prot_H-elongata_contig52206.12520.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52206.12520.1
Unique Nameprot_H-elongata_contig52206.12520.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.240e-74
Identity = 105/152 (69.08%), Postives = 126/152 (82.89%), Query Frame = 0
Query:    4 CPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSCMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTDVDVC 155
            CPY I +  EA +R ++ S+PGN+VK+EHL FCRTGNHFS+ F+NLALGYCCKSK+VWLP KDD+LAPGVFN+GTPGPRWFDFS+APDV GF+S +C A ITWAGQRAF M QL++  H  + P L+EC+  APRLL CEAAYYFP DVD+C
Sbjct:   94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLC 245          
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.480e-69
Identity = 112/217 (51.61%), Postives = 140/217 (64.52%), Query Frame = 0
Query:    4 CPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSCMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTDVDVCLDKEPKEAAEGPRTLSGGKNEKRMFDYEEEEEESAGNLVLHVRSGDIFENDVLWYYGQVYGDMYI 220
            C YAI + + AR +  +++I GN+VK+ HL+F RTGN F  V++NLALGYCCK+K VWLP KDD+LAPG+FNEGTPGPRWFDFS+APDV G +   C   I W  + A +M  L+    + Y P +R+C+  APRLLGCEAAYYFP D+ VC  K+    A G R   GG                AGNLVLHVRSGDIF + V+ Y GQ     Y+
Sbjct:   59 CTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGG----------------AGNLVLHVRSGDIFFDRVVPYKGQPPLQFYL 259          
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.160e-66
Identity = 113/228 (49.56%), Postives = 141/228 (61.84%), Query Frame = 0
Query:    1 NKKCPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSCMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTDVDVCL-------DKEPKEAAEGPRTLSGGKNEKRMFDYEEEEEESAGNLVLHVRSGDIFENDVLWYYGQVYGDMYIR 221
            N  CPY + +  E R R  + +IPGN++ I   RF R GN F  +  NL LGYCCKSKLV LP+KDD LAPG+F EGTPGPRW+DF+ APDV+GF++ SC A ITW G+ AF +  L+   H +Y+P L  CV+  PRL GCEAAY+FP  VDVCL       D   ++   G    SG   +K +   EEEE   A  LV+HVRSGDIF +     YGQ     Y+R
Sbjct:  121 NPDCPYILRTPGE-RLRMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRTATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVR 347          
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 3.960e-61
Identity = 109/231 (47.19%), Postives = 139/231 (60.17%), Query Frame = 0
Query:    4 CPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSCMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTD--VDVC-----------------LDKEPKEAAEGPRTLSGGKNEKR------------MFDYEEEEEESAGNLVLHVRSGDIF 203
            CPYAI SE EAR R+ N S PGN+V +    +CR GN F+++ ++L+LGYCCKS+L+ LP KD+ LAPG FNEG PGPR FDFS+APDV+GF+  SC   ITW G  AF +  L   GH +Y P L EC+K  PR+ GCEAAY+FP D  VD+C                 + ++P++ A G R   G + + R                    E SAGNLV+HVRSGDIF
Sbjct:  147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIF 377          
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.140e-58
Identity = 111/246 (45.12%), Postives = 146/246 (59.35%), Query Frame = 0
Query:    4 CPYAIHSEREARARAE------NASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSCMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTDVDVCL----------DKEPKEAAEGPRTLSGGKNEKRMFDYEE-----EEEE-------------SAGNLVLHVRSGDIFENDVLWYYGQVY 215
            CPYAI +E E   R++      N S PGN+V +    +CR GN F ++ ++L+LGYCCKS+LV LP KDD LAPG FN+GTPGPR FDFS+APDV+GF+S SC   I W G +AF ++ L   GH +Y P L  C+K  P ++GCEAAY+FPTD+ V +          +K  ++ +E P+  + G       D+EE     E  E             SAGNLV+HVRSGDIF +     YGQ Y
Sbjct:  146 CPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGI----QLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQYY 387          
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.670e-14
Identity = 67/211 (31.75%), Postives = 92/211 (43.60%), Query Frame = 0
Query:    4 CPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLALGYCCKSKLVWLPSKDDILAPGVFNEG--TPGPRWFDFS-TAPDVKGFESVS-----CMAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPTDVDV---CLDKEPKEAAEGPRTLSGGKNEKRMFDYEEEEEESAGNLVLHVRSGDIF 203
            CP A+ S  +A A  +  +   N + +      R+GNHF  +   LA+G+CC+S+L+ LP  D  + PG    G    G RWFDFS   P   GFE +      C   +      AF        G+ H +  L  C+     L GCE AY     VD+   C  +EP            GK +             AG+LV+H+RSGDIF
Sbjct:   89 CPQAL-SRSQAEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAF--------GYEHIHSRLLRCMNRV-YLRGCEKAYLGKM-VDLEGFCPKQEP------------GKRK------------GAGSLVVHIRSGDIF 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52206.12520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K2F3_9PHAE1.240e-7469.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G610_ECTSI1.480e-6951.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2M2_ECTSI4.160e-6649.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7B3_9PHAE3.960e-6147.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L4_ECTSI1.140e-5845.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV9_ECTSI4.670e-1431.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52206contigH-elongata_contig52206:2528..3733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52206.12520.1mRNA_H-elongata_contig52206.12520.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52206 2528..3733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52206.12520.1 ID=prot_H-elongata_contig52206.12520.1|Name=mRNA_H-elongata_contig52206.12520.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
NKKCPYAIHSEREARARAENASIPGNIVKIEHLRFCRTGNHFSTVFQNLA
LGYCCKSKLVWLPSKDDILAPGVFNEGTPGPRWFDFSTAPDVKGFESVSC
MAHITWAGQRAFRMDQLNTAGHSHYNPILRECVKAAPRLLGCEAAYYFPT
DVDVCLDKEPKEAAEGPRTLSGGKNEKRMFDYEEEEEESAGNLVLHVRSG
DIFENDVLWYYGQVYGDMYIRRRRGTFC*
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