prot_H-elongata_contig51817.12459.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51817.12459.1
Unique Nameprot_H-elongata_contig51817.12459.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length332
Homology
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.390e-53
Identity = 182/334 (54.49%), Postives = 208/334 (62.28%), Query Frame = 0
Query:   15 STPIGQAVATVKEQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTE-SDAGESWLLTPTATAWEILTAGRVHIQAGLASLPVSGGAARASAGTTGFGPPAGFATGLGELAPPGVY-----AGGLGGGGMXXXXXXGPNMAAIQRMAQDPAMXXXXXXXXXXXXXXXXXXRMGAAMQAMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALQRAS-MNLGGAFGA---------AQGFPQPTPGVGQAGISPAPVPPTVAAPXXXXXXXXXXXXXXXXAGD--GDDPEEKSEDDLMAEAIRRSLED 330
            S+P+GQAVATV  QPAGVARECLTTL+KVIDNI  HP  +KYRKIKRANAGF RKVG+VPGGEA MRALGF E  DA ESWLL P+  AW +LTAGRV IQ  LA+LP +  AA AS G        GFA GLG L PPG +      GG GGGGM       P+MA + RMAQ+PA+   XXXXXXXXXXXXXXX     MQ++ +                  XXXXXXXXXX  ALQRA+ M+ GGA  A         AQGF  P                     XXXXXXXXXXXXX    G   G++ +E +ED+L+AEAIRRS+ED
Sbjct:  141 SSPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGASTG--------GFAGGLGVLPPPGAFPQAGFGGGTGGGGM-------PDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMDFGGALAAGINAAPPNAAQGFQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A7R9YC84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC84_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.830e-16
Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = 0
Query:   16 TPIGQAVATVKEQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTATAWEILTAGRVHIQAGL-ASLPVSGGAARASAGTTGFG 137
            TP   AV T+    A    E L TL KV++NI  +P   KYR +K+ NA F R++G V G  A +R LGF   D GE+W LTP+A+AWEIL+A R H+Q  + A  P +  AA A+A    FG
Sbjct:  180 TPFTHAVETLAADDAAKRPEALRTLLKVMENIQNNPLEAKYRTLKKGNAVFNRRLGGVMGAAACLRELGF--QDRGETWELTPSASAWEILSAARTHLQRVIEAESPSTQAAAAANAPGAAFG 300          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.100e-13
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   10 GGQAASTPIGQAVATVKEQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTATAWEILTAGRVHIQ 114
            G  A +T I  A+  +   P    R  L TL KVIDNI+Q+P  DKYR+++ ANA F RKVGS+PGG   +R +GFT+ +   + +L P+  AW  L + R  +Q
Sbjct:  110 GTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQ 214          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.060e-13
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   10 GGQAASTPIGQAVATVKEQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTATAWEILTAGRVHIQ 114
            G  A +T I  A+  +   P    R  L TL KVIDNI+Q+P  DKYR+++ ANA F RKVGS+PGG   +R +GFT+ +   + +L P+  AW  L + R  +Q
Sbjct:  110 GTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGEEEGTLILAPSTEAWHHLNSCRRLVQ 214          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A836CLK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-11
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 0
Query:   43 VIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDA-GESWLLTPTATAWEILTAGRVHIQAGLASL 120
            V DNI+ HP  +KYR IK++N  F  +VG+VPGG A+++ALGFT+S    ++W+L P+A AW  L  GR  +Q+ L+SL
Sbjct:  201 VADNIINHPLEEKYRSIKKSNKSFAARVGNVPGGAAAIQALGFTDSPTVPDTWVLLPSADAWPTLRQGRDLLQSTLSSL 279          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A7S2EXK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXK5_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 3.870e-10
Identity = 58/155 (37.42%), Postives = 82/155 (52.90%), Query Frame = 0
Query:   14 ASTPIGQAVATVKEQ--PAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFT-----ESDAGES-WLLTPTATAWEILTAGRVHIQAGLASLPVSGGAARASAGTTGFGPPAGFATGLGELAPPGVYAGGLG 160
            AS P+  A+ T++ +  PA   +  L TL K++ N+  HP  +KYR++K+ NA F+R++G +PGG  +M A GFT       DA E  + LTP+A AW  L A +  +   LA    +   A A        PP G A      A PG+ AGGLG
Sbjct:  173 ASDPLPAALGTIRSRCTPAQY-KTALQTLDKLLGNVKSHPMEEKYRRVKKGNAAFQRRLGGLPGGHDAMLAAGFTVEQECSGDACEEIYSLTPSADAWPKLVAAKDAVATALAEAERAQQQAAA--------PPVGAAP-----AFPGMGAGGLG 313          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: B8C198_THAPS (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C198_THAPS)

HSP 1 Score: 70.9 bits (172), Expect = 6.450e-10
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   15 STPIGQAVATVK-EQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAG--ESWLLTPTATAWEILTAGRVHIQ 114
            S+P+  A+ T++    +   R  L T  K++ NI+ HP  +KYR IK++N  F +++G V GGEA + A GF     G  ES++L P+A AW  L A    IQ
Sbjct:  126 SSPLASAMLTLRTNNNSETYRTALATADKLLSNIISHPMEEKYRSIKKSNPAFHKRLGGVSGGEALLLASGFVVESGGGVESYVLRPSADAWPRLVAAGEEIQ 228          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.330e-9
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    7 PPLGGQAASTPIGQAVATVKE-QPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGF-TESDAGES---WLLTPTATAWEILTAGRVHIQAGLA 118
            PP GG  AS P+G A+  ++   P  V    + TL KV+ NIV HP  +KYR++K+ N  FR+++G + GG   M A GF  E D GE+   + L  TA +W  L   +  ++  +A
Sbjct:  139 PPSGG--ASDPLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVA 253          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A7S3VBJ8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBJ8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.620e-8
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
Query:   37 LTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTATAWEILTAGRVHI 113
            +TTL K++ NIV  PQ +KYRK+KRANA F++++G + G    M  LGF+ +D  E ++L P+  AW  L  G+  +
Sbjct:   46 ITTLQKILGNIVTKPQEEKYRKVKRANAAFQKRLGRLNGAHDVMTMLGFSVNDQNE-YVLVPSPEAWPKLVEGKKEV 121          
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Match: A0A485L3W8_9STRA (Aste57867_15783 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3W8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.080e-8
Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 0
Query:    4 PRLPPLGGQAASTPIG----QAVATVKEQPAGVARECLTTLSKVIDNIVQHPQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTATAWEILTAGR 110
            P   P+GG A ST       Q +  ++  P G A   + TL+K+ +NIV HP  +KYRKI+ AN   +RKV  VP G  S+ A+GF         +L P A  WE L A +
Sbjct:   88 PSAVPVGGAAPSTXXXXXXIQLLPLLRASPGGPA--AIATLTKMAENIVNHPTEEKYRKIRLANEALKRKVLDVPHGTPSVLAMGFAAGVEDGHLVLVPNAANWEHLVASK 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51817.12459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LAX4_ECTSI2.390e-5354.49Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7R9YC84_9STRA2.830e-1645.53Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2SMK3_9STRA1.100e-1342.86Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SNT8_9STRA5.060e-1342.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CLK8_9STRA1.030e-1149.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EXK5_TRICV3.870e-1037.42Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8C198_THAPS6.450e-1038.83Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
A0A448ZQX1_9STRA1.330e-937.61Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A7S3VBJ8_9STRA1.620e-842.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A485L3W8_9STRA3.080e-838.74Aste57867_15783 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 35..98
e-value: 1.3E-8
score: 44.6
IPR018997PUB domainPFAMPF09409PUBcoord: 34..99
e-value: 9.3E-17
score: 60.8
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 193..237
e-value: 0.0019
score: 27.5
NoneNo IPR availableGENE3D1.10.260.100coord: 173..228
e-value: 4.3E-5
score: 25.5
NoneNo IPR availableGENE3D1.20.58.2190coord: 18..114
e-value: 1.2E-19
score: 71.7
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 31..115
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 22..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51817contigH-elongata_contig51817:685..2177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51817.12459.1mRNA_H-elongata_contig51817.12459.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51817 478..2380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51817.12459.1 ID=prot_H-elongata_contig51817.12459.1|Name=mRNA_H-elongata_contig51817.12459.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
MAIPRLPPLGGQAASTPIGQAVATVKEQPAGVARECLTTLSKVIDNIVQH
PQVDKYRKIKRANAGFRRKVGSVPGGEASMRALGFTESDAGESWLLTPTA
TAWEILTAGRVHIQAGLASLPVSGGAARASAGTTGFGPPAGFATGLGELA
PPGVYAGGLGGGGMGMGAGGGPNMAAIQRMAQDPAMMQSMMNDPTVRAMM
GNNPRMGAAMQAMASNPALMSQAFNMMQSNPAMMQQAQRMLQDPAALQRA
SMNLGGAFGAAQGFPQPTPGVGQAGISPAPVPPTVAAPPPAPPAPVTAPT
TPAPAGDGDDPEEKSEDDLMAEAIRRSLEDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR006636STI1_HS-bd
IPR036339PUB-like_dom_sf