prot_H-elongata_contig52740.12588.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52740.12588.1
Unique Nameprot_H-elongata_contig52740.12588.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
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BLAST of mRNA_H-elongata_contig52740.12588.1 vs. uniprot
Match: A0A6H5L606_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L606_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-7
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0 
Query:    1 MTGRMTSVVRGRERPSTRFAMRLVARGEDKGI 32
            MTGRMTSV RG+ERPSTRFAMRLVARGE  G+
Sbjct:  521 MTGRMTSVERGQERPSTRFAMRLVARGERIGL 552
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52740.12588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L606_9PHAE2.590e-784.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52740contigH-elongata_contig52740:3102..3215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52740.12588.1mRNA_H-elongata_contig52740.12588.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52740 500..3215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52740.12588.1 ID=prot_H-elongata_contig52740.12588.1|Name=mRNA_H-elongata_contig52740.12588.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
MTGRMTSVVRGRERPSTRFAMRLVARGEDKGITSYRE*
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