prot_H-elongata_contig5252.12557.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5252.12557.1
Unique Nameprot_H-elongata_contig5252.12557.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 3.970e-38
Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKG-----------HEIGSSWLNRSNWLELKGSS-WKARA-RRGVGVGAGNWKKKGGLGEASPLLGGVQFEV 143
            MNFVWALSYN+VALPLA G+LKPWLG+ +TPALAA+FMASSS+LVV+SSLGLKLYTRPGE    +S+   CR RLGL R PP P+ G            +   SWL +  WLEL     W+ R  RR VG G G   K+   GEASPLLG  QF+V
Sbjct: 1249 MNFVWALSYNVVALPLAAGLLKPWLGLGVTPALAALFMASSSSLVVLSSLGLKLYTRPGEVAPRESVVRSCRRRLGL-RTPPPPRHGGTSWNNPRVYDRQRRRSWLGKEFWLELGSRRPWRTREKRRDVGGGWGG-SKRFQAGEASPLLGPGQFQV 1402          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A836CM51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM51_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.840e-13
Identity = 43/71 (60.56%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARC 71
            +NF WAL YN  ALPLA G L P LG+SLTP LAA FMASSS LVV+SSL L LY  PG      + +A C
Sbjct: 1192 LNFAWALGYNAAALPLAAGALLPPLGLSLTPPLAAAFMASSSMLVVLSSLALNLYRPPGHDPSCAADAAWC 1262          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A0A9CDC4_ARUDO (Heavy metal ATPase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CDC4_ARUDO)

HSP 1 Score: 63.9 bits (154), Expect = 3.560e-10
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKGHEI 90
            +N+VWAL YN++ +P+A GVL P+ G+ L P LA   MA+SS  VV SSL L+LY +P                L +   PPAPK G ++
Sbjct:   67 LNYVWALGYNILGMPVAAGVLFPFTGIRLPPWLAGACMAASSVSVVCSSLLLQLYKKP----------------LHVEDAPPAPKDGSDL 140          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A5C3DNW4_9BASI (Probable CCC2 - P-type ATPase, Cu(2+)-transporting ATPase n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3DNW4_9BASI)

HSP 1 Score: 65.1 bits (157), Expect = 1.770e-9
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQS 66
            +NF+WA  YNL+ +PLA+G+  PW G+SL P +A   MA SS  VV SSL LK Y RP E T T S
Sbjct:  933 LNFIWATIYNLIGIPLAMGIFLPW-GLSLHPMMAGAAMAFSSVSVVASSLTLKWYKRPAELTSTSS 997          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S2RRQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRQ9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.410e-9
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 NFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 58
            NF WA++YNLV +P+A G+L PWL + L PA A + MA SS  VV SSL LKLYT P
Sbjct:  802 NFFWAIAYNLVLIPVAAGLLVPWLNLRLHPAAAGLAMALSSVSVVASSLTLKLYTPP 858          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S0JW25_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JW25_CAFRO)

HSP 1 Score: 63.5 bits (153), Expect = 5.300e-9
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    2 NFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSARCRTRLG 76
            N+ ++L YN + +P+A G L P L V+L P +AA+ MA SS  VV+SSL L+LY+ PG+PT  Q +  R R R G
Sbjct:  226 NYAFSLGYNALGVPVAAGALYPALRVALPPEVAALTMALSSVCVVLSSLALRLYSPPGQPTCWQGLVHRRRARGG 300          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: UPI001FB13F3C (copper-transporting ATPase HMA4-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB13F3C)

HSP 1 Score: 62.8 bits (151), Expect = 1.120e-8
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 58
            MN+VWAL YN++ LP+A GVL P+LG+ L P LA   MA+SS  VV SSL L+LY +P
Sbjct:  900 MNYVWALGYNVLGLPIAAGVLFPFLGIRLPPWLAGACMAASSISVVCSSLMLQLYKKP 957          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: E6ZJX6_SPORE (Probable CCC2-P-type ATPase, Cu(2+)-transporting ATPase n=4 Tax=Sporisorium TaxID=63265 RepID=E6ZJX6_SPORE)

HSP 1 Score: 62.8 bits (151), Expect = 1.130e-8
Identity = 35/69 (50.72%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPTVTQSMSA 69
            +NF+WA  YNL+ +PLA+G+  PW G+SL P +A   MA SS  VV SSL LK Y RP E T      A
Sbjct:  931 LNFIWATVYNLIGIPLAMGIFLPW-GLSLHPMMAGAAMAFSSVSVVASSLTLKWYKRPAELTSASQADA 998          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A077R2F8_9BASI (Probable CCC2-P-type ATPase, Cu(2 )-transporting ATPase n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R2F8_9BASI)

HSP 1 Score: 62.4 bits (150), Expect = 1.540e-8
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRPGEPT 62
            +NFVWA  YNLV +PLA+G+  PW G+SL P +A   MA SS  VV SSL LK Y RP E T
Sbjct:  932 LNFVWATIYNLVGIPLAMGIFLPW-GLSLHPMMAGAAMAFSSVSVVASSLTLKWYKRPTELT 992          
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Match: A0A7S1D9K8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9K8_CYCTE)

HSP 1 Score: 58.9 bits (141), Expect = 1.800e-8
Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    2 NFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSLGLKLYTRP 58
            NFVWA+ YN++ALP A GV  PW+   L P  A + MA SS  VV SSL L+ Y RP
Sbjct:    5 NFVWAMGYNMLALPFAAGVFYPWINWRLPPEFAGLMMAFSSVSVVTSSLLLRAYHRP 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5252.12557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTL7_ECTSI3.970e-3857.69Heavy metal translocating P-type ATPase n=2 Tax=Ec... [more]
A0A836CM51_9STRA5.840e-1360.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0A9CDC4_ARUDO3.560e-1042.22Heavy metal ATPase n=1 Tax=Arundo donax TaxID=3570... [more]
A0A5C3DNW4_9BASI1.770e-954.55Probable CCC2 - P-type ATPase, Cu(2+)-transporting... [more]
A0A7S2RRQ9_9STRA4.410e-959.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0JW25_CAFRO5.300e-948.00Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
UPI001FB13F3C1.120e-858.62copper-transporting ATPase HMA4-like n=1 Tax=Impat... [more]
E6ZJX6_SPORE1.130e-850.72Probable CCC2-P-type ATPase, Cu(2+)-transporting A... [more]
A0A077R2F8_9BASI1.540e-858.06Probable CCC2-P-type ATPase, Cu(2 )-transporting A... [more]
A0A7S1D9K8_CYCTE1.800e-854.39Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46594FAMILY NOT NAMEDcoord: 1..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5252contigH-elongata_contig5252:2761..4321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5252.12557.1mRNA_H-elongata_contig5252.12557.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5252 2725..6561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5252.12557.1 ID=prot_H-elongata_contig5252.12557.1|Name=mRNA_H-elongata_contig5252.12557.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MNFVWALSYNLVALPLAVGVLKPWLGVSLTPALAAVFMASSSTLVVVSSL
GLKLYTRPGEPTVTQSMSARCRTRLGLNRQPPAPKKGHEIGSSWLNRSNW
LELKGSSWKARARRGVGVGAGNWKKKGGLGEASPLLGGVQFEV*
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