prot_H-elongata_contig5178.12452.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5178.12452.1 vs. uniprot
Match: A0A6H5LNC5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNC5_9PHAE) HSP 1 Score: 222 bits (565), Expect = 7.900e-58 Identity = 158/338 (46.75%), Postives = 194/338 (57.40%), Query Frame = 0
Query: 4 EDWESDSEDGAAGVKYAAVGQTAASPRSPSASKEMMHRARVEAREAVDIGEEEAFRAWLAKLRAVQEIPIGHVEKCSRALAVTLGTSPADGSVRSSLQALLVAETLRGGGSEEVARFVRSVAGIIADAASRACPLEMQPPPPRDPRAVASPSSAGAGKTVRDCGGVVGDGPCGDPSERDDKSCVGGTSCAKA-SLDPSVIAIRDMEGVAAYAHALAHVARSASKQRRAWKKQASHVTAGVVLQN----------NNQRGKKGKRGATLTSGHTKI--KAHVHGLPSSPSKLRPPPVVVGNLPGSFPFSRSTDSLLMHARAMVGLKRAHRWAKAWLALP 328
E W+ D AA A +AA P P + + + RARV A EAVD+GE+ AFR WL +LR +Q+IP+GHVEKCSR+LAV LGTSP DGSVR+S++ALLVAETLRGG S EVA FVRS+AG++ADAAS+A P + P V PS + R G D C D + D K CA + DP+ ++IRD EG AAYAHAL ++ARS ++++GKK K+ A H + A V LPSS PPP VVGNL G +PFSRS DSLLMHA+ MVGLKRAHRW AWL P
Sbjct: 1142 ETWQGDGS--AARSPVGAASASAAIPTKPPRAPKEVRRARVYAGEAVDLGEDAAFRKWLGRLRVIQDIPVGHVEKCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASPPKSAASTPTVGNPVI-PSGGDSHDNARFSPGK--DQVCVDTLDLDAKK----RHCAVGDNTDPAAVSIRDKEGAAAYAHALTYLARSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKKGKKTKKAAWAMRRHLEAVETAQVVVLPSS---QEPPPAVVGNLLGGYPFSRSGDSLLMHAKTMVGLKRAHRWVTAWLNAP 1467
BLAST of mRNA_H-elongata_contig5178.12452.1 vs. uniprot
Match: D7G7M9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M9_ECTSI) HSP 1 Score: 152 bits (383), Expect = 9.200e-35 Identity = 100/198 (50.51%), Postives = 127/198 (64.14%), Query Frame = 0
Query: 22 VGQTAAS---PRSPSASKEMMHRARVEAREAVDIGEEEAFRAWLAKLRAVQEIPIGHVEKCSRALAVTLGTSPADGSVRSSLQALLVAETLRGGGSEEVARFVRSVAGIIADAASRACPLEMQPPPPRDPRAVASPSSAGAGKTVRDCGGVVG-DGPCGDPSERDDKSCVGGTSCAKASLDPSVIAIRDMEGVAAYAH 215
VG +AS P P + + RARV+A EAVD+GE+ AFR WL +LRA+Q+IP+GHVEKCS +LAV LGTSP DGSVR+S++ALLVAETLRGG S EVA FVRS+AG++ADAAS+A P + P V +P G + + G D C D + D K G + DP+ ++IRD EG AAYAH
Sbjct: 654 VGAASASAEIPTKPPRALREVRRARVDAGEAVDLGEDAAFRKWLGRLRAIQDIPVGHVEKCSGSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASPSKSAASTPT----VGNPVIPSGGDSHDNAQFSPGKDEVCVDTLDLDAKK---GHCAVGDNTDPAAVSIRDKEGAAAYAH 844 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5178.12452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig5178.12452.1 ID=prot_H-elongata_contig5178.12452.1|Name=mRNA_H-elongata_contig5178.12452.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=640bpback to top |