prot_H-elongata_contig5220.12517.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5220.12517.1
Unique Nameprot_H-elongata_contig5220.12517.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length705
Homology
BLAST of mRNA_H-elongata_contig5220.12517.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 1.970e-240
Identity = 425/793 (53.59%), Postives = 510/793 (64.31%), Query Frame = 0
Query:    1 MDGVSFDESSVYGAYESSLVPNLAGRRTAPYAVGLTLDDSAGRFSPSGAVGLVGHMENFFLATYLRDFNRMVPLTSESSVTEGMLEVLSPAVSSRGLATASPIKQPESRRQAKLAVFWGVVAMGSRILGAGDDATAKYLSLMRTALRECFDCNDREARMGFFEEEGGFCVVQAYLLLSTVETMRGNDDAGKRYLDYAHTMHNGNAMGQDGKLIKNRVEQEECLDVVFQMFANPEGRVGG-TASAAV------------SRTSHRSAGAGFVA-----TSAVNQMIEQAMSPPTGSQSGSLKALKFMSTACGLSSEVLDPTQKCVTIRQYLGEIDNALKDANSLFKRTDLSECITGVVMVKILGGVTVLMHSWGQPEDRELGLAQVEEGVDYALTRPGLMTFPMWWHALHTAAIILAHFGQIDTYMRLRATFNKNTFPGTEMPHFEAYSPSAVCPQPKGNCSKLALWFMVRGRRDPDPEWNPKFD-AQPNEKTEDAAYVAALGQQYV-----RACRALEIAEKENTLKGQTEGVVHNITTPLQPEAPSN----ERALRAALDAGLSEIAQFSDPLGPNGAMSLTSLGA----------EFDLSDVDHATANFSPS---------------FLGHALAGGMQ---------------------NGEGARDPVQVPAA-------TSSTGGTVG-------VVGGGELLRHPSFGITGHAAASALVGGMGGMGTSLSFLGGAEPMSRQNSLDLNIIMQMATSDEELIKNKGG-PDAMDRALAFGEGPAKEIFGVDL 704
            +DGV ++E    G Y   L       R  P  V   +D SAGRFS SGAVGL GH+ENFFLATYLRDFNR+VPLT+ESSVTEGMLEVLSPAVSSRGLATA+PIKQPE+RRQA+LAVFWGVVAMGSRILGA D++T +YL LMR+ALRECFDCND+E             VVQAYLLLSTVETMRGN+ AGKRYLD+AHTMHNGNA+G +GKL+++R EQ+  LD+VFQM+  P+G V G   S AV            S TS     +G  +     TSAV+QMI QA+SPP+  QS  LKALK++ST CGLSSEV DPT KCVT++QYL E+D+ALK A+SLF  TDLSECITGVV+VKI GGVT+LM SWGQ EDR++GLAQVEEGV YALTRPGL TFPMWWHALH AAI LAHFG+ DTYMRLRATFNK TFPGTEMP  E YSP++VCPQ  GNCSKLA W  VRG    D EW P+F  ++ ++ +E+AAY AAL ++Y      +   A    E+     G  E   H +  P+   + S+       LRAAL+AGL+EI    + LG  G   L   GA          EFDLS ++        S                 G    G                         G  A + +Q+PA        +S   G+ G       ++GGGE+ R PSFGI+G AA S++ G  G         GGA  +SRQ+SLD+N IMQM TSDE+L KN+GG PDA+D AL +GEGPAKE+FG+DL
Sbjct:  169 IDGVLYEE----GTYGGELA------RANPGGVRRNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKE-------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCADLEWKPQFSRSRLSDASENAAYAAALERRYSCGKHKKRSGAAWCGERW----GAAEAPKHPVPNPVDQVSASDIVEGGSQLRAALNAGLAEIGTPFNDLG--GLDILEGSGADLXXXXXXXSEFDLSQLESPEQVVEASGEAEXXXXXXXXXXXXTGSPAVGATDVPAAGSGXXXXXXXXPGXPGAGGAAAVNSMQIPAGLVAGRSGSSDVAGSRGAGAGAPVIIGGGEISRGPSFGISGPAAVSSIFGPAGASS------GGA--LSRQSSLDINTIMQMVTSDEQLRKNEGGTPDAIDHALEYGEGPAKEMFGIDL 924          
BLAST of mRNA_H-elongata_contig5220.12517.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.440e-59
Identity = 144/424 (33.96%), Postives = 214/424 (50.47%), Query Frame = 0
Query:   44 FSPSGAVGLVGHMENFFLATYLRDFNRMVPLTSESSVTEGMLEVLSPAVSSRGLATASPIKQPESRRQAKLAVFWGVVAMGSRILGAGDDATAKYLSLMRTALRECFDCNDREARMGFFEEEGGFCVVQAYLLLSTVETMRGNDDAGKRYLDYAHTMHNGNAMGQDGKLIKNRVEQEECLDVVFQMFANPEGRVGGTASAAVSRTSHRSAGAGFVATSAVNQMIEQAMSPPTGSQSGSLKALKFMSTACGLSSEVLDPTQKCVTIRQYLGEIDNALKDANSLFKRTD-LSECITGVVMVKILGGVTVLMHSWGQPEDREL----------GLAQVEEGVDYALTRPGLMTFPMWWHALHTAAIILAHFGQIDTYMRLRATFNKNTFPGTEMPHFEAYSPSAVCPQPKGNCSKLALWFMVRGRRD 456
            F+ S A+GLVGH+EN F+A Y+RD N  +P+TSE +V  GMLE        + L  A+       RR AKLAVFWGVVA+GSRILGA      +Y + +  ALR+CFD +D               VVQAYLLL ++ETM GN    +RY+ +A T+H   A  +   + +    Q E L+ + Q+F               + +   +A    VA +A ++M++      TG     + AL+       ++ +VLDP   C  +  +L  ++NA      +   +  L++C+  V    I  G+T+ M    Q                GL +V  G++ A++RPGLMTFP+WWH +H AAI L H G    Y R +A F+ + +PGT++P F+A++   VC      C +   W + R  RD
Sbjct:  282 FTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLET------GKSLVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDP-------------MVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH---ASLRAKSVQEQHQAQLEGLETLLQVFGARMCECDAVDEGPCTASGANTA----VAAAACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMSGRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGA-DNLCRQYQAWLLRRMPRD 678          
BLAST of mRNA_H-elongata_contig5220.12517.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.240e-33
Identity = 115/433 (26.56%), Postives = 179/433 (41.34%), Query Frame = 0
Query:   42 GRFSPSGAVGLVGHMENFFLATYLRDFNRMVPLTSESSVTEGMLEVLSPAVSSRGLATASPIKQPESRRQAKLAVFWGVVAMGSRILGAGDDATAKYLSLMRTALRECFDCNDREARMGFFEEEGGFCVVQAYLLLSTVETMRGNDDAGKRYLDYAHTMHNGNA--MGQDGKLIKNRVEQEECL------------DVVFQMFANPEGRVGGTASAAVSRTSHRSAGAGFVATSAVNQMIEQAMSPPTGSQSGSLKALKFMSTACGLSSEVLDPTQKCVTIRQYLGEIDNALKDANSLFKRTDLSECITGVVMVKILGGVTVLMHSWGQPEDRELGLAQVEEGVDYALTRPGLMTFPMWWHALHTAAIILAHFGQIDTYMRLRATFNKNTFPGTEMPHFEAYSPS--AVCPQPKGNCSKLALWFMVRGRRDPD 458
            G F    A GLVG +EN+FLA+YL+D +   PL  ES V  GM++  +                                          D A A        AL  CFD  D +             VV+AYLLL T+ +M GN    KRY  ++ T+H G A  M +D   +++     + L            D + +   NPEG                              + + ++    G     + AL+ M    G +S+ LD    C  +R  L  +++A     ++   + L +C+       +  G+T++M          +G+  +E G++ A+TRPGL+TF +WWH LH AAI +AH  ++DTY+RL+  ++++T PGT++P    Y     +VC  P   C +   W   R  RD D
Sbjct:  772 GSFRAGPATGLVGRLENYFLASYLKDLHGFTPLACESIVVRGMMQAFA------------------------------------------DRAAA--------ALGACFDEPDVQ-------------VVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLAGQMREDSSWLESECALLQTLIQAYGPRLLDSPDAMRKPPDNPEGI----------------------------DVPQMSLMAQRGHVRSPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQG-----RLAMGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVC-GPDQYCQQFRHWLERRLPRDCD 1107          
BLAST of mRNA_H-elongata_contig5220.12517.1 vs. uniprot
Match: A0A835ZE19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE19_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.810e-5
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 0
Query:   43 RFSPSGAVGLVGHMENFFLATYLRDFNRMVPLTSESSVTEGMLEVLSPAVSSRGLATASPIKQPESRRQAKLAVFWGVVAMGSRILGAGDDATAKYLSLMRTALR 147
            RFS S AVG+VGH+EN FL+T+LRDF+  +P+  E  V   ++  +         A A+           +L+  W  +A+G+ + GA +     Y +L   A R
Sbjct: 1170 RFSASPAVGIVGHIENSFLSTFLRDFSSFLPIVGEVPVRRSLVRAMRADAGGGAAAVAAD--------SLELSTLWASIALGAILQGADELQLRHYANLSVCAAR 1266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5220.12517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JUL1_9PHAE1.970e-24053.59Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A836CBP3_9STRA1.440e-5933.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YR83_9STRA5.240e-3326.56Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835ZE19_9STRA3.810e-532.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5220contigH-elongata_contig5220:1669..8418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5220.12517.1mRNA_H-elongata_contig5220.12517.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5220 1651..11321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5220.12517.1 ID=prot_H-elongata_contig5220.12517.1|Name=mRNA_H-elongata_contig5220.12517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=705bp
MDGVSFDESSVYGAYESSLVPNLAGRRTAPYAVGLTLDDSAGRFSPSGAV
GLVGHMENFFLATYLRDFNRMVPLTSESSVTEGMLEVLSPAVSSRGLATA
SPIKQPESRRQAKLAVFWGVVAMGSRILGAGDDATAKYLSLMRTALRECF
DCNDREARMGFFEEEGGFCVVQAYLLLSTVETMRGNDDAGKRYLDYAHTM
HNGNAMGQDGKLIKNRVEQEECLDVVFQMFANPEGRVGGTASAAVSRTSH
RSAGAGFVATSAVNQMIEQAMSPPTGSQSGSLKALKFMSTACGLSSEVLD
PTQKCVTIRQYLGEIDNALKDANSLFKRTDLSECITGVVMVKILGGVTVL
MHSWGQPEDRELGLAQVEEGVDYALTRPGLMTFPMWWHALHTAAIILAHF
GQIDTYMRLRATFNKNTFPGTEMPHFEAYSPSAVCPQPKGNCSKLALWFM
VRGRRDPDPEWNPKFDAQPNEKTEDAAYVAALGQQYVRACRALEIAEKEN
TLKGQTEGVVHNITTPLQPEAPSNERALRAALDAGLSEIAQFSDPLGPNG
AMSLTSLGAEFDLSDVDHATANFSPSFLGHALAGGMQNGEGARDPVQVPA
ATSSTGGTVGVVGGGELLRHPSFGITGHAAASALVGGMGGMGTSLSFLGG
AEPMSRQNSLDLNIIMQMATSDEELIKNKGGPDAMDRALAFGEGPAKEIF
GVDL*
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