prot_H-elongata_contig52872.12609.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52872.12609.1
Unique Nameprot_H-elongata_contig52872.12609.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length360
Homology
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BLAST of mRNA_H-elongata_contig52872.12609.1 vs. uniprot
Match: D7G2A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2A1_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 5.720e-54
Identity = 172/429 (40.09%), Postives = 205/429 (47.79%), Query Frame = 0 
Query:    1 WHDELWATVEKRIMEDLLE-----------IESRLAGAEGSGRATSDS---DSKRASALESQERALSNEQWNKARAVATTSEVFKAMSRTGAGGDAYFALVALFCTADKLVVPVACQESPIEVDFFCHHQQQQQKGWTKNSPKPKGRES----SVG---GAGRTEAGGVHVMVTIPSTFDIYLRDGQVKKGASAGSGG---------------RNGGAGDLGXXXXXXXXGSNKKNSGD--ATTDVSVALHLVRVRAVVEEEICVVGLDKRSPPEASFPALSSMADSRSDGTSSSQSTFAGSPAVSVDRGAGRIPSNVNQGLSEGRHANPGRKASDGSSSETSETPAPAFP---------------------------------ALTRTERRMRVTLVPEPSVVGEMVRNFSRTFGVEVSDPEPPRVLG 358
            WH+ELWAT+E R+ME +L                    + +GR ++D        A A+  + RAL+ E+WNKARAVATTSEVFKAMSRTGAGGDAYFALVALFCTADKLVVPV CQESPI V+F        +          +GR S    S G   GAG+ +   VHV+VT+PSTFDIYLRDG     A  G+ G               R        X        S+  ++GD  A  D S ALHLVRV+AVVEEEI   GL +     +         +   DGT                      P  +   L   RH    R+ S GS       PA A                                   ALTRTERRM VT+VPEPS V EMVR+FSR  GV+V  P+PPRVLG
Sbjct:  255 WHEELWATLEARVMESVLSGXXXXXXXXXXXXXXXXXXKSNGRGSTDEAVGGRGAAPAVGDKARALALEEWNKARAVATTSEVFKAMSRTGAGGDAYFALVALFCTADKLVVPVHCQESPITVEFL------NRSSAAAGGKGARGRRSKERLSFGKKKGAGKGKGDDVHVLVTVPSTFDIYLRDGGT---AGEGADGXXXXXXXXXXXXXXXRXXXXXXXXXKIHRKSSTSSNHSNGDGAAAADASNALHLVRVKAVVEEEIW--GLGRAGGGMSXXXXXXXXXE---DGT----------------------PPTLRFLLDPERH---NRRTSAGSGGWPDAPPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLALTRTERRMAVTVVPEPSAVSEMVRSFSRKIGVDVPSPQPPRVLG 644
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52872.12609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2A1_ECTSI5.720e-5440.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52872contigH-elongata_contig52872:2390..3469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52872.12609.1mRNA_H-elongata_contig52872.12609.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52872 2390..3469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52872.12609.1 ID=prot_H-elongata_contig52872.12609.1|Name=mRNA_H-elongata_contig52872.12609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=360bp
WHDELWATVEKRIMEDLLEIESRLAGAEGSGRATSDSDSKRASALESQER
ALSNEQWNKARAVATTSEVFKAMSRTGAGGDAYFALVALFCTADKLVVPV
ACQESPIEVDFFCHHQQQQQKGWTKNSPKPKGRESSVGGAGRTEAGGVHV
MVTIPSTFDIYLRDGQVKKGASAGSGGRNGGAGDLGRGGSGKGGGSNKKN
SGDATTDVSVALHLVRVRAVVEEEICVVGLDKRSPPEASFPALSSMADSR
SDGTSSSQSTFAGSPAVSVDRGAGRIPSNVNQGLSEGRHANPGRKASDGS
SSETSETPAPAFPALTRTERRMRVTLVPEPSVVGEMVRNFSRTFGVEVSD
PEPPRVLGS*
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