prot_H-elongata_contig52672.12581.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52672.12581.1
Unique Nameprot_H-elongata_contig52672.12581.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length340
Homology
BLAST of mRNA_H-elongata_contig52672.12581.1 vs. uniprot
Match: A0A6H5JE10_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE10_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-11
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  279 GLGRSGRPSCRAPCECPRCLLEADGD-RSCGGEMLKILADQALEEGRHNTALGLYRSALAA 338
            GL    R   +  C CPRCLLEA GD R CG E LK+LADQALEEGRH  ALGLYR++LAA
Sbjct:  353 GLSSLQRQPPQLVCNCPRCLLEAGGDHRLCGRETLKVLADQALEEGRHEAALGLYRASLAA 413          
BLAST of mRNA_H-elongata_contig52672.12581.1 vs. uniprot
Match: D8LR24_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR24_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.100e-11
Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:  279 GLGRSGRPSCRAPCECPRCLLEADGD-RSCGGEMLKILADQALEEGRHNTALGLYRSALA 337
            GL    R   +  C CPRCLLEA GD R CG E+LK+LADQALEEGRH  ALGLYR++LA
Sbjct:  169 GLSSLQRQPPQLVCNCPRCLLEAGGDHRLCGREILKVLADQALEEGRHEAALGLYRASLA 228          
BLAST of mRNA_H-elongata_contig52672.12581.1 vs. uniprot
Match: C1MHS0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MHS0_MICPC)

HSP 1 Score: 73.6 bits (179), Expect = 1.320e-10
Identity = 56/159 (35.22%), Postives = 68/159 (42.77%), Query Frame = 0
Query:  175 FPPLSVVGLLPPSCSPEHSCVPNAQLEVTLREKEEEKDTPGNEGLDASDALTATGGGNPSELASALRVGLITLRGVPEGERISAPYVALCQPVEDRRRELSSGSGLGRSGRPSCRAPCECPRCLLEADGDRSCGGEMLKI-----LADQALEEGRHNTA 328
             P L+ + L P +    HSCVPN Q+E  +         PG             GG    E    LRV L+ LR V EGE I+  YV   Q    RRREL    G            C+CPRC LEA    +     LK+     LADQA EE R++ A
Sbjct:  511 LPRLAALALAPGTALLNHSCVPNCQIEARI--------VPG-------------GGDGDDETCGGLRVTLVALRDVAEGEEITTAYVPSNQRYFRRRRELRRRYGFA----------CDCPRCALEASKTSNAPPPNLKVIDWLRLADQAQEEARYDDA 638          
BLAST of mRNA_H-elongata_contig52672.12581.1 vs. uniprot
Match: A0A7R9Y3V3_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y3V3_9VIRI)

HSP 1 Score: 72.0 bits (175), Expect = 3.930e-10
Identity = 63/178 (35.39%), Postives = 79/178 (44.38%), Query Frame = 0
Query:  163 ATSGAPSHRFSPFPPLSVVGLLPPSCSPEHSCVPNAQLEVT---LREKEEEKDTPGNEGLDASDALTATGGGNPSELASALRVGL--ITLRGVPEGERISAPYVALCQPVEDRRRELSSGSGLGRSGRPSCRAPCECPRCLLEADG-DRSCGGEM--LKILADQALEEGRHNTALGLY 332
            AT  A +    P   +  VGL+PP     HSCVPN QLE     L     E+D           A TA GGG     A   RV +  I LR + EGE ++   VA     E R       + +   G PS   PC C RC  E  G D +  G    +++LAD A EEGRH+ A  L+
Sbjct:  316 ATWSADAASLCPLRGVDAVGLMPPEAEMRHSCVPNCQLEARWEPLLATAAERDA----------AATAAGGGEARYDAFRGRVVVDAIALRDIAEGEELTVAMVATNATAEGR------AAAMAARGLPS---PCGCARCTFERAGRDAAAVGAASDVRLLADLATEEGRHDEAAALH 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52672.12581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JE10_9PHAE1.280e-1165.57Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
D8LR24_ECTSI2.100e-1165.00Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
C1MHS0_MICPC1.320e-1035.22Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7R9Y3V3_9VIRI3.930e-1035.39Hypothetical protein n=2 Tax=Prasinoderma colonial... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 177..302
e-value: 1.3E-5
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52672contigH-elongata_contig52672:424..2913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52672.12581.1mRNA_H-elongata_contig52672.12581.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52672 424..2913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52672.12581.1 ID=prot_H-elongata_contig52672.12581.1|Name=mRNA_H-elongata_contig52672.12581.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=340bp
MAYADRAAAPKAEGGAERARTLDFFLRTVRALRRHLAPITVPSPLASYCV
RLFRAADKGAKLRALPLLSPVIESARPNDHGATVERTAAAAKWLVTGDDE
IFSGSASSRDCSCSKGAIGIGTGRKGDGAGAEDRLKPSPDESDAREIAVE
RGLCRLVEAAAAATSGAPSHRFSPFPPLSVVGLLPPSCSPEHSCVPNAQL
EVTLREKEEEKDTPGNEGLDASDALTATGGGNPSELASALRVGLITLRGV
PEGERISAPYVALCQPVEDRRRELSSGSGLGRSGRPSCRAPCECPRCLLE
ADGDRSCGGEMLKILADQALEEGRHNTALGLYRSALAALH
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