prot_H-elongata_contig5254.12559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5254.12559.1
Unique Nameprot_H-elongata_contig5254.12559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1130
Homology
BLAST of mRNA_H-elongata_contig5254.12559.1 vs. uniprot
Match: D7FWV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV3_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.070e-95
Identity = 442/1243 (35.56%), Postives = 547/1243 (44.01%), Query Frame = 0
Query:    1 MGADTSHLYGVKDAGFKPVTAFKDAQEQCHSGYAGQLQHAFVQGVLNPVGDWQRDLRGLEGKVSAFTSVQVQHDHYRIKVEDLKIKAQQLEARAATRGDSRNAKAAAERLNRNSAKLQEVTKHYNEARENSCQGMNEAWRNRLVRMNNIVSRLIHFQEAYLGEQLMIMLGVSRILE--EAGGKQWGENTEIQAFVSRSDVRLYEGELIRKLRVMNERKWFRLVGSSLEVFDIKDKDDS----YYVVTETPVVTHIVRGVQKVDETSFRVNLA----TGDVGLHLYAMDAADAEGWCKALEKASVWDQLTSTQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGKNXXXXXXXXXXXXXXXXXXXXXGDANEKVPDLLDTTSKIGLGXXXXXXXGAFPAGMTGGGVPGGG--GGPRASGRMGKTMSMMGSSPAGFGGPMRGYSGHSS------------------MXXXXXXXXXPSPSMGDPRLGI-------------------------------PLGGGPPMPSMHSSLLPGMTQSGPPVMMXXXXXXXXXAPVIDPIAPGPQPPHGMMGGPGGPPMMGGPGAGRGGGWNMGNHQ----------------------FVPKFG-SMGGAEKQQGFRRSHSVGAGIPDQMHQGFVSKKSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARN---ADEETKAEEAD--GDDVVPTYVTAPAQAPXXXXXXXVYVRAAATPRKLHPVATTLPTKLPTPKFSTRSFSASSTPRXXXXXTVKTSEDK--------------RIAAISKAATXXXXXXXXXXXXXXTRKTQAPVTETQTPGRTRISSFPKPGSAWKALKKMAATGSTPSPVASGAESKGTTPRAGKD--ERVSRPPDTTTXXXXXXXXXAASPTNAVNDTERTVGGEAAGDEKXXXXXXXXXXXXXXALNLVGSSPASSDSPARSVPSASASN------ERRLAVFKSLSGPSSTGGAKXXXXXXDSIADVSSARASANSXXXXXXXXXXXXXXXXXSRGYETPGSDAKAADQVKVFRRLCVAKTPGASEAESGDAGAGVAAQRAAGRSAEQKLTFDQLMAWDEVQELLDYGSLKEAEVSGIFKEAVRTQGWE-NVGSS--AKTADLWALPGTNKDSRRAMIRAGSGSTDGRSDDEDARPKDALTQKGFMNLVKLIEELQFEKELEQDKGVGLIPGPVYVL 1129
            +G D SH+Y V++ GFKP  AFK+AQ+  HSGYAGQLQ A V+GV+ P+G+W RDL  +EG V+ F  ++VQHDHYR+KVEDL  KA+ LEARA TRGDSR+AK AAE+L RN+ KL EVT  +++   + C  M  AW +R   MN IV+R++HFQE++  EQLM  LGV+RIL   E GG +WG    I+ FV +  VR YEGEL+RK  VM ER W+RLVGSSLEV+D+K K+       YVVTE PV  H V+GV KV   +FRV +     TG  GL+LYA D  D +GW  AL +AS WDQL S+ +A                                          XXXXXXXXXXXXXXXXX XX    EK P+L +        XXXX      P G+ G G P GG  GG    G         G  P+G G P      H +                   XXXXXXXXX    MGDPRL +                               P   GPP+ +  + L  GM Q+GPP+++                            GP                W     Q                      F  +FG   G A +QQGFRRS S G    D +    V +  +P                                XXXXXXXXXXA       EETK+   D  GD+       A     XXXXXXX                                      P      T+ T +D                         XXXXXXX        R     ++   T G T   +  KP S WK +      GS+    A  A   G     GK   E VS                 ++       + RT  G  AG                    +   +P     PA   PS S +           A F + + P+  GG         S A+ ++       XXXXXXXXXXXXXXXXX        +DA AA Q KVF+RLC +     SE E+GDAG G AA        E  L+F QLM WDEVQELL++G+LKE E++ +++EA R Q  E   G    A+T D+W   G+          A  GS +G S       +D LT KGFM LVKLIEELQFEKELEQDKGVGL+PGPV V+
Sbjct:   69 VGEDASHIYLVRERGFKPAVAFKEAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKARALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWEDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGGGPRWGGTMGIEPFVPKGHVRHYEGELLRKHMVMKERMWYRLVGSSLEVYDMKPKEGRDNTPMYVVTELPVTVHEVKGVTKVSGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSSKAAGIAPGGEAGVAMA--------------------------GAXXXXXXXXXXXXXXXXXKXXXXXXEKNPELANXXXXXXXXXXXXL----LPPGLAGPGGPVGGMGGGVGIGGSFNSRTGRAGLGPSGVGMPFGNMGSHMNPPSFSGSSXXXXXXXXXXXXXXXXXXXXXXXQMGDPRLHMAAQQMGMSSNGRXXXXXXXXXXXXMPPHFDPPQMSGPPV-NPSTGLPVGMRQNGPPIVLPAGMVPRGGGXXXXXXXXXXXXXXXXXXGP----------------WGSTPQQXXXXXXXXXXXXXXXXLGTSRSFTSRFGMKQGAAGRQQGFRRSSSFG----DWLGPSGVGQPLSPTMEVDSFETQSTRSAPPFGATATVGDATAAAEXXXXXXXXXXAGGHVTGTEETKSSTKDKKGDEGADKATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXAPGVVTIQTIHTKKDAPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLSDLFKRGDDGGLSRYDTSGETPARARSKPASTWKRMMSFGGAGSSYRYDAGDAGVSG----EGKSSAEEVSESDSALAAKAKNDGTQDSAALTTAEVSRRTDSGATAGSSGGSVVADTPSSAASTRATVGDPTPVI---PAVEPPSESPAGGCEYITPAYFAAFSAATTPAPAGG-------PGSGANPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASNDAVAA-QAKVFQRLCDSS---GSETETGDAGGGAAA---GAFGEESTLSFRQLMGWDEVQELLEFGALKEGELTTLWQEAARAQDAELGTGGDPRAQTTDIW---GSGSPGAANAAAAAPGSQEGGSG---GSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLVPGPVCVV 1222          
BLAST of mRNA_H-elongata_contig5254.12559.1 vs. uniprot
Match: A0A6H5KHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT2_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 8.450e-85
Identity = 165/313 (52.72%), Postives = 213/313 (68.05%), Query Frame = 0
Query:    1 MGADTSHLYGVKDAGFKPVTAFKDAQEQCHSGYAGQLQHAFVQGVLNPVGDWQRDLRGLEGKVSAFTSVQVQHDHYRIKVEDLKIKAQQLEARAATRGDSRNAKAAAERLNRNSAKLQEVTKHYNEARENSCQGMNEAWRNRLVRMNNIVSRLIHFQEAYLGEQLMIMLGVSRILE--EAGGKQWGENTEIQAFVSRSDVRLYEGELIRKLRVMNERKWFRLVGSSLEVFDIKDKDDS----YYVVTETPVVTHIVRGVQKVDETSFRVNLA----TGDVGLHLYAMDAADAEGWCKALEKASVWDQLTSTQE 303
            +G D SH+Y +++ GFKP  AFK AQ+  HSGYAGQLQ A V+GV+ P+G+W RDL  +EG V+ F  ++VQHDHYR+KVEDL  KA+ LEARA TRGDSR+AK AAE+L RN+ KL EVT  +++   + C  M  AW +R   MN IV+R++HFQE++  EQLM  LGV+RIL   E  G +WG    I+ FV +  VR YEGEL+RK  VM ER W+RLVGSSLE +D+K K+       YVVTE PV  + V+GV K+   +FRV +     TG  GL+LYA D  D +GW  AL +AS WDQL S+ +
Sbjct:   69 VGEDASHIYLIRERGFKPAVAFKQAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKARALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWDDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGSGPRWGGTMGIEPFVPKGHVRHYEGELLRKHMVMKERMWYRLVGSSLEAYDMKPKEGRDNTPMYVVTELPVAVYEVKGVTKISGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSNK 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5254.12559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWV3_ECTSI1.070e-9535.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHT2_9PHAE8.450e-8552.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..93
NoneNo IPR availableCOILSCoilCoilcoord: 100..130
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 193..296
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 1..166
e-value: 2.7E-22
score: 81.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5254contigH-elongata_contig5254:2656..11195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5254.12559.1mRNA_H-elongata_contig5254.12559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5254 513..11228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5254.12559.1 ID=prot_H-elongata_contig5254.12559.1|Name=mRNA_H-elongata_contig5254.12559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1130bp
MGADTSHLYGVKDAGFKPVTAFKDAQEQCHSGYAGQLQHAFVQGVLNPVG
DWQRDLRGLEGKVSAFTSVQVQHDHYRIKVEDLKIKAQQLEARAATRGDS
RNAKAAAERLNRNSAKLQEVTKHYNEARENSCQGMNEAWRNRLVRMNNIV
SRLIHFQEAYLGEQLMIMLGVSRILEEAGGKQWGENTEIQAFVSRSDVRL
YEGELIRKLRVMNERKWFRLVGSSLEVFDIKDKDDSYYVVTETPVVTHIV
RGVQKVDETSFRVNLATGDVGLHLYAMDAADAEGWCKALEKASVWDQLTS
TQEAAAAGGGPKAAGIAPGGENGPPAGTPPAAAPNGGGGGKKGKNKKKGK
GEGDGGGGGGKGGKGGGDANEKVPDLLDTTSKIGLGVGLGLGMGAFPAGM
TGGGVPGGGGGPRASGRMGKTMSMMGSSPAGFGGPMRGYSGHSSMGGPSS
AYAGPSPSMGDPRLGIPLGGGPPMPSMHSSLLPGMTQSGPPVMMPPGMVP
PGSAPVIDPIAPGPQPPHGMMGGPGGPPMMGGPGAGRGGGWNMGNHQFVP
KFGSMGGAEKQQGFRRSHSVGAGIPDQMHQGFVSKKSAPPASKKSASSFG
ASAAVGAATAMAEEASAAAAEAAEGGGRKKSARNADEETKAEEADGDDVV
PTYVTAPAQAPQPKPQPQVYVRAAATPRKLHPVATTLPTKLPTPKFSTRS
FSASSTPRPSPTPTVKTSEDKRIAAISKAATAAAAAAAVTAVAAATRKTQ
APVTETQTPGRTRISSFPKPGSAWKALKKMAATGSTPSPVASGAESKGTT
PRAGKDERVSRPPDTTTAAPESTTEDAASPTNAVNDTERTVGGEAAGDEK
AGMVAPPPSVTAAAALNLVGSSPASSDSPARSVPSASASNERRLAVFKSL
SGPSSTGGAKSSSKKSDSIADVSSARASANSLASSKLCSSSSSGGGGGSR
GYETPGSDAKAADQVKVFRRLCVAKTPGASEAESGDAGAGVAAQRAAGRS
AEQKLTFDQLMAWDEVQELLDYGSLKEAEVSGIFKEAVRTQGWENVGSSA
KTADLWALPGTNKDSRRAMIRAGSGSTDGRSDDEDARPKDALTQKGFMNL
VKLIEELQFEKELEQDKGVGLIPGPVYVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf