prot_H-elongata_contig52259.12528.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52259.12528.1
Unique Nameprot_H-elongata_contig52259.12528.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 5.510e-47
Identity = 90/110 (81.82%), Postives = 99/110 (90.00%), Query Frame = 0
Query:    1 LLLDE-GGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LLLDE GGSGE +AVVLTDILG+EDALGTMDFKVAGN+ GITTFQLDIKCAGLTTALLGRALTQAKAGRL +L EM+KA PDGPR  ISPFVP AT+M+V+ DQIGK+ G
Sbjct:  495 LLLDEEGGSGE-EAVVLTDILGLEDALGTMDFKVAGNDKGITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMQKAQPDGPRKEISPFVPTATIMSVDPDQIGKIIG 603          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.140e-31
Identity = 71/113 (62.83%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 LLLDE----GGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LLLDE    G SGEG  VVLTDILG+EDALGTMDFKVAG++  ITTFQ+DIKC GLT ALL +AL QAK GRL +L EM KAL + PR ++S + P+ +V  V LD IG++ G
Sbjct:  421 LLLDEDAEGGASGEG-GVVLTDILGLEDALGTMDFKVAGDKDAITTFQMDIKCEGLTIALLTKALAQAKEGRLHILGEMAKALAE-PRPTLSKWAPIFSVFKVPLDSIGRIIG 531          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S4NK05_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NK05_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 2.200e-29
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LLLDEGG G G+ +VLTDILG EDALGTMDFKVAG+  G+T FQLDIKC GL   L+ RAL QAK GRL +L  M++A P+ P +S+ P +P     +++  ++G + G
Sbjct:    8 LLLDEGGGG-GEPIVLTDILGSEDALGTMDFKVAGDGEGVTAFQLDIKCEGLDIDLMRRALEQAKEGRLHILRLMEEACPE-PASSLPPTLPRQVKTSIDPSKVGMIIG 114          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S4V6X3_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6X3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.390e-29
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LL D+GG  + +AV+++DILG EDALGTMDFKVAG+  GIT FQLDIKC GLT   + +AL QA+ GRL +L EM+K L D PR+ + P VP   + ++  D IGKV G
Sbjct:  139 LLGDKGGVSDENAVIVSDILGTEDALGTMDFKVAGDRDGITAFQLDIKCEGLTLETMAKALEQARQGRLHILDEMEKVL-DNPRSDLPPTVPKMRIFSINEDSIGKVIG 246          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S0CK71_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK71_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.610e-28
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LL D+    + DA++++DILG EDALGTMDFKVAG+  GITTFQLDIKC GL+ A + RAL QAK GRL +L EM K L + PR+ +   VP     ++  D IGKV G
Sbjct:   97 LLNDKQSVSDADAIIVSDILGTEDALGTMDFKVAGDREGITTFQLDIKCEGLSLATMERALDQAKEGRLHILDEMDKCLSE-PRSKLPDTVPKLQSFDISQDSIGKVIG 204          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: K0QYE1_THAOC (S1 motif domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYE1_THAOC)

HSP 1 Score: 114 bits (286), Expect = 2.720e-28
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LL D+    + +AV+++DILG EDALGTMDFKVAG++ GITTFQLDIKC GLT   + RAL QAK GR+ +L EM+KAL + PR  + P VP   ++ +  D IGKV G
Sbjct:   68 LLGDKSDVSDENAVIVSDILGTEDALGTMDFKVAGDKEGITTFQLDIKCEGLTLETMARALHQAKEGRIHILGEMEKALAE-PRGELPPTVPKVIMVKISEDSIGKVIG 175          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S3EVC0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVC0_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 6.820e-28
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LLLDE G G G+ +VLTDILG EDALGTMDFKVAG+  G+T FQLDIKC GL   L+ RAL QAK GRL +L  M++A P+ P +S+ P +P     +++  ++G + G
Sbjct:   41 LLLDEAGGG-GEPIVLTDILGSEDALGTMDFKVAGDGEGVTAFQLDIKCEGLDIDLMRRALEQAKEGRLHILRLMEEACPE-PASSLPPTLPRQVKTSIDPSKVGMIIG 147          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: B8C1C5_THAPS (Polyribonucleotide nucleotidyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C5_THAPS)

HSP 1 Score: 115 bits (288), Expect = 1.080e-27
Identity = 63/109 (57.80%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            LL D+GG  + +AV+++DILG EDALGTMDFKVAGN+ GITTFQLDIKC GLT   + +AL QAK GRL +L EM+KAL + PR  +   VP    + +  D IGKV G
Sbjct:  436 LLGDKGGVSDENAVIVSDILGTEDALGTMDFKVAGNKEGITTFQLDIKCEGLTLETMKKALDQAKEGRLHILGEMEKALKE-PRAELPASVPKMIKVTISPDSIGKVIG 543          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S4MVV5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVV5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.830e-27
Identity = 58/105 (55.24%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    1 LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIG 105
            LL D+GG    DA++L+DILG EDALGTMDFKVAG+  GITTFQLDIKC GLT   + RAL QA+ GRL +L EM   LP+ PR  +   VP      +  + IG
Sbjct:   80 LLDDKGGVSSDDAIILSDILGTEDALGTMDFKVAGDREGITTFQLDIKCEGLTVDTMERALEQARLGRLHILDEMDSVLPE-PRADLPDTVPKIAQFGIPEENIG 183          
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Match: A0A7S0MD58_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MD58_9CRYP)

HSP 1 Score: 107 bits (267), Expect = 6.730e-27
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   12 DAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCAGLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVELDQIGKVSG 109
            +AVVLTDILGIED LGTMDFKVAG+  GI+ FQLDIKC GL+ ALL RAL QAK GR+ +L++M +A P  P   ++P VP    + V    IGK+ G
Sbjct:    3 EAVVLTDILGIEDGLGTMDFKVAGDAQGISAFQLDIKCEGLSPALLKRALAQAKEGRVSILYQMLRAKPK-PSPELAPSVPKLLTLTVPQSAIGKIIG 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52259.12528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGU0_ECTSI5.510e-4781.82Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A835ZC49_9STRA6.140e-3162.83Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7S4NK05_9EUKA2.200e-2955.05Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S4V6X3_9STRA5.390e-2955.96Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7S0CK71_9STRA1.610e-2855.05Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
K0QYE1_THAOC2.720e-2855.96S1 motif domain-containing protein n=1 Tax=Thalass... [more]
A0A7S3EVC0_9EUKA6.820e-2854.13Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
B8C1C5_THAPS1.080e-2757.80Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7S4MVV5_9STRA1.830e-2755.24Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S0MD58_9CRYP6.730e-2758.16Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 2..93
e-value: 2.5E-19
score: 71.2
NoneNo IPR availablePANTHERPTHR11252:SF0POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALcoord: 8..107
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 8..107
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 12..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52259contigH-elongata_contig52259:1028..3607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52259.12528.1mRNA_H-elongata_contig52259.12528.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52259 1028..3607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52259.12528.1 ID=prot_H-elongata_contig52259.12528.1|Name=mRNA_H-elongata_contig52259.12528.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
LLLDEGGSGEGDAVVLTDILGIEDALGTMDFKVAGNEHGITTFQLDIKCA
GLTTALLGRALTQAKAGRLRVLHEMKKALPDGPRNSISPFVPVATVMNVE
LDQIGKVSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR012162PNPase
IPR036345ExoRNase_PH_dom2_sf