prot_H-elongata_contig52616.12568.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52616.12568.1
Unique Nameprot_H-elongata_contig52616.12568.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length377
Homology
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 6.660e-41
Identity = 113/294 (38.44%), Postives = 151/294 (51.36%), Query Frame = 0
Query:  148 EQIMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPH--------------------LPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRFKPVVSSPVA------SAVVDTAG----PPGGVG---IATPKQPSPGAHGSSSSSASTAVGVPVAAANTKGDSLSEVGSKFLVESEGGVSEQSGWTEIGMRG-------------------------------GGVSFVKLTTPVSIPKELDLERFCTNHTANAPDDELGEVILSM 377
            E++MPTTRHFHAEVE TLTCT+C+YSRRR+ELYRDFSLD+P                               +L  LLD FF+ SEL+LRCERC +D+VR EHSLA+LPGAL+LH+KRFKPV S+P        + VVD++     P  G     ++ P        G  S++ + A  +    A+ + D+    G    VE+ G                                              GGVS+VKL +PVS+P ELDLERFC+ +T NAP ++LG+ + S+
Sbjct:  738 ERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXDGGVSELGDLLDNFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHIKRFKPVASAPPPQLPPPKAKVVDSSSEAKLPVAGSAESPLSLPXXXXXXXVGRPSTAPAGAFAI-AGVASPEDDA----GCATAVEAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGGVSYVKLASPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSL 1026          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.450e-37
Identity = 109/305 (35.74%), Postives = 141/305 (46.23%), Query Frame = 0
Query:  133 QGGQADSSNERRSPSEQIMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPH----------------------LPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRFKPVVS----------------------SPVASAV---------------VDTAGPPGGVGIATPKQPSPGAHGSSSSSASTAVGVPVAAANTKGDSLSEVGSKFLVESEGGVSEQSGWTEIGMRG-GGVSFVKLTTPVSIPKELDLERFCTNHTANAPDDELGEVILSM 377
            +GG+ D   E     E++MPTTRHFHAEVE TLTCT+C+YSRRR+ELYRDFSLD+P                                  L  LLD FF+ SEL+LRCERC +D+VR EHSLA+LPGAL+LH+KRFKP  S                      SPVA +                +  AG     G+ +P+  +                                                       R  GGVS+VKL++PVS+P ELDLERFC+ +T NAP ++LG+ + S+
Sbjct:  625 EGGRED--EEALRQKERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXXXDGGVSGLGDLLDSFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHVKRFKPAASAXXXXXXXXXXXXXXXXASEATSPVAGSXXXXXXXXXXXXGRSSIAPAGASATAGVPSPEDDAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGGVSYVKLSSPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSL 927          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A835YKZ9_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.890e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDI---------PHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHS-LAQLPGALILHMKRFK 247
            ++P+ R FHAEV+++L C  C Y+RRR E Y DFSLD+                   ++ LS LL  FF   +L L CERCD+    + H  +  LPG L+LH+KRF+
Sbjct:  618 LLPSARAFHAEVDMSLRCRGCGYTRRRPEPYMDFSLDVVGGGGSXXXXXXXXXXXXXSVPLSRLLARFFARRKLELSCERCDDGGTAIAHYVMGALPGVLVLHIKRFR 725          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A7S0K999_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K999_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.160e-12
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0
Query:  145 SPSEQIMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRFK 247
            SPS  + PT R+F  EVEV+LTC  C Y+R RKELYR  SLD+     G   +   +   +  FF   +L L+CE+C  D    +  +++L   L+LH+KRF+
Sbjct:  370 SPS--LFPTQRNFATEVEVSLTCCSCMYTRTRKELYRHLSLDVV----GNSSSPSVIEDGIRRFFSPQKLCLKCEKCFCDSAIQKMEISKLSNGLLLHLKRFE 466          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A139AWQ4_GONPJ (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AWQ4_GONPJ)

HSP 1 Score: 74.7 bits (182), Expect = 8.400e-11
Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0
Query:  152 PTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLS--GLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRFK 247
            P   +F  E E  L+C  C   RR+KE++RD SLD+P        N + +S   LL  FFK   L  +CE C +++   +  ++++P  L++H+KR++
Sbjct:  519 PVVENFEWEAETVLSCAECGLERRKKEVFRDISLDLPQFKFTRTRNGIGISIRHLLHLFFKVETLYYKCETCPSEKAFAKRRISRVPRVLLVHIKRYQ 616          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A6J0CMF7_PERMB (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Peromyscus TaxID=10040 RepID=A0A6J0CMF7_PERMB)

HSP 1 Score: 64.7 bits (156), Expect = 1.390e-7
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRF 246
            I P   +F  E+  +L C  C  +  RKE     S++IP   +G   N L +    D FFKA EL  RCERC +++    H  ++LP  +I+H+KR+
Sbjct:  426 ICPVANNFEFELLRSLFCKGCGLAVIRKEPSSYLSINIP---QGLKGNNLSIQSSFDLFFKAEELEHRCERCIHNKSIALHKFSRLPRVIIIHLKRY 519          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: D4A5S1_RAT (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Tetrapoda TaxID=32523 RepID=D4A5S1_RAT)

HSP 1 Score: 63.2 bits (152), Expect = 4.300e-7
Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRF 246
            + P T +F  E+  ++ C  C  +  ++E  R  S++IP   +G  +  + +   LD FF+A EL  RCERC  ++    H   +LP  +I+H+KR+
Sbjct:  424 VCPVTNNFEFELLSSIFCKACGLTVFKREPSRYLSINIP---QGMKDQNMSIQSSLDLFFRAEELEHRCERCLYNKSVALHKFGRLPRVIIVHLKRY 517          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: A0A1U7RC27_MESAU (Ubiquitinyl hydrolase 1 n=1 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U7RC27_MESAU)

HSP 1 Score: 62.8 bits (151), Expect = 5.770e-7
Identity = 32/97 (32.99%), Postives = 50/97 (51.55%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRF 246
            + P   +F  E+  ++ C  C  +  +KE     S++IP   +G+    L +    D FFKA EL  RCERC +++    H    LP  +ILH+KR+
Sbjct:  428 VCPVANNFEFELTRSIFCKGCGLAVFKKEQSSYLSINIPQGMKGQN---LSIQSSFDCFFKAEELEHRCERCMHNRSIALHRFGSLPRVIILHLKRY 521          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: UPI00167F87BE (ubiquitin carboxyl-terminal hydrolase 26 n=1 Tax=Onychomys torridus TaxID=38674 RepID=UPI00167F87BE)

HSP 1 Score: 62.4 bits (150), Expect = 7.630e-7
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRF 246
            + P   +F  E+  ++ C  C  +  RKE     S++IP   +G     L +    D FFKA EL  RCERC +D     H  ++LP  +I+H+KR+
Sbjct:  427 VCPVANNFEFELLRSIFCKGCGLAVLRKEPSCYLSINIPQGLKGHN---LSIQSSFDLFFKAEELEHRCERCMHDTSIALHKFSRLPRVIIIHLKRY 520          
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Match: UPI000B4F8F07 (ubiquitin carboxyl-terminal hydrolase 26-like n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F8F07)

HSP 1 Score: 62.0 bits (149), Expect = 1.010e-6
Identity = 29/97 (29.90%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  150 IMPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALDLSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRF 246
            + P   +F  E+  ++ C  C  +  ++E     S++IP   +G+ +  L +    D FF+A E+  RCERC +++    H   QLP  +I+H+KR+
Sbjct:  419 VCPVANNFEFELLSSIFCKACGLTVFKREPSSFLSINIP---QGKKDRKLSIQSSFDLFFRAEEVEHRCERCMHNRSIALHKFCQLPRVIIIHLKRY 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52616.12568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE6.660e-4138.44USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI3.450e-3735.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YKZ9_9STRA2.890e-1440.74USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S0K999_9STRA2.160e-1240.78Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Lept... [more]
A0A139AWQ4_GONPJ8.400e-1133.67Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Gona... [more]
A0A6J0CMF7_PERMB1.390e-736.08Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Pero... [more]
D4A5S1_RAT4.300e-731.96Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Tetr... [more]
A0A1U7RC27_MESAU5.770e-732.99Ubiquitinyl hydrolase 1 n=1 Tax=Mesocricetus aurat... [more]
UPI00167F87BE7.630e-734.02ubiquitin carboxyl-terminal hydrolase 26 n=1 Tax=O... [more]
UPI000B4F8F071.010e-629.90ubiquitin carboxyl-terminal hydrolase 26-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 147..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52616contigH-elongata_contig52616:92..2039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52616.12568.1mRNA_H-elongata_contig52616.12568.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52616 92..2039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52616.12568.1 ID=prot_H-elongata_contig52616.12568.1|Name=mRNA_H-elongata_contig52616.12568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=377bp
INTLHEETQPRLQVAAAAAAASAASVVGKPLRATVSASSQQDLSLDHHGS
LVDENDPRMAVVDLSSEDDHNLLVLKGVKNDVMVMSGSNSSNIGYAGRGA
SVGVSECGERKERASERVVGDAGATGKVATVEQGGQADSSNERRSPSEQI
MPTTRHFHAEVEVTLTCTRCAYSRRRKELYRDFSLDIPHLPEGEGENALD
LSGLLDGFFKASELNLRCERCDNDQVRVEHSLAQLPGALILHMKRFKPVV
SSPVASAVVDTAGPPGGVGIATPKQPSPGAHGSSSSSASTAVGVPVAAAN
TKGDSLSEVGSKFLVESEGGVSEQSGWTEIGMRGGGVSFVKLTTPVSIPK
ELDLERFCTNHTANAPDDELGEVILSM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf