prot_H-elongata_contig52383.12544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52383.12544.1
Unique Nameprot_H-elongata_contig52383.12544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: D8LI97_ECTSI (Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI97_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 4.870e-66
Identity = 103/140 (73.57%), Postives = 121/140 (86.43%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAARKNGGKSKPKGAGRERKPLKQ 141
            AF +AVDWSE WIQG+L FHL LW+FFIV R+SFG+QV LFAV+L GTR SE++NT  R+RWQ FSRQNYFDEHG+FMGVMWAGPLLILGFTMLV+LLCQ ASLLV VKT+QFKR+IAA+K+GGKSK K   +++K  KQ
Sbjct:   63 AFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDRWQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQ 202          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A7S2Y0G5_9STRA (Transmembrane protein 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.440e-31
Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDI 118
            AF AAV+W ERWIQG+LAFH+ +++  +V RK+F  QV +F +I+     SE +NT  +N WQ FS Q+YFD +GLFM VM+AGPLL++GF  L N L  +A LLVKVK  + K+ +
Sbjct:   80 AFKAAVNWEERWIQGILAFHVIVFVLMLVFRKNFNVQVCIFLLIVGLVSCSETINTLGQNHWQEFSTQDYFDPNGLFMMVMFAGPLLLIGFLQLFNFLLISADLLVKVKRAELKKHM 196          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A835ZFQ2_9STRA (Transmembrane protein 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ2_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.390e-30
Identity = 57/122 (46.72%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAARKN 123
            AFCAAVDWSE WIQ +L FH+ +    ++ R     Q+ LF  I    R +E+ N +   RW+ F+RQNYFDE G+F+GV+W  PLL++   ML+  + ++A LLV VK  Q +R+IAARK+
Sbjct:   39 AFCAAVDWSETWIQAILCFHVAVAAAALLSRNRLNCQIALFLSICALVRGAEWANAYAARRWRDFARQNYFDERGVFVGVVWCAPLLLVLLGMLLGFVVRSARLLVTVKRAQLRREIAARKS 160          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: F0Y7C0_AURAN (Transmembrane protein 18 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C0_AURAN)

HSP 1 Score: 111 bits (278), Expect = 1.600e-28
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 SAFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAAR 121
            +AF AAVDWSERWIQG+LA+H +LW+ F+  RK +  QV LF  + +    +E +N      W+ F+ QNYFD+HG+F G ++  P+L L   ML+N L  AA +LV VK  +FK  + A+
Sbjct:   31 AAFRAAVDWSERWIQGVLAWHASLWVVFLAFRKVYEVQVGLFFGVTIAVGLAERLNALGAAHWEKFATQNYFDDHGIFAGALFCAPMLALSLCMLLNFLHLAAHMLVDVKRREFKDHLTAK 151          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A7S2CTX0_9STRA (Transmembrane protein 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTX0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.190e-27
Identity = 55/121 (45.45%), Postives = 81/121 (66.94%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAARK 122
            AF AAVDW+E+WIQGLL  H  LW+  +  R+ F  QV +F ++     SSE++N+    RWQ+FS Q+YFD  G F+ VM+AGPLL L    ++N L  +A++LV+VK  + K ++A++K
Sbjct:   57 AFIAAVDWNEKWIQGLLLGHFLLWVITLGFRRRFYLQVFIFFMVCAMVWSSEHINSAAHVRWQSFSTQDYFDPSGFFISVMFAGPLLALALFQMINFLIISANMLVEVKRNELKTNLASKK 177          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A7S2CJE4_9STRA (Transmembrane protein 18 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJE4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.100e-26
Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAA 120
            AFCAAVDWSERW++ L+A H  LW+  +  RK F  Q+ +F ++     +SE +NT     W++FS Q+YFD  G F  VM++GPLL+L    ++N L  +A LLV VK  +FK+   A
Sbjct:   61 AFCAAVDWSERWVKALVAGHAVLWIVTLCTRKRFNFQIGVFFLVCALVWASETLNTLAHKNWRSFSTQDYFDSAGFFTAVMYSGPLLLLAMLQMMNFLALSAELLVVVKKNEFKQQREA 179          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A7S4A3H0_9STRA (Transmembrane protein 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3H0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.630e-26
Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 0
Query:    1 SAFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFK 115
            +AF AAVDW E WI+ LL +HL+LW+ F+  RK+F  Q  LF  I      +E +N     RW+ F+ QNYFDE G+F G+M   PLL L F ML+N L  A+S+LV VK  +F+
Sbjct:   59 AAFIAAVDWRENWIRCLLLWHLSLWVLFVFTRKNFPVQCGLFFGIAACVALAETLNGLCAKRWEKFATQNYFDERGVFAGIMLCAPLLALAFAMLLNFLVMASSMLVTVKRAEFR 173          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A7S2SGF8_9STRA (Transmembrane protein 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGF8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.940e-26
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    2 AFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKR 116
            AF AAVDWSERWIQ LL FH+ LW+  +  R+    Q   F  +     S+E MNT+    WQ FS+Q+YF  +G F+GVM+A PLL L    ++N LC AA+LLV+VK ++ +R
Sbjct:   58 AFTAAVDWSERWIQALLGFHVALWMITLWTRRYIWWQCGTFFAVCGLVWSAEPMNTWAAAHWQDFSKQDYFQPNGFFVGVMYAAPLLALAMFQMINFLCIAANLLVEVKRKELRR 172          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: A0A8J5Y564_DIALT (Transmembrane protein 18 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y564_DIALT)

HSP 1 Score: 103 bits (256), Expect = 3.300e-25
Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    3 FCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFKRDIAARKNG 124
            F  A+D++ERWI  LLAFH  LW F I+ R+   +Q  LF  +++GTR++E++N      W+ F+ QNYFD+HG+FM VMW+ PLL   F +++  L  + +LLV+VK  + +    AR  G
Sbjct:   38 FVHAIDFTERWIALLLAFHAILWAFIILTRERTQAQAFLFLALVLGTRAAEWLNGLGAAHWEAFAGQNYFDKHGVFMSVMWSAPLLGDAFLIILFALRSSVALLVQVKRAELRHTRKARARG 159          
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Match: UPI0009013488 (transmembrane protein 18 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009013488)

HSP 1 Score: 102 bits (255), Expect = 4.790e-25
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    3 FCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTRSSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLCQAASLLVKVKTEQFK 115
            F  A+DW+E W+ GL++FH+ L L  + LRK+  SQ+ LF + L G   +E +N      W++F+RQNYFD HGLF+ V+W+GPLL++   +LVN L     L+V+ K  + +
Sbjct:   40 FFHAIDWTEPWLVGLISFHVVLLLLAVFLRKNINSQMFLFLLALGGVYFAENLNKILAANWKSFARQNYFDAHGLFLSVLWSGPLLVISIIILVNTLFSMCYLIVRWKKAELR 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52383.12544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI97_ECTSI4.870e-6673.57Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2Y0G5_9STRA7.440e-3152.14Transmembrane protein 18 n=1 Tax=Fibrocapsa japoni... [more]
A0A835ZFQ2_9STRA3.390e-3046.72Transmembrane protein 18 n=1 Tax=Tribonema minus T... [more]
F0Y7C0_AURAN1.600e-2845.45Transmembrane protein 18 n=1 Tax=Aureococcus anoph... [more]
A0A7S2CTX0_9STRA2.190e-2745.45Transmembrane protein 18 n=1 Tax=Dictyocha speculu... [more]
A0A7S2CJE4_9STRA1.100e-2644.54Transmembrane protein 18 (Fragment) n=1 Tax=Floren... [more]
A0A7S4A3H0_9STRA2.630e-2647.83Transmembrane protein 18 n=1 Tax=Pelagomonas calce... [more]
A0A7S2SGF8_9STRA4.940e-2647.83Transmembrane protein 18 n=1 Tax=Rhizochromulina m... [more]
A0A8J5Y564_DIALT3.300e-2542.62Transmembrane protein 18 n=1 Tax=Diacronema luther... [more]
UPI00090134884.790e-2542.48transmembrane protein 18 n=1 Tax=Ipomoea nil TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 2..117
e-value: 3.0E-38
score: 130.4
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 2..122
NoneNo IPR availablePANTHERPTHR22593FAMILY NOT NAMEDcoord: 2..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52383contigH-elongata_contig52383:1658..3123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52383.12544.1mRNA_H-elongata_contig52383.12544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52383 1329..3123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52383.12544.1 ID=prot_H-elongata_contig52383.12544.1|Name=mRNA_H-elongata_contig52383.12544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
SAFCAAVDWSERWIQGLLAFHLTLWLFFIVLRKSFGSQVVLFAVILVGTR
SSEYMNTFFRNRWQTFSRQNYFDEHGLFMGVMWAGPLLILGFTMLVNLLC
QAASLLVKVKTEQFKRDIAARKNGGKSKPKGAGRERKPLKQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026721TMEM18