prot_H-elongata_contig51607.12432.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51607.12432.1
Unique Nameprot_H-elongata_contig51607.12432.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
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BLAST of mRNA_H-elongata_contig51607.12432.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 6.750e-37
Identity = 79/167 (47.31%), Postives = 105/167 (62.87%), Query Frame = 0 
Query:    1 RPNPLYRQVVLVNLESAANGVGRYFQPEKPCEEGLSAASRELDSRQRAQLGPLVDLILSPSLDEENAEAVGSFLDRSQEQF-GTGATLALALLDMGWSMPAPIRPKLSDWVFVAVYEALRRYGLFTRYGALNPPDARLPIVEMEPQRFDPSMLESPIFKALEFGSSA 166
            R NP+YRQ+V++ ++S A G  RY  P    E   S   R L+   +A +G L+D +LSP+ DEENAEA+   LDR +EQ  G GATLAL  LD  W +PAPIRP +     +AVYEALRR+G+FTR+G +  PD  L   E  P+  +  M +SPIFKA +F + A
Sbjct:   75 RVNPVYRQMVVLAVKSGAAGAARYLNPSG--ESSTSTGKRALNKAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVE-GMEDSPIFKAAQFETDA 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51607.12432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH58_ECTSI6.750e-3747.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51607contigH-elongata_contig51607:2687..3817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51607.12432.1mRNA_H-elongata_contig51607.12432.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51607 2687..3817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51607.12432.1 ID=prot_H-elongata_contig51607.12432.1|Name=mRNA_H-elongata_contig51607.12432.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
RPNPLYRQVVLVNLESAANGVGRYFQPEKPCEEGLSAASRELDSRQRAQL
GPLVDLILSPSLDEENAEAVGSFLDRSQEQFGTGATLALALLDMGWSMPA
PIRPKLSDWVFVAVYEALRRYGLFTRYGALNPPDARLPIVEMEPQRFDPS
MLESPIFKALEFGSSA
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