSLLASLAAIDSVMAVVEGHNGGNACSREGGGGSPV-----ISLTTTITRLLISLVPYCRLEPDGTKCSDLYALLTEFISKGSGLDLRAICDALPGLPAPLAAPSXXXXXXXXXXXXXXXXXXSGDDGTGAGARNEFGAFCCD--------VDGPLLGSASARERELVGTVVTRLSILAAEDGDRGDMTLEQAIPILVWLIRLIVEPRVTPSDSHLTGLLGLARVIVRSLGSRGKEAVGLEGLALLRRRLSGDNGVQEEGDGVEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPVPPEENLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQR--------AGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGMSVRQWSAYMLIYEREYVLPNSVPLSVLTPT 1396
            RK AVVSATRSLQLLLAYL+EAG RMRAQG SVHSHCGNQ +      T+ +RVQ       E+ +   QTVQ  R+AVA S GP+WT+   RL+++GRE+  +  TLE +  L   ++     +  Q + +    T R + T R   P     +  P +     R  S    G      AP +   A+R   ++            DA D    K    A       A  R +   G G                            D+                                A  A  P  + V   G  G +  F SG   ++S  E+V +   V    G G     G +K  T  +ELPLLELEKQSTVDTLF+LMESGQSV+VLVWDLLMKMPTNM L+N   SIGL+ GP  A           E  PL+LL+ AS SRLLY LMIVE+L  RD+ T                             E +  A    LAA                                                                                      + WRDRF   GGI+ LVEL+L RDWDAT G R  GG  RG  G+ T  ISLA LA+LLVLLERF+  G+LPEPRQL  L+ERLPV+L TT RCYRELA P          G  +                           KG+FDPL+E VRAARSC++II +LL+L                                 + LT   RAGMAM+M+SSTAFGEAVREALVR+PSR+LR N M ++A+LA ID  +A       G A + EG           +S TT + +LLISLVPY R EPDG KC +LY LL++F+SKG+ +D  A+C  LP L        XXXXXXXXXXXXXXXXXX                            +DGPL   ASA ERE   T V  LS   A DG      L Q +P+LVWL+RLIV+PR T +D+HL+GLLGLAR+++  LG RGKEAVGL GL  +            EG  V   G    GLLHHVYHECLFDIAT + HGPLAPPKCRSE CRANAFGLLT+LAT CRAN+ VLI+LLL                       +  P P        SA++    G    VER SWAYAPRQ DKA CG+VGLQNLGATCYMNSLLQQLFMVPALRFGV+SCDPF RT E+   G   VP EENLL QLQDVDEFL+VFLDRLETQL  LPQRRLLQHVFGGQLCNQLIG E+ CPHVSER EDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQC++KRDTLKRTCI RLPNVLFLHLKRFEFDM +MRKVKVND CEFP EL+MRPYTKEGL  +              G++ +     E EG        FPD+YYEYKLAGVLVH GTADSGHYYSYIK+R TQGGG      SWF FNDA VTPFDP +L  +C+GGY+I+  GRG + +Q+SAYMLIYERE++LPN  P +  +PT
Sbjct:  296 RKTAVVSATRSLQLLLAYLEEAGDRMRAQGLSVHSHCGNQQLLQHSRGTMAVRVQPSGGKETEVQVFPGQTVQCFRVAVAISLGPEWTAGTTRLLYRGREMDADDKTLEEQGVLEGSMVHAAKRLTPQTSEQRTTITPRTKLTLRVRPPQPDGEKATPTVLRPVSREPSEAADGAGSSPAAPGSPPAAQRGRKRAASC---------DAADPAPRKDLAAAGA-----APGRAWKGSG-GXXXXXXXXXXXXXXXXXXXXXXXXXXXMDIRTSXXXXXXXXXXXXXXXXXXXXXXXSSPSRKAAAAAEPAEQAVPAQGVPGRLPGFSSGDGDASSPVEEVSSAG-VVAGNGGGSVVVEGCMK-VTPPSELPLLELEKQSTVDTLFELMESGQSVSVLVWDLLMKMPTNMRLFNGFLSIGLTTGPTIARQEHAAAAAAVEGGPLSLLQDASSSRLLYSLMIVEHLLSRDMSTPLLIADVPPSGGNGGERSLEQQQHASGHDESNSVATTVRLAAITAFTGGGGLTESATEIKPGMNGVAGQEPATAGGXXXXXXNSDGDWEVYQPAAFGVGGGACSDFVAGCGGVDVGEVVGVGGAKIGRRTWRDRFVGSGGIDALVELVLTRDWDATRGCRDCGGEERGWPGESTAAISLACLALLLVLLERFMEEGYLPEPRQLTRLMERLPVILFTTCRCYRELAAP--------AAGATSXXXXXXXXXXXXXXXXXXXXXXXXXXSKGDFDPLVETVRAARSCSAIITNLLTLPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQECLTLSARAGMAMTMVSSTAFGEAVREALVRTPSRELRENAMGVMAALAGIDREVA-------GGAGAYEGXXXXXXXXXEFVSQTTVMAQLLISLVPYGRNEPDGAKCRELYQLLSDFLSKGN-VDACALCATLPALRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVDTSFYRIDGPLPAPASADERESASTAVAALSEAVAADGVPA---LAQVVPLLVWLMRLIVKPRATAADAHLSGLLGLARIVIGWLGPRGKEAVGLRGLEGI---------CAAEGGVVGTRG---RGLLHHVYHECLFDIATHDNHGPLAPPKCRSEGCRANAFGLLTDLATDCRANVAVLIDLLLRHXXXXXXXX--XXXXXXXXXXXVKPPKPTR------SASSPDAKGGAGCVERVSWAYAPRQTDKAECGYVGLQNLGATCYMNSLLQQLFMVPALRFGVLSCDPFFRTPEQIEKGEGVVPREENLLYQLQDVDEFLLVFLDRLETQLSGLPQRRLLQHVFGGQLCNQLIGAEAVCPHVSERQEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCNEKRDTLKRTCIARLPNVLFLHLKRFEFDMMEMRKVKVNDKCEFPMELDMRPYTKEGLARQXXXXXXXXXXATSTGTAKVGGSPREEEGE------AFPDSYYEYKLAGVLVHMGTADSGHYYSYIKRRDTQGGGDIPA--SWFCFNDASVTPFDPDSLGMTCHGGYSISPTGRGHTPKQFSAYMLIYEREFILPNPAPPATPSPT 1831          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: A0A6H5KFW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW4_9PHAE)

HSP 1 Score: 620 bits (1598), Expect = 1.580e-185
Identity = 511/1307 (39.10%), Postives = 615/1307 (47.05%), Query Frame = 0
Query:   16 QLLLAYLDEAGGRMRAQGQSVHSHCGNQVV----SSTVTIRVQIYQVGMVELDMLSHQTVQSLRLAVANSQGPDWTSADIRLIFKGREL-MNGNTLEARDPLTSQVMSCICDVAVQNTARDGRQTGRQQTQRGEGPHMRVPRLQPNLGVSDGRVMSSGLFCLMHAPAACRLARRVGIQSFKTTNGIFFFFLDAGDEQLNKTTVLASTLQPPRANARLYDSDGEGSNRGCEPNLKGRQGFTPQKRARANSGLSDVDGERGTAATVATVPTTRDVAVDG--GEVVSFGSGKNTSTSSPEDVDAEEEVKTAEGLGDF---GRVKDATVATELPLLELEKQSTVDTLFDLMESGQSVTVLVWDLLMKMPTNMSLYNELSSIGLSLGPQNA------------EESPLALLRGASPSRLLYCLMIVENLFDRDVIT-----------------------------EESMAAPRGNLAA----------------------------------------------------------------------------------------QLWRDRFARCGGIELLVELLLRRDWDATNGRRR-GGFARG--GDGTIGISLAWLAILLVLLERFLAGGFLPEPRQLGYLLERLPVVLLTTSRCYRELACPWPRDPELYNRGTPTVAAACSPQGKTRHGSPQHSGTVIGGGCKGEFDPLLEAVRAARSCTSIINHLLSLS------------------LEPCAHPGSPSETVDLLTPRGRAGMAMSMISSTAFGEAVREALVRSPSRDLRMNTMSLLASLAAIDSVMAVVEGHNGGNACSREGGGGSPV---ISLTTTITRLLISLVPYCRLEPDGTKCSDLYALLTEFISKGSGLDLRAICDALP----------------GLPAPLAAPSXXXXXXXXXXXXXXXXXXSGDDGTGAGARNEFGAFCCDVDGPLLGSASARERELVGTVVTRLSILAAEDGDRGDMTLEQAIPILVWLIRLIVEPRVTPSDSHLTGLLGLARVIVRSLGSRGKEAVGLEGLALLRRRLSGDNGVQEEGDGVEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTG-------------------------------------VERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPVPPEENLLCQLQ 1106
            QLLLAYL+EAG RMRAQG SVHSHCGNQ +     S + +RVQ       E+ +   QTVQSLR+AVA S GP+WT+   RL+++GRE+  +  TLE      +  +               R   R+ ++  +G                GR  ++   C    PA  +    VG+   +   G                           A +   ++                                               P  + V   G  G +    SG N   S P ++ +   V    G G     G +K AT  +ELPLLELEKQSTVDTLF+LMESGQSV+VLVWDLLMKMPTNM L+N   SIGL+ G   A            E  PL+LL+ AS SRLLY LMIVE+L  RD+ T                             E +  A    LA                                                                                         + WRDRF   GGI+ LVEL+L RDWDAT G R  GG  RG  G+ T  ISLA LA+LLVLLERF+  G+LPEPRQL  L+ERLPV+L TT RCYRELA P          G  +  ++  P    RH +   + T I    KG+FDPL E VRAARSC++II +LL+L                                 + LT   RAGMAM+M+SSTAFGEA REALVRSPSR+LR N M ++A+LA ID  +A       G A + EGG        +SLTT + +LLISLVPY R EPDG +C +LY LL++F+SKG  +D RA+C  LP                GLP+P A+    XXXXXXXXXXXXXXXX                    +DGPL   A A ERE   T V  LS   A DG      L Q +P+LVWL+RLIV+PRVT +D+HL+GLLGLAR+++  LG RGKEAVGL GL           G+    +GV    G   GLLHHVYHECLFDIAT + HGPLAPPKCRSE CRANAFGLLT+LAT CRAN+ VLI+LLL                                                                                       VER SWAYAPRQ DKA CG+VGLQNLGATCYMNSLLQQLFMVPALRFGV+SCDPF RT E+   G   VP EENLL QLQ
Sbjct: 1575 QLLLAYLEEAGDRMRAQGLSVHSHCGNQQLLQHSRSMMAVRVQSSGGKETEVQVFPGQTVQSLRVAVAISLGPEWTAGTTRLLYRGREMDADDKTLEPDGETATPTVL--------------RPVSREPSEEADGAGSSPAARGSPAAAQRGRKRAAS--CDTADPAPRKGLAAVGVAPGRAWKGSGXXXXXXXXXXXXXXXXXXXXXXXXXATSMDIETSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE------PAEQAVPAQGVPGRLPGCSSG-NGDASLPVEMSSAG-VVAGNGGGSVVVEGCMK-ATPPSELPLLELEKQSTVDTLFELMESGQSVSVLVWDLLMKMPTNMRLFNGFLSIGLTTGSTIARQGHAAAAAAAVEGGPLSLLQDASSSRLLYSLMIVEHLLSRDISTPLLVADVPPGGGNGGERSVGQQQHASEHDESNSVATAVRLATIAAFTGGGGLTESAPEMKPGMNGVTGQEPATAXXXXXXXXXXXSDGDWEVYQPAAFSVGGGASGDFVAGCGVLDVGEVVGGGGAKIGRRTWRDRFVGSGGIDALVELVLTRDWDATRGCRDCGGEGRGWPGESTAAISLACLALLLVLLERFMEEGYLPEPRQLTRLMERLPVILFTTCRCYRELAAP--------AAGATSGTSSMRP----RHPAAAAATTTIATASKGDFDPLEETVRAARSCSAIITNLLTLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQECLTLSARAGMAMTMVSSTAFGEAAREALVRSPSRELRENAMGVMAALAGIDREVA-------GEAGAYEGGXXXXXXEFVSLTTVMAQLLISLVPYGRNEPDGARCRELYQLLSDFLSKGD-VDARALCATLPALRPXXXXXXXXXXGSGLPSPHASGENAXXXXXXXXXXXXXXXXXX-----XXXXXHVDTSFYSIDGPLPAPAPADEREFASTAVAALSEAVAADGVPA---LAQVVPLLVWLMRLIVKPRVTAADAHLSGLLGLARIVIGWLGPRGKEAVGLRGL----------EGICAAEEGVVGTRGM--GLLHHVYHECLFDIATHDNHGPLAPPKCRSEGCRANAFGLLTDLATDCRANVAVLIDLLLRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCVERVSWAYAPRQTDKAECGYVGLQNLGATCYMNSLLQQLFMVPALRFGVLSCDPFFRTPEQIEKGEGVVPREENLLYQLQ 2816          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: A0A7S1BNC6_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNC6_9STRA)

HSP 1 Score: 375 bits (962), Expect = 6.470e-103
Identity = 222/536 (41.42%), Postives = 285/536 (53.17%), Query Frame = 0
Query:  914 AVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPVPPEENLLCQLQ-------------------------------------DVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQ----RRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGMSVR--------QWSAYMLIYEREYV-------LPNSVPLSVL 1393
            ++  LL HV+++CLFD+   E    + PPKC++   R  AF L+  L + C  N+ ++I L+L Q     P      D+SD                                     W + P   DK  CG+VGL NLGATCYMNSLLQQ FM+P LRFG+++ D     E  K+      P EENLL QLQ                                     DVDEF  +F+D+LET L+ + ++ LL+ +FGG++CNQ+I QE  C H SER ED  VL LDVKGK+S+ ESL LYVEGE+L G+NK+ C  C  KRD+LKR CI  LPN L LHLKRFEFD+E MRKVKVND CEFP EL+M  YTKE +  R     ++Q  G                         YY++ L GVLVHTGTADSGHYYS+IK+R           E W+ FND  VTPFDP+ +P++C+GG  ++     +S +        Q+SAY+LIYER YV       + NS PLS L
Sbjct: 2582 SLSALLQHVFNQCLFDLPVAEHAASINPPKCKTSKSRQAAFHLIVTLCSRCPENIELVIELILAQQKVDKPR----TDLSD-------------------------------------WNWNPLAKDKNACGYVGLGNLGATCYMNSLLQQFFMIPPLRFGLLAADSTKVEEAGKL------PTEENLLYQLQLLFGNLLLSEKKYFDTRGLCNAYKDFDGQPLNPGEQQDVDEFFSIFMDKLETSLKPMKEKNLLKDIFGGEICNQIICQE--CKHQSERCEDCLVLSLDVKGKKSVLESLDLYVEGEMLDGENKYFCENCSGKRDSLKRACISTLPNTLILHLKRFEFDLEIMRKVKVNDCCEFPMELDMSLYTKEFIEARHEDVTKKQALG-------------------------YYQFNLKGVLVHTGTADSGHYYSFIKERHKG--------EEWYCFNDGSVTPFDPSTMPSTCFGGTKVSHKFDPLSQKMIPNETPKQYSAYLLIYERNYVEFQDNSNIKNSRPLSTL 3035          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: L8GPA8_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPA8_ACACA)

HSP 1 Score: 359 bits (922), Expect = 5.500e-98
Identity = 210/526 (39.92%), Postives = 290/526 (55.13%), Query Frame = 0
Query:  888 LALLRRRLSGDNGVQEEGDGVEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGV-----------EPVPPEENLLC--------------QLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGG---YTINANGRGMSVRQW-----SAYMLIYER 1380
            ++LL+  +S D  ++ +      H G   GL+H ++H+CLF+I T E+HGP APP+C++ S R  AF LLTELA   + N   L +LL++QH                                              G +R+ W Y P   +KA CG+VGL+NLGATCYMNSL+QQ FM+P  R+G++        +EE +L             E    +    C              Q QD DEF+ + LDRLE+ L+   + +LL   FGG L NQ+I ++  C HVSER E+FF L LD+K K+SI ESL LYVEG++L GDNKF C++C+ K D LKR C+  LP+ L +HLKRFEFD+E M+++K+ND C+FP  L+M PYTKEGL                  A+ EG++     +  ++YY+Y+LAG+LVHTGTAD GHYYS+I++R  +  G       W+ FND LV PFDP  +P +C+GG    T      G  V +W     +AYML Y+R
Sbjct: 1286 MSLLKTLVSAD--LEFKNKAGSQHRG---GLVHELFHKCLFNIPTMERHGPDAPPQCKTSSTRNCAFRLLTELADSTQENYAALADLLVQQHR--------------------------------------------DGEKRSLWKYQPSAYEKAACGYVGLKNLGATCYMNSLMQQFFMIPGFRWGMLEVQDSEEKKEESLLWQLQTIFGYLQESEKKYYDTRPFCSSYKDWEGQPMNVGQQQDADEFMNMLLDRLESILKKTQEEKLLSQFFGGALSNQIISKD--CTHVSEREENFFTLSLDIKNKKSILESLALYVEGDMLEGDNKFHCSECNAKVDALKRCCVKNLPDNLIVHLKRFEFDLETMKRIKLNDSCQFPMILDMEPYTKEGL------------------AKKEGTSLEDLPQRDESYYKYELAGILVHTGTADYGHYYSFIRERLPKVAGEAC---KWYQFNDTLVEPFDPEEIPKTCFGGADTVTEWDEVAGKHVPKWRAKTYNAYMLFYQR 1739          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: A0A7S4ITW2_9EUKA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ITW2_9EUKA)

HSP 1 Score: 325 bits (832), Expect = 4.260e-96
Identity = 193/465 (41.51%), Postives = 249/465 (53.55%), Query Frame = 0
Query:  941 PPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSC-----------------------DPFSRTEEEKMLGVEPVPPEENLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAE-FPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGMSVRQWSAYMLIYERE 1381
            PPKC+ +  R   +GLL ELA   +    + I  LL  H   S                    VP S                        W Y P    K+PCG+VGLQNLGATCYMNSLLQQL+M+P  R G++S                        +   R  E K    E      N   Q+ D DEF  +  DRLET  +  PQ  LL+ +FGG +CNQ+I +E  C HVSER E F+ L + VKGK S+ ESL+LYVEG++L GDNK+ C++CD+K   LKR CI  LPN L +H+KRFEFD+E+MR++KVND+C+FP +LN+ PYTKEGL  R                E+E  N  T     PD+YY+Y+LAG+LVHTGTADSGHYYS+IK R         G + W+ FND  V  FD  ++P  C+GGY   +    +  R  +AYML Y+R+
Sbjct:    8 PPKCKHKVSRQVGYGLLLELAKDNQDTWKLAIQKLLAHHETCS--------------------VPQS------------------------WNYYPSTLVKSPCGYVGLQNLGATCYMNSLLQQLYMIPNFRCGILSLPHDDESTHGSFVFQFKRLFGFLQESAKRYYETKQF-CESYSDNFNPTIQM-DADEFFAMLFDRLETVTKDTPQATLLRDIFGGTVCNQVISKE--CEHVSERQEPFYSLSVTVKGKSSLEESLELYVEGDMLEGDNKYQCSKCDKKVTALKRCCIESLPNTLIVHMKRFEFDLEEMRRMKVNDHCKFPFDLNVEPYTKEGLARR----------------EAEADNRDTQPRPHPDSYYQYELAGILVHTGTADSGHYYSFIKNR--------KGYQ-WYQFNDTFVDTFDKGDIPRQCFGGYETKSYDNSVRARINNAYMLFYQRK 399          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: A0A7S2RGE2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RGE2_9STRA)

HSP 1 Score: 343 bits (879), Expect = 1.380e-92
Identity = 218/561 (38.86%), Postives = 293/561 (52.23%), Query Frame = 0
Query:  887 GLALLRRRLSGDNGVQEEGDGVEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTS-----WAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSC----------DPFSRTEEE-------------------------------------------KMLGVEPVPPEENLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINA--------NGRGMSVRQWSAYMLIYERE 1381
            GL    ++     G QE     + HG     L+++V+  CLF I   + +G L  PKCRS  CR   F LL E + GC  NL  + +L+  QH  T         + D L+      +P+S  V Y           G   E+       W YAP    KA CG+VGL+NLG TCYMNSLLQQLFM+P  R+ ++            D  + TE +                                           K L +    P +  + +  DVDEF  V +D+LE  L+      +++ +FGG LCNQ+I +E  C H SER E+F V  L+VKGK SI +SL LYVEGE+L GDNK+LC +C++KRD  KR C ++LP VL +HLKRFEFD+E +RK+KVND+CEFP +++M+ YTKEGL      + AG +S ND              E  D YY+Y+L G+LVHTGTADSGHYYSYIK+R   GG        WF FND  VTPFD +++P +C+GG   +         +    S + +SAY+LIYER+
Sbjct: 1628 GLLQTTKKCLSALGTQEARTLAQSHG-----LINYVFEICLFQI---DDYG-LKSPKCRSRQCREAGFALLLEASDGCNDNLKRMFSLIEAQHKQTDLGPGILAGLVDYLK------MPSSKMVIYEP---------GRNREKIRDRERLWHYAPSPQSKADCGYVGLRNLGCTCYMNSLLQQLFMIPRFRYSILGSKDSGKRLLEKDSSNSTESDVEAERXXXXXREQHKELLYQTMRMFSYLQESEKKFYDTAEFCAKSLSLNHGQPVD--IFEQHDVDEFFNVLMDQLERALELKTDPHVMRDLFGGVLCNQIICREG-CNHRSEREENFMVCQLEVKGKLSIKQSLDLYVEGELLEGDNKYLCGECNEKRDAQKRACFVKLPQVLIMHLKRFEFDLELLRKIKVNDHCEFPMDIDMKKYTKEGL-----EEEAGLASPNDQQ------------EKDDEYYQYELKGILVHTGTADSGHYYSYIKERYPVGGRTDC---EWFCFNDESVTPFDTSSIPQNCFGGLDCSMQWDPSQAKHNESWSPKPFSAYLLIYERK 2141          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: F4PHI7_CAVFA (Ubiquitinyl hydrolase 1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PHI7_CAVFA)

HSP 1 Score: 335 bits (860), Expect = 2.920e-90
Identity = 198/505 (39.21%), Postives = 269/505 (53.27%), Query Frame = 0
Query:  918 LLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPV------------PPEE------------NLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGAT---AAEF-----------PDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGM----SVRQWSAYMLIYER 1380
            L+  ++H+CLFDIAT E HGPL PPKC+++  R   F LL ELA  C  N + L+ LL+ Q+                                                +R  W Y P   +K+ CG+VGL+NLGATCY+NSL+QQLFM+PA R+ ++  D  + T E  +  ++ +             P++            N+  Q+ DVDEF  +  DRLE QL+     +LL   FGG   NQ I QE  CPHVSER E F+ + ++VK KR I ESLQL+VE E L GDNK+ C+QC QK   L R C+ +LPN L LH KRFEFD++ MR+ K+ND   FP  L+M PYTKE L  ++  ++              G +G+T   AAE            P +YY+Y+L+G+LVH+GTADSGHYYS+IK+R      G      W  FND L   F+P ++  +C+GGY    N +G+    + R  +AYML YER
Sbjct: 1278 LVGEIFHQCLFDIATAENHGPLCPPKCKTKESRDVCFTLLLELAKDCAENYSRLVQLLILQNKPDE--------------------------------------------KRALWNYQPTGTEKSGCGYVGLKNLGATCYINSLMQQLFMIPAFRYSILQTDEVNPTNESLLQQLKIIFANLQESEKRSHDPKDFCTAYKYDGQPINVYIQM-DVDEFFNMLFDRLENQLKGTENEKLLNDFFGGSTVNQFISQE--CPHVSEREESFYTVSVEVKNKRDILESLQLFVESETLDGDNKYFCSQCSQKVKCLMRRCVKQLPNTLILHNKRFEFDLDLMRRTKINDALRFPMTLDMAPYTKEYLERKEAIEKEKEKQQXXXXXXXXGESGSTQPAAAELQEEKKSLPQMKPASYYQYELSGILVHSGTADSGHYYSFIKEREPHPASGQQ--RRWIQFNDQLTEIFNPEDIAKACFGGYD-QPNDKGIMGRPTPRYNNAYMLFYER 1732          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: D3BM73_POLPP (Ubiquitin domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BM73_POLPP)

HSP 1 Score: 332 bits (851), Expect = 3.590e-89
Identity = 197/506 (38.93%), Postives = 272/506 (53.75%), Query Frame = 0
Query:  913 GAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPV------------PPEE------------NLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGMS-----VRQWSAYMLIYEREYVLPNSVP 1389
            G  E L+  ++H CLFDIAT E HGPL PPKC++   R   F LL ELA  C  N  +L++LLLEQ+    P +                                          RT W Y P   +K+ CG+VGL+NLGATCY+NSL+QQLFM+PA R+ ++     + T +  +  ++ +             P++            N   Q+ DVDEF  +  DRLE QL+   + +LL   FGG   NQ I QE  CPHVSER E F+ + L+VK KR I +SLQL+VE E L GDNK+ C+QC QK   L R C+ +LPN L +H KRFEFD++ MR+ K+ND  +FP  L+M PYTKE L  ++  +          +A+++G         P +YY+Y+L+G+LVHTG+A+SGHY+SYIK+R     G       W  FND     F+P ++  +C+GGY   +  +G +      R  +AYML YER    P +VP
Sbjct: 1179 GYKEDLITDLFHNCLFDIATAENHGPLCPPKCKNRESRDACFALLLELANNCEENYRMLVSLLLEQN---KPEE-----------------------------------------RRTLWNYLPAGNEKSTCGYVGLKNLGATCYINSLMQQLFMIPAFRYSIIQAQEANPTPDSLLYQLKIIFANLQESEKKSHDPKDFCMAYKYEGQPLNTYVQM-DVDEFFNMLFDRLENQLKGTKEEKLLSEFFGGASVNQFISQE--CPHVSEREEPFYTISLEVKNKRDILDSLQLFVESETLDGDNKYFCSQCSQKVKCLMRRCVKKLPNTLIIHNKRFEFDLDLMRRTKLNDQLKFPMSLDMAPYTKECLERKEAIE----------NAKAKGLPIPDIPTHPASYYQYELSGILVHTGSAESGHYHSYIKERQPLIPGQ---PRRWIQFNDHSTEIFNPEDISKACFGGYDHISMDQGKTNVRTTPRYNNAYMLFYERTN--PEAVP 1622          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: A0A2P6NWC5_9EUKA (Ubiquitinyl hydrolase 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NWC5_9EUKA)

HSP 1 Score: 332 bits (851), Expect = 3.620e-89
Identity = 202/511 (39.53%), Postives = 265/511 (51.86%), Query Frame = 0
Query:  908 VEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDPF-SRTEEEKMLGVEPVPPEENLLCQLQ-----------------------------DVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGMSVRQW--------SAYMLIYER 1380
              +HG    G+   ++  CLFD  T E HGPLAPPKC++ + R  A+ LL E+  G         ++ + +HL             DLL               YP    +  W         +W Y P   +K+  G+VGL+NLGATCYMNSL+QQL+MVP  R+ +MS   F S +E+E  L    +   + +L  LQ                             D DEF  +  DR E  L+ L +  LL   FGG +CNQ+I +E  C HVSER E +F L LDVKGKRSI ESL  YV+GE+L GDNK+ C+QCD+K D +KRTCI +LP+ L +H KRFEFD+E MR++KVNDY EFP E+N+ PYT EGL  R                  EGS+   +       Y+Y LAG+LVHTGTAD GHYYS+I++R    G        W+ FND  V  +DP  +PA+C+GG          + R          +AYML YER
Sbjct: 1261 AHEHG---HGMFDELFRRCLFDTPTAEDHGPLAPPKCKTATSRRAAYDLLVEITKG---------SVSIFEHLC------------DLL---------------YPFHQQVDKW--------NNWGYIPAAHEKSESGYVGLRNLGATCYMNSLMQQLYMVPQFRYSIMSVPLFDSISEDETQLKENTLYQMQTMLSYLQESERKYYDTRGFVSSYKFDGQPVDPQVQMDADEFFNMIFDRFENLLKPLKKESLLNDYFGGTVCNQIISKE--CSHVSERDESYFTLSLDVKGKRSIYESLASYVQGELLEGDNKYHCSQCDKKVDAIKRTCIKKLPDNLIIHAKRFEFDLELMRRIKVNDYFEFPHEVNLEPYTLEGLNRR------------------EGSSENVSVSTDIDSYKYHLAGILVHTGTADGGHYYSFIREREAADGK----ERKWYQFNDTDVEQWDPKEIPAACFGGSDTVMQWDNQTARNVPRNFDKMNNAYMLFYER 1700          
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Match: UPI000644EBF2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EBF2)

HSP 1 Score: 328 bits (842), Expect = 4.750e-88
Identity = 195/506 (38.54%), Postives = 266/506 (52.57%), Query Frame = 0
Query:  918 LLHHVYHECLFDIATDEKHGPLAPPKCRSESCRANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSISTPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQNLGATCYMNSLLQQLFMVPALRFGVMSCDP-----------------FSRTEEEKMLGVEPVP---------PEENLLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESECPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQKRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRPYTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGVLVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLPASCYGGYTINANGRGM-----SVRQWSAYMLIYEREYVLPNSVPLSV 1392
            L+  V+HECLF+IAT + HGPL PPK +S+  R   F LL ELA  C  N   L+  L+EQ+                                                 R+ W Y P   +K+ CG+VGL+NLGATCY+NSL+QQLFM+P  R+ ++  +                  F+  +E +    +P              N   Q+ DVDEF  +  DRLE QL+   + +LL   FGG   NQ I QE  C HVSER E F+ + ++VK K+ ITESLQL+VE E L GDNK+ C+QC QK   L R CI  LPN L +H KRFEFD++ M++ K+ND  +FP  L+M PYTKE L G++  ++A +++L               A  P +YY+Y L+G+LVH+GTADSGHYYS+IK+R     G       W  FND L   F+P ++  +C+GGY   +  +G      S R  +AYML YER +V+ N+    V
Sbjct: 1253 LIQEVFHECLFNIATADNHGPLCPPKAKSKDSRDACFALLLELANNCEENYKELVLQLIEQNKPDE--------------------------------------------RRSVWNYFPMGNEKSSCGYVGLKNLGATCYINSLMQQLFMIPGFRYSILQAEDSATNANPDSLLYQLKIIFANLQESEKKSHDPKDFCLAYKYEGQPINTYVQM-DVDEFFNMLFDRLENQLKGTKEEKLLNQFFGGASVNQFISQE--CAHVSEREEPFYTISVEVKNKKDITESLQLFVESETLDGDNKYFCSQCSQKVKCLMRRCIKSLPNTLIIHNKRFEFDLDTMKRTKLNDALKFPMTLDMTPYTKEYLEGKEAVEKAKANNLPIPKD--------LPAMQPASYYQYDLSGILVHSGTADSGHYYSFIKEREPLIPGR---PRHWIQFNDQLTEVFNPEDISRACFGGYDSISLDQGKTNIRTSQRNNNAYMLFYERSHVVNNTTTTPV 1700          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5299.12627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK75_ECTSI0.000e+046.56Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFW4_9PHAE1.580e-18539.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1BNC6_9STRA6.470e-10341.42Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
L8GPA8_ACACA5.500e-9839.92Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba caste... [more]
A0A7S4ITW2_9EUKA4.260e-9641.51Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A7S2RGE2_9STRA1.380e-9238.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
F4PHI7_CAVFA2.920e-9039.21Ubiquitinyl hydrolase 1 n=1 Tax=Cavenderia fascicu... [more]
D3BM73_POLPP3.590e-8938.93Ubiquitin domain-containing protein n=1 Tax=Polysp... [more]
A0A2P6NWC5_9EUKA3.620e-8939.53Ubiquitinyl hydrolase 1 n=1 Tax=Planoprotostelium ... [more]
UPI000644EBF24.750e-8838.54hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1039..1382
e-value: 1.8E-74
score: 252.8
NoneNo IPR availablePANTHERPTHR24006:SF692UBIQUITIN-SPECIFIC PEPTIDASE 9coord: 934..1381
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 934..1381
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 501..1396
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..500
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..12
score: 0.474
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 1047..1087
e-value: 2.0E-7
score: 30.8
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 1104..1378
e-value: 1.3E-28
score: 100.2
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 1295..1312
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 1048..1063
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 49..107
score: 10.07
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1047..1381
score: 42.721
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 46..110
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1042..1382

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5299contigH-elongata_contig5299:681..11269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5299.12627.1mRNA_H-elongata_contig5299.12627.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5299 681..11269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5299.12627.1 ID=prot_H-elongata_contig5299.12627.1|Name=mRNA_H-elongata_contig5299.12627.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1396bp
RRQRKAAVVSATRSLQLLLAYLDEAGGRMRAQGQSVHSHCGNQVVSSTVT
IRVQIYQVGMVELDMLSHQTVQSLRLAVANSQGPDWTSADIRLIFKGREL
MNGNTLEARDPLTSQVMSCICDVAVQNTARDGRQTGRQQTQRGEGPHMRV
PRLQPNLGVSDGRVMSSGLFCLMHAPAACRLARRVGIQSFKTTNGIFFFF
LDAGDEQLNKTTVLASTLQPPRANARLYDSDGEGSNRGCEPNLKGRQGFT
PQKRARANSGLSDVDGERGTAATVATVPTTRDVAVDGGEVVSFGSGKNTS
TSSPEDVDAEEEVKTAEGLGDFGRVKDATVATELPLLELEKQSTVDTLFD
LMESGQSVTVLVWDLLMKMPTNMSLYNELSSIGLSLGPQNAEESPLALLR
GASPSRLLYCLMIVENLFDRDVITEESMAAPRGNLAAQLWRDRFARCGGI
ELLVELLLRRDWDATNGRRRGGFARGGDGTIGISLAWLAILLVLLERFLA
GGFLPEPRQLGYLLERLPVVLLTTSRCYRELACPWPRDPELYNRGTPTVA
AACSPQGKTRHGSPQHSGTVIGGGCKGEFDPLLEAVRAARSCTSIINHLL
SLSLEPCAHPGSPSETVDLLTPRGRAGMAMSMISSTAFGEAVREALVRSP
SRDLRMNTMSLLASLAAIDSVMAVVEGHNGGNACSREGGGGSPVISLTTT
ITRLLISLVPYCRLEPDGTKCSDLYALLTEFISKGSGLDLRAICDALPGL
PAPLAAPSVSSPYSSSSPSDPVSVSSSGDDGTGAGARNEFGAFCCDVDGP
LLGSASARERELVGTVVTRLSILAAEDGDRGDMTLEQAIPILVWLIRLIV
EPRVTPSDSHLTGLLGLARVIVRSLGSRGKEAVGLEGLALLRRRLSGDNG
VQEEGDGVEDHGGAVEGLLHHVYHECLFDIATDEKHGPLAPPKCRSESCR
ANAFGLLTELATGCRANLTVLINLLLEQHLATSPYKPPCNDMSDLLRGSI
STPVPASAEVEYPSAATLSGWGIGTGVERTSWAYAPRQADKAPCGFVGLQ
NLGATCYMNSLLQQLFMVPALRFGVMSCDPFSRTEEEKMLGVEPVPPEEN
LLCQLQDVDEFLVVFLDRLETQLQSLPQRRLLQHVFGGQLCNQLIGQESE
CPHVSERLEDFFVLGLDVKGKRSITESLQLYVEGEVLAGDNKFLCAQCDQ
KRDTLKRTCILRLPNVLFLHLKRFEFDMEQMRKVKVNDYCEFPTELNMRP
YTKEGLLGRQRRQRAGSSSLNDGHAESEGSNGATAAEFPDAYYEYKLAGV
LVHTGTADSGHYYSYIKQRGTQGGGGGAGLESWFTFNDALVTPFDPANLP
ASCYGGYTINANGRGMSVRQWSAYMLIYEREYVLPNSVPLSVLTPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR000626Ubiquitin_dom
IPR028889USP_dom
IPR029071Ubiquitin-like_domsf
IPR038765Papain-like_cys_pep_sf