prot_H-elongata_contig5224.12527.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5224.12527.1
Unique Nameprot_H-elongata_contig5224.12527.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length248
Homology
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 2.730e-55
Identity = 116/248 (46.77%), Postives = 148/248 (59.68%), Query Frame = 0
Query:    2 SLDSQVSSSDLNNSYSDDGLTIVVNGEDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQIL--NPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            SLD  V  S   +S S+ G T+V+NG          T F NNTC   GG +AL+  L VN   +N++F  N+A V+GGAV++ G G G  F    F+ N AQ+GGAV   GSG      +E   I   NPTTF+ C FIDN A   GGAI SA+GQD F+++ F+GN+A  GG LRLAG+ S+  CSF DNISD  GG AV NIG + S    TF GNVF+CDP  +L++N S + +   C GC   C
Sbjct:  534 SLDGGVIGSFSTDSVSNQGSTLVMNGT---------TAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNL----KENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETAC 768          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 6.230e-54
Identity = 110/225 (48.89%), Postives = 142/225 (63.11%), Query Frame = 0
Query:   25 VNGEDSVVTISGPTRFFNNTCNGKGGGMALVQS--LVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            +N E+S + I+G T FFNN C G GG + L+ +  LVVN    ++ F+EN+A V+GGAV++ G G+G  F N +F  N AQ+GGAV   GSG +  + +   +  NPTTFE C F+ N A   GGAI SA+G DYF+DT FE N A  GGALRLAG+ SI +CSF +N SD +GG AV NIG + S    +F  N F+C   TFL +N S D F  VC GC   C
Sbjct:  901 LNLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVN-PAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADI--EPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTAC 1122          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 9.310e-54
Identity = 109/224 (48.66%), Postives = 138/224 (61.61%), Query Frame = 0
Query:   24 VVNGEDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            V++ EDS ++I GPT F NNT    GG +AL+  L ++ N    +F +NSA ++GGAVY+     G  F +V F  N AQ+GGAV + GSG       E  Q+L PTTF  C+F  N A   GGA+ SASGQD F DT+F GNQA  GGALRLAG  S+ NCSF +N+SD   G AV N+G +   +  TF GNVFNC P+TFLN+  S D     C+GC   C
Sbjct:  311 VLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVK--GGENDQLL-PTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYT-SGDALDEACSGCQTTC 530          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.530e-53
Identity = 110/220 (50.00%), Postives = 141/220 (64.09%), Query Frame = 0
Query:   26 NGEDSVVTISGPTRFFNNTCNGKGGGMALVQ--SLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGC 243
            N  +S +  +G T FFNN C G GGGMAL    +LV++     I+F EN+A VSGGAV++   G+G  F   SFV N AQIGGAV   GSG +  +++   +  NPTTF+ C+F+ N A   GGAI +A+G D+F+DT FE N A  GGALRLAG+ SI NCSF +N S+  GG AV NIG + S  +  F GN F+C    FL +N+SDD F TVC GC
Sbjct:  711 NPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVID-TEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDI--EPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGC 927          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 4.270e-51
Identity = 104/206 (50.49%), Postives = 131/206 (63.59%), Query Frame = 0
Query:   24 VVNGEDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNF 229
            V++ EDS ++I GPT F NNT    GG +AL+  L ++ N +   F +NSA ++GGAVY+     G  F +V F  N AQ+GGAV A GSG       E  Q+L PTTF  C+F  N A   GGA+ SASGQD F DT+F GNQA  GGALRLAG  S+ NCSF +NISD   G AV N+G +   +  +F GNVFNC P+TFLN+
Sbjct: 2224 VLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTEETNFVDNSADLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSALGSGNVK--GGENDQLL-PTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENISDEGEGAAVSNVGVISEISNTSFSGNVFNCAPDTFLNY 2426          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 6.960e-47
Identity = 99/236 (41.95%), Postives = 129/236 (54.66%), Query Frame = 0
Query:   24 VVNGEDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSD------------DHFGTVCTGCFGEC 247
            V++ EDS ++I GPT F NNT    GG +AL+  L ++ N +  +F +NSA ++GG VY+     G  F +V F  N A +GGA                   L PTTF  C+F  N     GGA+ SASGQD F DT+F GNQA  GGALRLAG  S++NCSF +N+SD   G AV N+G +   +  +F GNVFNC P+TFLN+   D            D     C+GC   C
Sbjct:  321 VLSPEDSTLSIDGPTAFVNNTSGENGGALALLGELSISVNTEESSFVDNSADLAGGTVYVSDTAIGPTFSDVIFDSNFAHVGGA-------------------LLPTTFSRCRFTYNRETATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLENCSFVENLSDEGEGAAVSNVGIISEISNTSFSGNVFNCAPDTFLNYTVRDTMLTCSLSTMSGDPLDEACSGCQATC 537          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.650e-46
Identity = 94/220 (42.73%), Postives = 132/220 (60.00%), Query Frame = 0
Query:   29 DSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDH-FGTVCTGCFGEC 247
            +S + I+G T FFNNTC   GG +AL  +  ++ N  +++F+ NSAG +GGAV++ G G G  F +VSF+ N AQ+GGA    GSG     D      + PT F+ C+FIDN A T GGA+ SA+GQD  ++++F+GN A+VGGALRLAG            +S    G AV NIG + +   ++F GN F C P+ FL ++ +D+  F  VC GC   C
Sbjct:  723 ESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGN----DRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVAC 938          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 8.910e-46
Identity = 98/227 (43.17%), Postives = 127/227 (55.95%), Query Frame = 0
Query:   21 LTIVVNGEDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            L  V N   S + I+GPT F NNTC G GGG+A    L V+ +   +TFS N+A V+GGAV++ G G G  F              AV   GSG      +   +  +PTTF+ C F+ N A   GGA  SA+GQD F+  +F GN+A  GGALR+AG+ S++NCSF DN+SD   G A+ NIG++       F  NVF+C   TFL+ N S D F  VC GC   C
Sbjct:  514 LDSVYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFD--LEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVC 738          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.100e-42
Identity = 96/232 (41.38%), Postives = 129/232 (55.60%), Query Frame = 0
Query:   19 DGLTIVVNG---EDSVVTISGPTRFFNNTCNGKGGGMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            DG  +  N     +S++ I+G T F +N+  G GGGMAL   + +N    +++F  NSAGV+G A+++  +  G +F               +   GSGT    DE G     PTTF+ C+FI N A + GGAI SA+G+D   +++FEGN A  GGALRLAG   I NCSF +N SD   G AV NIG++ S T  +F GN F+C   TF N   S DHF  +C GC   C
Sbjct:  797 DGGAVATNALSTSNSILFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGT----DESGDL---PTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTC 1021          
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.530e-42
Identity = 85/196 (43.37%), Postives = 119/196 (60.71%), Query Frame = 0
Query:   52 MALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGNVAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIFSASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAVFNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGEC 247
            +AL+  L V    +N  F  N+A V+GGA+++ G   G  F N+S V N AQ+GGA+   GSGT+   ++       PTTFE C+F  N A   GGA+ +A+GQD F++++FEGN A  GGALRLAG+  + NCSF +N+SD  GG AV NIG++ S +  +F  NV+ C    FL   +S   +  +C GC  EC
Sbjct:  296 LALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPA---PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVEC 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5224.12527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G301_ECTSI2.730e-5546.77Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI6.230e-5448.89Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7FHH1_ECTSI9.310e-5448.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIY0_ECTSI1.530e-5350.00Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHG7_ECTSI4.270e-5150.49LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KR67_9PHAE6.960e-4741.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2X5_ECTSI2.650e-4642.73Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FTL7_ECTSI8.910e-4643.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K0E9_9PHAE1.100e-4241.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2Z8_ECTSI3.530e-4243.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 66..84
e-value: 0.002
score: 18.5
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 63..82
e-value: 1.6E-5
score: 22.5
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 24..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5224contigH-elongata_contig5224:3826..5167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5224.12527.1mRNA_H-elongata_contig5224.12527.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5224 3826..5516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5224.12527.1 ID=prot_H-elongata_contig5224.12527.1|Name=mRNA_H-elongata_contig5224.12527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
MSLDSQVSSSDLNNSYSDDGLTIVVNGEDSVVTISGPTRFFNNTCNGKGG
GMALVQSLVVNFNRKNITFSENSAGVSGGAVYIEGIGSGTKFENVSFVGN
VAQIGGAVHATGSGTTVTIDEEGKQILNPTTFEGCKFIDNFAFTMGGAIF
SASGQDYFLDTLFEGNQAKVGGALRLAGSVSIKNCSFFDNISDLDGGPAV
FNIGYMPSFTRNTFRGNVFNCDPETFLNFNKSDDHFGTVCTGCFGECP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence