prot_H-elongata_contig52173.12508.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52173.12508.1
Unique Nameprot_H-elongata_contig52173.12508.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
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BLAST of mRNA_H-elongata_contig52173.12508.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 9.100e-31
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 0 
Query:    1 LAPLGVPPPRGSAGRSTGSFQVRNVSDETVSVTLRASPVPEMASVLSLGAYLQLQDSSNGIYAPAGAAGRPSPSVALLPGDTLDVHAECLVQPGACLTAEL 101
            LAPL +PP RG+AGR  GSFQ++NVS ETVSV L   P PE+A VLSLGA +Q QDSS G+YA  GA GR SP+VALLPGD LDV AECL  PGA L  EL
Sbjct: 3758 LAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVMLGVMPAPEVAGVLSLGASMQ-QDSSAGVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPEL 3857
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BLAST of mRNA_H-elongata_contig52173.12508.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.690e-30
Identity = 67/101 (66.34%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:    1 LAPLGVPPPRGSAGRSTGSFQVRNVSDETVSVTLRASPVPEMASVLSLGAYLQLQDSSNGIYAPAGAAGRPSPSVALLPGDTLDVHAECLVQPGACLTAEL 101
            LAPL +PP RG+AGR  GSFQ++NVS ETVSV L  +P PE+  VLSLGA +Q QDSS G+YA  GA GR SP VALLPGD LDV AECL  PGA L  EL
Sbjct: 2023 LAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVMLGVTPAPEVVGVLSLGASMQ-QDSSTGVYASVGADGRSSPPVALLPGDVLDVQAECLALPGARLPPEL 2122
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52173.12508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH6_ECTSI9.100e-3167.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWQ8_9PHAE1.690e-3066.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52173contigH-elongata_contig52173:1710..2012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52173.12508.1mRNA_H-elongata_contig52173.12508.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52173 1710..2012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52173.12508.1 ID=prot_H-elongata_contig52173.12508.1|Name=mRNA_H-elongata_contig52173.12508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
LAPLGVPPPRGSAGRSTGSFQVRNVSDETVSVTLRASPVPEMASVLSLGA
YLQLQDSSNGIYAPAGAAGRPSPSVALLPGDTLDVHAECLVQPGACLTAE
L
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