prot_H-elongata_contig51902.12471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51902.12471.1
Unique Nameprot_H-elongata_contig51902.12471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5JUT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT2_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.830e-28
Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    1 KGQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISI-KPNFVTFVVAYAPTE--EATEG----QKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            +G HGVG+AIKE      G++   +ECIS RL+KAR+ I +   VTFVV YAPTE    T G     K  +  AL   +  V +R+++ +L DANARTG+R EG    ++K++GAY RD++N NG+ LL  A DN+L+L NT F
Sbjct:   48 RGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKARLQIGRTCRVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVYSRDHLVVLMDANARTGRRREGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 189          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5JVI3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.920e-26
Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 0
Query:    1 KGQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISI-KPNFVTFVVAYAPTE--EATEG----QKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            +G HGVG+AIKE      G++   +ECIS RL+K R+ I +   VTFVV YAPTE    T G     K  +  AL   +  V +R+++ +  DANARTG+R  G    ++K++GAY+RD++N NG+ LL  A DN+L+L NT F
Sbjct:  165 RGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLIVPMDANARTGRRRHGC--CDAKIMGAYERDIINNNGERLLGLASDNQLSLTNTYF 306          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5JD10_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD10_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.450e-23
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    1 KGQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISI-KPNFVTFVVAYAPTE--EATEG----QKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            +G HGVG+AIKE      G++   +ECIS RL+K  + + +   VTFVV YAP E    T G     K     AL   +  + + +Y+ +L DANARTG+R +G    ++K++GAY RD++N NG+ LL  A DN+L+L NT F
Sbjct:  538 RGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVCLQLGRTCGVTFVVGYAPAETVRTTAGGDVNAKDSSWTALDAAIREIHSCDYLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 679          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.250e-20
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EET+ K+ +     E +  RL+  R  +  +   VTFV AYAPT+ AT   K  +   L + V    A+EY+F+L DANA+TG  G   GE E + +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:  139 GTHGVGIAV-EETLCKSSQ--YTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG--GGIAGENE-RTMGEYGRNELNDNGRLLLTFATDNRLAVLNTFF 270          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.830e-20
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EET+ K+ +     E +  RL+  R  +  +   VTFV AYAPT+ AT   K  +   L + V  + A+EY+F+L DANA+TG  G   GE E   +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:  371 GTHGVGIAV-EETLCKSSQ--YTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFF 502          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.390e-20
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+KE     +       E I  RL+  R+ +  +   V FV A APTE +T   K  +   L + V  + ++E V++L DANARTG R +GG   + +V+G Y RD LN NG LLL+FA +N+L L NT F
Sbjct:  123 GVHGVGIAVKESLCKTS---TFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG---DGRVIGMYGRDELNDNGMLLLNFATENRLALTNTFF 254          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.150e-20
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EE + KA +     E +  RL+  R  +  +   V FV AYAPT+ AT   K  +   L + V  + A+EY+F+L DANA+TG  G   GE E + +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:  109 GTHGVGIAV-EEALCKASQ--YTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTG--GGIAGENE-RTMGEYGRNELNDNGRLLLTFATDNRLAVLNTFF 240          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.560e-20
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EET+ K+ +     E +  RL+  R  +  +   VTFV AYAPT+ AT   K  +   L + V    A+EY+F+L DANA+TG  G   GE E   +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:   84 GTHGVGIAV-EETLCKSSQ--YTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFF 215          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.660e-20
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EET+ K+ +     E +  RL+  R  +  +   VTFV AYAPT+ AT   K  +   L + V    A+EY+F+L DANA+TG  G   GE E   +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:  575 GTHGVGIAV-EETLCKSSQ--YTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFF 706          
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Match: A0A6H5L3X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X5_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 9.660e-20
Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    2 GQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPN--FVTFVVAYAPTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGEAESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF 137
            G HGVG+A+ EE + KA +     E +  RL+  R  +  +   V FV AYAPT+ AT   K  +   L + V  + A+E VF+L DANA+TG  G   GE E   +G Y R+ LN NG+LLL+FA DN+L +LNT F
Sbjct:  170 GTHGVGIAV-EEALCKASQ--YTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKECVFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNDNGRLLLTFATDNRLAVLNTFF 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51902.12471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JUT2_9PHAE1.830e-2846.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVI3_9PHAE3.920e-2644.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JD10_9PHAE1.450e-2342.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQZ7_9PHAE1.250e-2044.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K319_9PHAE1.830e-2044.93Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JBD7_9PHAE2.390e-2042.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K9G5_9PHAE3.150e-2044.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7U5_9PHAE4.560e-2044.93Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE4.660e-2044.93Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3X5_9PHAE9.660e-2044.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..137
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..137
e-value: 1.1E-11
score: 46.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51902contigH-elongata_contig51902:874..1284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51902.12471.1mRNA_H-elongata_contig51902.12471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51902 874..1284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51902.12471.1 ID=prot_H-elongata_contig51902.12471.1|Name=mRNA_H-elongata_contig51902.12471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
KGQHGVGLAIKEETVNKAGKDDIAIECISARLLKARISIKPNFVTFVVAY
APTEEATEGQKSKYIAALKNTVSSVSAREYVFILTDANARTGKRGEGGGE
AESKVLGAYDRDVLNGNGKLLLSFAEDNKLTLLNTRF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf