prot_H-elongata_contig52132.12502.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52132.12502.1
Unique Nameprot_H-elongata_contig52132.12502.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.120e-83
Identity = 144/197 (73.10%), Postives = 156/197 (79.19%), Query Frame = 0
Query:    1 GGVKWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            GGVKWAVTELLDVSDFD+LVPRPAHRFPFTLDGFQKQAVARLE  ++ + +                      +  + YT  P +      +  F +RFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWV+FDEVHYVNDSERGVVWEEVIIMLP+HANMIFLSATTPNTVEFCDWIGRTKRKPV
Sbjct:  408 GGVKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLE-RAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTS-PIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPV 602          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.250e-81
Identity = 142/195 (72.82%), Postives = 154/195 (78.97%), Query Frame = 0
Query:    3 VKWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            VKWAVTELLDVSDFD+LVPRPAHRFPFTLDGFQKQAVARLE  ++ + +                      +  + YT  P +      +  F +RFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWV+FDEVHYVNDSERGVVWEEVIIMLP+HANMIFLSATTPNTVEFCDWIGRTKRKPV
Sbjct:  565 VKWAVTELLDVSDFDALVPRPAHRFPFTLDGFQKQAVARLE-RAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTS-PIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPV 757          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A835YZN6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN6_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.540e-75
Identity = 124/194 (63.92%), Postives = 140/194 (72.16%), Query Frame = 0
Query:    5 WAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            WAVT  LDVSDF SLVP PA  +PF LD FQKQAVARLE   + + +                      +  + YT  P +      +  F  RFGD VGLITGDVSINPEASCLIMTTEILRSMLYRGAD++RDIEWV+FDEVHY+ND+ERGVVWEEVIIMLP+HA MIFLSATTPNT+EF DWIGRTK+KPV
Sbjct:   16 WAVTASLDVSDFRSLVPNPAIEYPFELDAFQKQAVARLE-RRECVFVAAHTSAGKTVVAEYAIALAAAHMTRAIYTS-PIKALSNQKYRDFKKRFGDDVGLITGDVSINPEASCLIMTTEILRSMLYRGADIVRDIEWVIFDEVHYINDTERGVVWEEVIIMLPEHAGMIFLSATTPNTIEFSDWIGRTKKKPV 207          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A7S1XU58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU58_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.120e-74
Identity = 124/195 (63.59%), Postives = 138/195 (70.77%), Query Frame = 0
Query:    5 WAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            WAVT LLDVSDF+ LVPRPA  +PF LDGFQKQAV RLE   DV V                         C  YT  P +      F  F  RFG  +VG++TGDVS+NPEA C+IMTTEILRSMLYRGADL+RD+EWVVFDEVHYVNDSERGVVWEEVIIMLP +  M+FLSATTPNT EFC+WIGRTKR+PV
Sbjct:   14 WAVTALLDVSDFERLVPRPAAEWPFELDGFQKQAVCRLEQKEDVFVAAHTSAGKTVVAEYAVALALRNGTRCV-YTS-PIKALSNQKFRDFKERFGAENVGIVTGDVSVNPEAPCVIMTTEILRSMLYRGADLVRDLEWVVFDEVHYVNDSERGVVWEEVIIMLPSYVGMVFLSATTPNTTEFCEWIGRTKRRPV 206          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A7R9U769_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U769_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.550e-65
Identity = 115/194 (59.28%), Postives = 139/194 (71.65%), Query Frame = 0
Query:    5 WAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            WAVT+LL ++DF  ++P PA  +PF LDGFQKQAV RLE   DV V                         C  YT  P +      +  F +R+GD VG++TGDVS+NP+ASC++MTTEILRSMLYRGADL+RD+EWV+FDEVHYVNDSERGVVWEEVIIMLP +  M+FLSATTPNT+EFC+WIGRTKR+PV
Sbjct:  333 WAVTQLLRITDFRRMIPHPAIEYPFELDGFQKQAVCRLEQKEDVFVAAHTSAGKTVVAEYAIALAMRNGTRCV-YTS-PIKALSNQKYRDFRTRYGDDVGIVTGDVSVNPDASCVVMTTEILRSMLYRGADLVRDLEWVIFDEVHYVNDSERGVVWEEVIIMLPAYVGMVFLSATTPNTIEFCEWIGRTKRRPV 524          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A5A8CCV7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCV7_CAFRO)

HSP 1 Score: 214 bits (545), Expect = 1.170e-60
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = 0
Query:    5 WAVTELLDVSDFDSLVPR--PAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            WAVT  +   + D+   R  PA  FPFTLD FQ++AVA ++    V V                         C  YT  P +      +  F  RFGDVGL+TGD+S++PEASCL+MTTEILRSMLYRG+D++RDIEWV+FDEVHYVNDSERGVVWEE II+LPDH  M+FLSATTPNTVEFC+WIGRTKR+PV
Sbjct:  195 WAVTRRMTAEELDAAEARRTPALEFPFTLDTFQREAVAHVDEGESVFVAAHTSAGKTVVAEYAIAQCARNCTRCI-YTS-PIKALSNQKYRDFKDRFGDVGLVTGDISVDPEASCLVMTTEILRSMLYRGSDVVRDIEWVIFDEVHYVNDSERGVVWEETIILLPDHVGMVFLSATTPNTVEFCEWIGRTKRRPV 387          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A5A8EJT6_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EJT6_CAFRO)

HSP 1 Score: 214 bits (545), Expect = 1.200e-60
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = 0
Query:    5 WAVTELLDVSDFDSLVPR--PAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            WAVT  +   + D+   R  PA  FPFTLD FQ++AVA ++    V V                         C  YT  P +      +  F  RFGDVGL+TGD+S++PEASCL+MTTEILRSMLYRG+D++RDIEWV+FDEVHYVNDSERGVVWEE II+LPDH  M+FLSATTPNTVEFC+WIGRTKR+PV
Sbjct:  680 WAVTRRMTAEELDAAEARRTPALEFPFTLDTFQREAVAHVDEGESVFVAAHTSAGKTVVAEYAIAQCARNCTRCI-YTS-PIKALSNQKYRDFKDRFGDVGLVTGDISVDPEASCLVMTTEILRSMLYRGSDVVRDIEWVIFDEVHYVNDSERGVVWEETIILLPDHVGMVFLSATTPNTVEFCEWIGRTKRRPV 872          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A2P6N2L6_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2L6_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 2.130e-60
Identity = 112/197 (56.85%), Postives = 131/197 (66.50%), Query Frame = 0
Query:    1 GGVKWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            G  +WA+ E +DVSDF  LVP  A  +PF LDGFQK+AV  LE   + + I                      +  + YT  P +      F  F S FGDVGLITGDV I PEASCLI+TTEILRSMLYRGAD+IRD+EWV+FDEVHYVND +RGVVWEEVIIMLP H N+I LSAT PNT EF DW+GRTK+K +
Sbjct:  386 GREEWAIMEPIDVSDFQELVPEMAIDYPFDLDGFQKEAVIHLE-RGESVFIGAHTSAGKTVVAEYAIALAAKHMTRAIYTS-PIKALSNQKFRDFKSTFGDVGLITGDVQIKPEASCLILTTEILRSMLYRGADIIRDVEWVIFDEVHYVNDMDRGVVWEEVIIMLPAHVNIILLSATVPNTYEFADWVGRTKKKKI 580          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: A0A1V9ZLM2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.130e-60
Identity = 113/197 (57.36%), Postives = 138/197 (70.05%), Query Frame = 0
Query:    3 VKWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            ++WA  E +DVS+F + VP  A +FPF LD FQKQAV  LE N D + I                      +  + YT  P +      +  F ++FG  +VGLITGDVSINP+ASCL+MTTEILRSMLYRGAD+IRDIEWV+FDE+HY+NDSERGVVWEEVIIMLP+H +M+FLSATTPNT EF DWIGRTK+K +
Sbjct:  370 LEWASAEPVDVSNFHAKVPDMAMQFPFELDSFQKQAVVHLE-NHDCVFIAAHTSAGKTVVAEYAIAMSQKHMTRTIYTS-PIKALSNQKYRDFRTKFGVDNVGLITGDVSINPQASCLVMTTEILRSMLYRGADVIRDIEWVIFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKI 564          
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Match: L8H4E3_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4E3_ACACA)

HSP 1 Score: 212 bits (539), Expect = 7.390e-60
Identity = 110/194 (56.70%), Postives = 132/194 (68.04%), Query Frame = 0
Query:    4 KWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIVIXXXXXXXXXXXXXXXXXXXXIKLWCSSYTFFPSRTALLVPFSLFYSRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYVNDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPV 197
            +WA+ +  DVS+F+ +VP  A  +PF LD FQK+AV  LE N + + +                      +  + YT  P +      +  F   FGDVGLITGDVSI PEASCLI+TTEILRSMLYRGADLIRD+EWV+FDEVHYVND ERGVVWEEVIIMLPDH N+I LSAT PNT+EF DWIGRTK+K +
Sbjct:  375 EWAIMDNSDVSNFEEIVPEMALEYPFDLDVFQKRAVCHLE-NGESVFVAAHTSAGKTVVAEYAIALASKHMTRTIYTS-PIKALSNQKYRDFKETFGDVGLITGDVSIKPEASCLILTTEILRSMLYRGADLIRDVEWVIFDEVHYVNDIERGVVWEEVIIMLPDHVNLILLSATVPNTLEFADWIGRTKKKNI 566          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52132.12502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP96_9PHAE1.120e-8373.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJL2_ECTSI1.250e-8172.82DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YZN6_9STRA3.540e-7563.92P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1XU58_9STRA1.120e-7463.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9U769_9STRA1.550e-6559.28Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A5A8CCV7_CAFRO1.170e-6056.41Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EJT6_CAFRO1.200e-6056.41Uncharacterized protein n=6 Tax=Cafeteria roenberg... [more]
A0A2P6N2L6_9EUKA2.130e-6056.85Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A1V9ZLM2_9STRA2.130e-6057.36DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
L8H4E3_ACACA7.390e-6056.70Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 27..198
e-value: 0.0067
score: 17.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 83..197
score: 13.885
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 115..184
e-value: 1.7E-6
score: 27.9
NoneNo IPR availableGENE3D3.40.50.300coord: 9..202
e-value: 2.6E-43
score: 149.4
NoneNo IPR availablePANTHERPTHR12131:SF15DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11coord: 5..198
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 5..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52132contigH-elongata_contig52132:1675..3254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52132.12502.1mRNA_H-elongata_contig52132.12502.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52132 1675..3254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52132.12502.1 ID=prot_H-elongata_contig52132.12502.1|Name=mRNA_H-elongata_contig52132.12502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
GGVKWAVTELLDVSDFDSLVPRPAHRFPFTLDGFQKQAVARLEFNSDVIV
IVIYIVIGKPIMVMVMVMFVFIKLWCSSYTFFPSRTALLVPFSLFYSRFG
DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVVFDEVHYV
NDSERGVVWEEVIIMLPDHANMIFLSATTPNTVEFCDWIGRTKRKPVRQD
YVLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase