prot_H-elongata_contig51945.12476.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51945.12476.1
Unique Nameprot_H-elongata_contig51945.12476.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig51945.12476.1 vs. uniprot
Match: A0A6H5JCW1_9PHAE (ACPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW1_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.020e-20
Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 0 
Query:    1 QIDGVSRPDWSFQVVPLPDRYAACVARGPPSECSSTGLAAGVISDPNVGADIFLQGQSLPRMRFTEVKLYDIIPQEVASKL 81
            ++D V RPDWSF+V  LPD YAACVARGPPS CS +G  AGVISD +       +GQSLP++RF +V L +I+P E A++L
Sbjct:  422 KVDNVLRPDWSFKVFSLPDGYAACVARGPPSACSPSGQEAGVISDAHASE----RGQSLPQLRFRKVGLEEIVPPEAAARL 498
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51945.12476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCW1_9PHAE1.020e-2056.79ACPS domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51945contigH-elongata_contig51945:298..555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51945.12476.1mRNA_H-elongata_contig51945.12476.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51945 298..555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51945.12476.1 ID=prot_H-elongata_contig51945.12476.1|Name=mRNA_H-elongata_contig51945.12476.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
QIDGVSRPDWSFQVVPLPDRYAACVARGPPSECSSTGLAAGVISDPNVGA
DIFLQGQSLPRMRFTEVKLYDIIPQEVASKLHDLI*
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