prot_H-elongata_contig51651.12439.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51651.12439.1
Unique Nameprot_H-elongata_contig51651.12439.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 8.780e-86
Identity = 147/166 (88.55%), Postives = 154/166 (92.77%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSGPMYDAQPTTLPQEPSVVPESTGPTGVDEFGLPVGPTPDRPAAVRL 166
            METLKRKKMYE QRDQMAGQQFNIEQT FAIDS+KDTATTVAAMKDASKTLKADIKKIDI +VEDMTDDMAXXXXXXNEIND+MGRSYNVGDE+DEDDLDAELACLDDELDALEGLEED+GP Y AQP +LPQEPS+VPESTGPTGVDEFGLPV P P RPA  R 
Sbjct:  139 METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSYNVGDELDEDDLDAELACLDDELDALEGLEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEFGLPVNPAPARPAQERF 304          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.070e-50
Identity = 100/164 (60.98%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSGPMYDAQPTTLPQEPSVVPESTGPT--------GVDEFGLPVGP 156
            M+TLKRKKMYEQQRDQMAGQ FNIEQTSFAIDS+KDT TTVAAMK A+ TLKA+ KK++I  +ED  DD+       NEIN++MGRSY V DEMDE+DLDAELACLDDEL+ +E  EE         P  LP EPS  P    P+        G+D+FGLPV P
Sbjct:   65 MDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSYGVPDEMDEEDLDAELACLDDELEGIEAGEEAEASYLG--PAGLPVEPSAEPAGANPSAALPADGGGMDDFGLPVAP 226          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.170e-49
Identity = 106/163 (65.03%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSGPMYDAQPTTLPQEPSVVPESTGPT-------GVDEFGLPVGP 156
            METLKRKKMYEQQRDQMAGQ FNIEQTSFAIDS+KDT TTVAAMKDA+KTLKA+ KK++I Q+ED      XXXXXX  IND+MGR+Y + DE+DE DLDAELACL+DEL+ LE  E ++ P Y  QP  +P EPS VP             GVD FGLPV P
Sbjct:   91 METLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAYGMPDEVDEADLDAELACLEDELEGLEEGETEAAPSY-LQPAGMPVEPSAVPAGAPAADAAAEADGVDAFGLPVAP 252          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: F0Y671_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y671_AURAN)

HSP 1 Score: 155 bits (391), Expect = 1.210e-44
Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSGPMY--DAQPTTLPQEPSVVP 139
            M  LKRKKMYE QRDQ+AGQ FN+EQTSFAIDSVKDT TTV AMK ASKTLK + KK+DI Q+ED+ DD+A      NE+ D +GRSY +GD++DE DLDAELACLDDEL   E   EDS P Y   A P  LP++P+ +P
Sbjct:   65 MAVLKRKKMYEAQRDQLAGQAFNVEQTSFAIDSVKDTLTTVDAMKAASKTLKTEFKKVDIDQIEDVQDDLADMMEDMNEVQDALGRSYGIGDDVDEADLDAELACLDDELGMDELGLEDSTPAYLQPADPGALPEQPTNLP 205          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.150e-41
Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDA-LEGLEEDSGPMY--DAQPTTLPQEPSV---VPESTGPTGVDEFGLPV 154
            M  LKRKKMYEQQRDQ+AGQ FNIEQT+F IDSVKDT TTV AMK ASKTLK + KK++I +++D+ D   XXXXXXNE+ DV+GRSY+VG+++DE DLDAEL  L D+LDA LE  + DS P Y   A+PT LP+        PES     VDEFGLPV
Sbjct:   74 MGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSYDVGEDIDEADLDAELEALGDDLDAELELDDADSTPAYLQPAEPTNLPEXXXXXXXAPESA----VDEFGLPV 229          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA)

HSP 1 Score: 145 bits (367), Expect = 7.170e-41
Identity = 86/154 (55.84%), Postives = 113/154 (73.38%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSGPMYDAQPTTLPQEPSVVPESTGPTGVDEFGLPV 154
            M  L+RK+MYEQQRDQ+AGQ FN+EQT+FAIDSVKDT TTV AMK ASKTLK ++KK+D+ Q+ED+ DD+AXXXXXX  + DV+G+SY +GD++D+ DLDAEL  L D+ D +   +     +  A P+ +P +P+  P       VDEFGLPV
Sbjct:   65 MGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSYGIGDDIDDADLDAELDALGDDFDDVADADATPAYLQPADPSLMPDQPTDAPVQAD--DVDEFGLPV 216          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI)

HSP 1 Score: 142 bits (357), Expect = 3.040e-39
Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEEDSG---PMYDAQPTTLPQEPSV--------VPESTGPTGVDEFGLPV 154
            +E LKRKKMYEQQRDQ+ GQ FN++Q +FA++++KDT TTVAAMKDA+K LK +  KID+ ++ED+ DD+A      NEI++ +GRSY   D +DEDDL+AELACL DE D  E L E+     P Y   P+ +P  P+          P++  P+GVDEFGLPV
Sbjct:   65 VEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTTVAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSYGTPDYIDEDDLEAELACLGDEFD--EELTEEVSLEQPSY-LSPSGMPHVPAAGLPVPTIAQPQAPQPSGVDEFGLPV 226          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 6.100e-39
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELAC 105
            METLKRKKMYE QRDQ+AGQQFNIEQT+F IDS+KDT TTV AMK A+K +K++ KK++I ++ED  DD+AXXXXX NEIND+MGRSYNVGDE+DE DLDAELAC
Sbjct:   65 METLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSYNVGDEIDEADLDAELAC 169          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: W4HCB2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCB2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 8.140e-35
Identity = 78/157 (49.68%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLE-EDSGPMYDAQPTTLPQEPSVVPESTGPTGVDEFGLPVGP 156
            ++TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+  TV+AMK A+  LKA+ KK +  ++E++ DDMA      NEI +++GRSY VG ++DE +L+AEL  L+DE    E +  + + P Y A  T LP  P+ V ++    GVDE+GLP+ P
Sbjct:   65 LQTLKRKKMYEQQRDSMAAQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMDDMNEIQEILGRSYGVGQDIDESELEAELEGLEDEWAMEEAVAPQHAAPSYLA--TDLPAAPTGVKDTPTAAGVDEYGLPLAP 219          
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.630e-34
Identity = 79/157 (50.32%), Postives = 105/157 (66.88%), Query Frame = 0
Query:    1 METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKTLKADIKKIDIGQVEDMTDDMAXXXXXXNEINDVMGRSYNVGDEMDEDDLDAELACLDDELDALEGLEE-DSGPMYDAQPTTLPQEPSVVPESTGPTGVDEFGLPVGP 156
            ++TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+  TV+AMK A+  LKA+ KK +  ++E++ DDMA      NEI +++GRSY +G ++DE +L+AEL  L+DE    E +    S P Y A  T LP  PS   +    TGVDE+GLP+ P
Sbjct:   65 LQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMEDMNEIQEILGRSYGLGQDVDESELEAELEGLEDEWAMEEAIAPATSAPAYLA--TDLPAAPSGQKDKPQATGVDEYGLPMAP 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51651.12439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ1_ECTSI8.780e-8688.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2AMY1_9STRA2.070e-5060.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2FVB6_9STRA5.170e-4965.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y671_AURAN1.210e-4463.12Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3K2P3_9STRA5.150e-4161.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4EE62_9STRA7.170e-4155.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812Y1R2_SYMMI3.040e-3951.52CHMP5 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A835ZMU4_9STRA6.100e-3975.24Snf7 family n=1 Tax=Tribonema minus TaxID=303371 R... [more]
W4HCB2_9STRA8.140e-3549.68Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485L0R2_9STRA1.630e-3450.32Aste57867_14479 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableCOILSCoilCoilcoord: 96..116
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR22761:SF12CHARGED MULTIVESICULAR BODY PROTEIN 5coord: 1..134
IPR005024Snf7 familyPFAMPF03357Snf7coord: 3..136
e-value: 2.3E-34
score: 118.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51651contigH-elongata_contig51651:1570..3127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51651.12439.1mRNA_H-elongata_contig51651.12439.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51651 1456..3917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51651.12439.1 ID=prot_H-elongata_contig51651.12439.1|Name=mRNA_H-elongata_contig51651.12439.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
METLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSVKDTATTVAAMKDASKT
LKADIKKIDIGQVEDMTDDMADMMEDMNEINDVMGRSYNVGDEMDEDDLD
AELACLDDELDALEGLEEDSGPMYDAQPTTLPQEPSVVPESTGPTGVDEF
GLPVGPTPDRPAAVRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam