prot_H-elongata_contig51982.12479.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51982.12479.1
Unique Nameprot_H-elongata_contig51982.12479.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length460
Homology
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI)

HSP 1 Score: 642 bits (1655), Expect = 1.220e-223
Identity = 332/462 (71.86%), Postives = 382/462 (82.68%), Query Frame = 0
Query:    1 MSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSP-QVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGG-----RGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGGGGYGKQ 456
            MSP GEHV +V+DVL+VGQVVDVRIREVDEKLGRINMSLLPYG+GE  +++P   TKDVSHL GSDP EFRKG++SAV DYGLFVNI+GVDGLLHVSKM            +DRSI S NIH  Y EGQEVE+RI+EVN   NKMSLSMLP TE+ DF +Y N+  +EWL+GTVVS+MNYGAFV+L+  VDGMVHISQ+ P GER+DSVYN+V+IG  VRVRI+E D ++R++RLTMR+          GG MG         RG K+ KSVE+FL+LS EEWI G VASIT+FGAFVAVD+DTDGLLHISQIAEDHVSNVEDHLQ+GQ++QVRVIEVDVDNCRLGLSMREPRQ++PRG   RGKKDVS+LLGRDP+EFI GRVVSIVPYGAFVNIEGNIDGLVHISEMA+GRVDS EDV +MGQEVQVRISD+N DNNT+NLSMVP G+YD+  GGGYG +
Sbjct:  247 MSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMS-----------TDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGAT---GGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGA--RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDE 692          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA)

HSP 1 Score: 360 bits (923), Expect = 4.180e-114
Identity = 203/447 (45.41%), Postives = 282/447 (63.09%), Query Frame = 0
Query:    1 MSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGE-RIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGN--IDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGS 444
            + P  E V  V+DV++VGQ V VR+R+VD+ L R+N+SLLP        TS   TKDVS L  +D A FR G++SAV DYG FV +DGVDGLLH+SK+  EGV  T             + E  S GQEV VRIL V+V  NK+SL+M+ D  + D S     SP+EW++G+VVS   YGAFV L +G+DGMVHIS++   GE R+D+V + + +GDAV+VR+IE    AR++RL+MR+         G    G   GRG +  K V  +  + AEEW+EG V S T FGAFVA+    DGLLH+S++A   V   +D L  GQ+I+VRVI+VD +  R+GLS+R+ R++          +D+S+L G D   F+ G V S+V YG FV ++    I+GL+H+S+++  RV+   DVV  G +VQVR+ +V++D   +NLSM+P GS
Sbjct:  206 LKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGA----TSAAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIE-EGVALT----------PAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARRAPV-------SRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGS 627          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA)

HSP 1 Score: 306 bits (784), Expect = 5.270e-93
Identity = 178/456 (39.04%), Postives = 264/456 (57.89%), Query Frame = 0
Query:    1 MSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTS-PQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAP---------RGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIE--GNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGS 444
            + P  E V +  D LS GQ V VRIREVD +L RI++SLLP  EG +  +S     +DVS + G+DPAEFR G++ ++ +YG+FV +DGVDGLLH S++  EG          R ++   +   ++ GQ+V VR+  V+   N++SLSM+P     D S++  + PD W+DG V +   +GAFV + +GVDG+VHISQ+  + +   +V + V +GDAVRVR+IE D   RR                          RG   VK V +++    E W++G VA++  FGAFV +D   DGL+H SQI        ED L  GQ ++VRV+  D +  RL LSM +P ++A          +  G    +DVS+L G DP+ F+TG V S++P+G FV ++  G + GL+H+SE++ GRV+   +VV  G  ++VR+ +V+     I+LSM+ PGS
Sbjct:  226 LRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIE-EG----------RQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPE-RRXXXXXXXXXXXXXXXXXXXXXXXXXRRG---VKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGS 664          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X8ZLE9_9BACT (30S ribosomal protein S1 n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X8ZLE9_9BACT)

HSP 1 Score: 190 bits (482), Expect = 1.480e-50
Identity = 125/390 (32.05%), Postives = 210/390 (53.85%), Query Frame = 0
Query:   66 PAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLP------DTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNE 448
            P + R+G +  + D+G FV++DG+DGLLH++ M       +   VSD        HE    G E+EV IL+++    ++SL +        DT DV + K   +       G VV++M YGAF++LEEG++G+VH+S+M    ++I    + +Q+GD V   I+  +   R+I L +R     P P E               +K  EKF   +    I+G V ++T +GAFV + +D DG++H+S ++    ++N  + LQ G +++  ++EVD DN R+ LSM++  +   +          ++    D  + + G+V  +  +GAFV +EG IDGL+HISE++  RV+  +DVVQ+G  V+ R+ +++++   I LSM     Y  E
Sbjct:  187 PKQIRRGVVKNITDFGAFVDLDGMDGLLHITDM-------SWGRVSDP-------HEIVKVGDEIEVMILDIDKERQRVSLGLKQKEGNPWDTVDVKYPKNTRIH------GKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDVLQVGDEVDAVILNVNKEDRKISLGLRQAQ--PNPWE--------------VIK--EKFPSGTR---IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEILQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQ----------NIQNRYDIGDVVEGKVTKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMRENSEYQQE 524          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3E0NAW3_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NAW3_9BACT)

HSP 1 Score: 187 bits (475), Expect = 2.230e-49
Identity = 123/423 (29.08%), Postives = 214/423 (50.59%), Query Frame = 0
Query:   17 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 438
            +G+ +  ++ ++D+    I +S     E E  K    + K++      +  + RKG +  + D+G FV++ G+DGLLH++ M    +              G+  E  +  QE+EV++L ++    K++L +   T     +  E     E L GTVV++M+YGAFVKLEEG++G+VHIS+M     RI+     V IGD + V ++  +     I L M+     P                    K  E++     E  ++G V ++TN+GAF+ ++E  DGLLH+S ++    +S+  + L+ GQ+I  +VI VD    R+ L +++  +  P       K          P + + G V  +  +G FV +E  ++GL+HISE+A  ++++ EDVV+ G+E++V++  V+ D   I LS
Sbjct:  174 IGRTIQCKVLKIDDARRNIVVSRRSLIEDERKKQKDNLLKEL------EVGQLRKGVVKNIADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMVNIDQEIEVQVLHIDYEKEKIALGLKQKTPSPWAAAIEKYPVGERLKGTVVNVMSYGAFVKLEEGIEGLVHISEMS-WTRRINHPSELVAIGDEIDVVVLGINQEKEEISLGMKQTQSNPWD------------------KVAEQY---PPESMVKGVVRNLTNYGAFIEIEEGIDGLLHVSDMSWTRKISHPSEMLEKGQEIDCKVISVDQQRRRIALGLKQLSED-PWANDIPSKYQ--------PGQIVKGTVTKLTNFGVFVGLENGLEGLLHISELADDKIENPEDVVKEGEEIEVKVLRVDTDERKIGLS 545          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: E8R5M0_ISOPI (SSU ribosomal protein S1P n=2 Tax=Isosphaera pallida TaxID=128 RepID=E8R5M0_ISOPI)

HSP 1 Score: 187 bits (474), Expect = 2.640e-49
Identity = 127/399 (31.83%), Postives = 210/399 (52.63%), Query Frame = 0
Query:   61 LVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGGGGYGKQLL 458
            L   +P + RKG +  + D+G FV++ G+DGLLH++ M            S   IN  N  +  +   E+EV ++ V+    K++L +   T     +  E       + G VV++M+YGAFVKLEEG++G+VHIS+M    +RI+     V IGD V V ++  +   + I L M+     P                +K   + E          IEGTV ++TN+GAF+ ++E  DGLLHIS ++    + +  + LQ G+ I+ +V+ VD +  R+ L +++ R+          + D+       PN+ +TG+V  +  +G FV +E  ++GL+HISE++  +V+S +DVVQ+GQE++VR+  V+ +   I LS+  P S D   G   G++ L
Sbjct:  204 LAEIEPGQIRKGVVKNIADFGAFVDLGGIDGLLHITDM------------SWGRIN--NPTDMVAINDEIEVYVIHVDKEKEKIALGLKQKTASPWDNVAEKYPVGSKVTGEVVNVMSYGAFVKLEEGIEGLVHISEMS-WTKRINHPSELVNIGDKVEVVVLNINKEKQEISLGMKQTQINPWDQVA-----------VKYPPNTE----------IEGTVRNLTNYGAFIEIEEGIDGLLHISDMSWTRKIGHPNELLQKGERIRCQVLSVDQERKRIALGLKQLREDP-------WENDIPKRY--QPNQMVTGKVTKLTNFGVFVELEPGLEGLLHISELSDQKVESPDDVVQLGQEIEVRVLRVDRNERKIGLSLKKPPS-DEVAGAELGERQL 556          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X7MGL5_9BACT (S1 RNA-binding domain-containing protein n=1 Tax=Oligosphaeraceae bacterium TaxID=2699751 RepID=A0A7X7MGL5_9BACT)

HSP 1 Score: 182 bits (461), Expect = 4.900e-49
Identity = 120/392 (30.61%), Postives = 211/392 (53.83%), Query Frame = 0
Query:   66 PAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLP------DTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGG 450
            P + R+G +  + ++G FV++DG+DGLLH++ M       +   VSD        HE    G E+EV IL+++    ++SL +        DT DV + K   +       G VV++M YGAF++LEEG++G+VH+S+M    ++I    + +Q+G+ V   I+  + + R+I L +R     P                 + +K  E+F   +    I+G V ++T +GAFV + +D DG++H+S ++    ++N  + LQ G +++  ++EVD DN R+ LSM++  +   +    R        +G    + + G++  +  +GAFV +EG IDGL+HISE++  RV+  +DVVQ+G  V+ R+ +++++   I LSM     +  E G
Sbjct:   11 PKQIRRGVVKNITEFGAFVDLDGMDGLLHITDM-------SWGRVSDP-------HEIVKVGDEIEVMILDIDKERQRVSLGLKQKEGNPWDTVDVKYPKNTRIH------GKVVNVMPYGAFIELEEGIEGLVHVSEMS-WTKKITRASDMLQVGEEVDAVILNVNKDDRKISLGLRQAQANP----------------WEVIK--ERFPSGTR---IKGKVRNMTGYGAFVQIQDDIDGMIHVSDMSWTRKINNPNEVLQKGMEVEAVILEVDADNQRISLSMKQLTEDPWQNIQNR------YAIG----DSVEGKITKLASFGAFVELEGGIDGLIHISELSEERVNRVKDVVQVGDVVKARVKNISLEERRIGLSMKENVEFHQESG 350          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3L7RGE8_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RGE8_9BACT)

HSP 1 Score: 186 bits (472), Expect = 5.000e-49
Identity = 125/424 (29.48%), Postives = 219/424 (51.65%), Query Frame = 0
Query:   17 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGS-DPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 438
            +G+VV   + ++DE    I +S     E        Q  +D  HL+   +  + RKG +  + D+G FV++ G+DGLLH++ M  E +              G+  E  +  QE+EV+IL+++    K++L +     +   +  E       + G VV++M+YGAFVKLE G++G+VHIS+M     RI+     VQIGD + VRI+  D   +++ L ++     P                      + +    +AE  + G V ++TN+GAF+ ++E  DGLLH+S ++    +S+  + LQ GQ I+ RV+ VD    R+ L M++               + S+     P + ++G+V  I  +G FV +E N++GL+HISE++  ++++ E++V++G E++V++  V+ D   I LS
Sbjct:  175 IGRVVQCEVLKIDEARRNIVVSRRSLIE-------KQREEDREHLMAELEIGQIRKGVVKNIADFGAFVDLGGIDGLLHITDMSWERI--------------GHPTEMVAIDQEIEVKILQIDREKQKIALGLKQKQNNPWTNIAEKFPVGSTVPGEVVNVMSYGAFVKLEPGIEGLVHISEMS-WTRRINHPSEMVQIGDKIDVRILGVDPQGQQLSLGIKQTQANP-------------------WDDILQRYPENAE--VAGKVRNLTNYGAFIELEEGIDGLLHVSDMSWTRKISHPSEVLQKGQQIKCRVLSVDQTRRRIALGMKQLDDDP---------WNTSIPEKYKPGQLVSGKVTKITNFGVFVGLEDNLEGLLHISELSDNKIENPEEIVKVGDEIEVKVLRVDSDERKIGLS 546          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A3M1RCY3_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RCY3_9BACT)

HSP 1 Score: 186 bits (473), Expect = 6.820e-49
Identity = 127/388 (32.73%), Postives = 208/388 (53.61%), Query Frame = 0
Query:   56 KDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDT----EDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLS 438
            K    L   +P + RKG +  + D+G FV++ G+DGLLH++ M    +              G+  E  S   E+EV IL+VN    K++L +   T    EDV+  KY   S    + GTVV++M YGAFVKLE+G++G+VHIS+M    +RI+     VQ+GD + V ++  D   + I L ++     P                    ++ EK+ + S    ++G V ++TN+GAF+ ++E  DGLLH+S ++    +S+  + LQ GQ+I+ RV+ VD +  R+ L +++  +          + D+       P + + G V  I  +G FV +E  ++GL+HISE+A  +VDS E+VV++G+E++V+I  V+ D   I LS
Sbjct:  207 KKAKLLAELEPGQIRKGVVKNIADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMVSIDDEIEVVILDVNREKEKVALGLKQKTPSPWEDVEV-KYPVGSR---VKGTVVNVMTYGAFVKLEDGIEGLVHISEMS-WTKRINHPTEVVQVGDEIEVVVLRIDKEKQEISLGIKQTQENPWD------------------RAAEKYPEGSI---VKGVVRNLTNYGAFIELEEGIDGLLHVSDMSWTRKISHPSEILQRGQEIECRVLSVDQNRHRIALGLKQLTEDP-------WEHDIPQRYA--PGQIVKGTVTKITNFGVFVGLEDGLEGLLHISELADHKVDSPEEVVKVGEEIEVKILRVDTDERKIGLS 545          
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Match: A0A7X8UMT8_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8UMT8_9BACT)

HSP 1 Score: 184 bits (467), Expect = 3.650e-48
Identity = 130/424 (30.66%), Postives = 220/424 (51.89%), Query Frame = 0
Query:   17 VGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKTSPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRREGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLPDTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHPQGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGGGMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDGLLHISQIAEDH-VSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSAPRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHISEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSM 439
            +GQ +D +I ++D++   I +S     E    +    +  ++         + RKG +  + D+G FV++ G+DGLLH++ M    +              G+  E  S GQE+EV +L V+    K+SL +   +E+              L G VV++M+YGAFV+LEEG++G+VHIS+M     RI+     V +GD V V ++E D + + I L M+  +  P                   VK  EK+   +    I GTV ++TN+GAFV ++E  DGLLH+S ++    V +  + L+ GQ++Q  V+ VD +  R+ L +++  +        R   D  L     P + + G+V  I  +G FV +E  ++GL+H+SE+A  +V++ +DVV++G E++V+I  V+ D+  I LS+
Sbjct:  170 IGQRIDAKILKIDQERRNIVVSRRKLIEERRAEAKHDLLNEIIE------GQSRKGIVKNLADFGAFVDLGGLDGLLHITDMSWGRI--------------GHPSEMLSIGQEIEVVVLSVDRDKEKISLGLKQKSENPWDQVEAKFPASTRLKGKVVNIMSYGAFVQLEEGLEGLVHISEMS-WTRRINHPSEVVNVGDEVEVIVLEVDRDKQEISLGMKQAETNP----------------WTLVK--EKYPPGTV---ITGTVRNMTNYGAFVEIEEGIDGLLHVSDLSWTRKVGHPSEVLKKGQELQCVVLAVDEEKMRVALGLKQLTEDP----WLRQIPDHYL-----PGQIVCGKVTKITNFGVFVELEDELEGLLHVSELADHKVENPKDVVKVGDEIEVKILRVDSDDRKIGLSL 542          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51982.12479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY2_ECTSI1.220e-22371.8630S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CHC1_9STRA4.180e-11445.4130S ribosomal protein S1 n=1 Tax=Tribonema minus T... [more]
A0A835YL04_9STRA5.270e-9339.0430S ribosomal protein S1 n=1 Tax=Tribonema minus T... [more]
A0A7X8ZLE9_9BACT1.480e-5032.0530S ribosomal protein S1 n=1 Tax=Lentisphaerae bac... [more]
A0A3E0NAW3_9BACT2.230e-4929.0830S ribosomal protein S1 n=1 Tax=Planctomycetes ba... [more]
E8R5M0_ISOPI2.640e-4931.83SSU ribosomal protein S1P n=2 Tax=Isosphaera palli... [more]
A0A7X7MGL5_9BACT4.900e-4930.61S1 RNA-binding domain-containing protein n=1 Tax=O... [more]
A0A3L7RGE8_9BACT5.000e-4929.4830S ribosomal protein S1 n=1 Tax=Planctomycetes ba... [more]
A0A3M1RCY3_9BACT6.820e-4932.7330S ribosomal protein S1 n=1 Tax=Planctomycetes ba... [more]
A0A7X8UMT8_9BACT3.650e-4830.6630S ribosomal protein S1 n=1 Tax=Planctomycetes ba... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00681RIBOSOMALS1coord: 7..23
score: 23.53
coord: 179..198
score: 60.71
coord: 220..238
score: 32.33
NoneNo IPR availableGENE3D2.40.50.140coord: 66..152
e-value: 1.1E-14
score: 56.2
NoneNo IPR availableGENE3D2.40.50.140coord: 153..241
e-value: 4.6E-20
score: 73.2
NoneNo IPR availableGENE3D2.40.50.140coord: 271..352
e-value: 3.9E-24
score: 86.3
NoneNo IPR availableGENE3D2.40.50.140coord: 7..44
e-value: 1.1E-5
score: 27.2
NoneNo IPR availableGENE3D2.40.50.140coord: 370..441
e-value: 3.8E-22
score: 79.9
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 272..345
coord: 6..39
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 371..439
coord: 118..238
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 371..439
coord: 118..238
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 71..99
coord: 272..345
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 6..39
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 71..99
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 273..344
e-value: 3.8E-18
score: 76.3
coord: 164..237
e-value: 6.6E-18
score: 75.5
coord: 369..440
e-value: 2.0E-21
score: 87.1
coord: 65..149
e-value: 6.2E-13
score: 59.0
IPR003029S1 domainPFAMPF00575S1coord: 275..344
e-value: 2.9E-18
score: 66.0
coord: 166..237
e-value: 1.1E-15
score: 57.7
coord: 69..148
e-value: 4.9E-14
score: 52.4
coord: 371..439
e-value: 9.1E-18
score: 64.4
IPR003029S1 domainPROSITEPS50126S1coord: 371..440
score: 19.616
IPR003029S1 domainPROSITEPS50126S1coord: 166..237
score: 19.279
IPR003029S1 domainPROSITEPS50126S1coord: 275..344
score: 20.269
IPR003029S1 domainPROSITEPS50126S1coord: 67..149
score: 14.914
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 370..439
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..148
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 154..239
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 269..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51982contigH-elongata_contig51982:302..3638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51982.12479.1mRNA_H-elongata_contig51982.12479.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51982 302..3647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51982.12479.1 ID=prot_H-elongata_contig51982.12479.1|Name=mRNA_H-elongata_contig51982.12479.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=460bp
MSPVGEHVGEVTDVLSVGQVVDVRIREVDEKLGRINMSLLPYGEGEEVKT
SPQVTKDVSHLVGSDPAEFRKGSISAVQDYGLFVNIDGVDGLLHVSKMRR
EGVFFTLPVVSDRSINSGNIHETYSEGQEVEVRILEVNVGTNKMSLSMLP
DTEDVDFSKYENMSPDEWLDGTVVSMMNYGAFVKLEEGVDGMVHISQMHP
QGERIDSVYNAVQIGDAVRVRIIETDSNARRIRLTMRDIDCVPPPSEGGG
GMGRGGGRGIKRVKSVEKFLDLSAEEWIEGTVASITNFGAFVAVDEDTDG
LLHISQIAEDHVSNVEDHLQVGQDIQVRVIEVDVDNCRLGLSMREPRQSA
PRGGGFRGKKDVSLLLGRDPNEFITGRVVSIVPYGAFVNIEGNIDGLVHI
SEMAMGRVDSAEDVVQMGQEVQVRISDVNVDNNTINLSMVPPGSYDNEGG
GGYGKQLLY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold