prot_H-elongata_contig51553.12422.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51553.12422.1
Unique Nameprot_H-elongata_contig51553.12422.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A6H5KZY7_9PHAE (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY7_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 9.090e-37
Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIF-DNENKIRRHTVVFRTG 100
            +E+ILLDY E SV+TTY+Q++ +KTVFKG+EG RT+F G+FE LSD SDLAAP+ DV E+  ++F+ W+CPASGF+DATDTF   D   KI R  V ++TG
Sbjct:   75 MERILLDYDEDSVVTTYDQTADKKTVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 175          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: D7G623_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G623_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 5.470e-35
Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIF-DNENKIRRHTVVFRTG 100
            +++ILLDY E SV+TTY+Q++   +VFKG+EG RT+F G+FE LSD SDLAAP+ DV E+  ++F+ W+CPASGF+DATDTF   D   KI R  V ++TG
Sbjct:   24 MDRILLDYDEDSVVTTYDQTADRISVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 124          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A812KSN4_9DINO (CasB protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KSN4_9DINO)

HSP 1 Score: 100 bits (248), Expect = 1.420e-24
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVVFRTG 100
            ++KI+LDY ++S+   YN     K+ F G   +R MFT +F  LS++  L AP+ DVDE GK +F+ W+CP  G+  ATDTF+F  +NKI+R  +V   G
Sbjct:   54 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNKIKRQNIVVTKG 153          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A812STE6_9DINO (CasB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812STE6_9DINO)

HSP 1 Score: 100 bits (250), Expect = 2.270e-24
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVVFRTG 100
            ++KI+LDY ++SV   YN     K+ F G   +R MFT +F  LS++  L AP+ DVDE GK +F+ W+CP SG+   TDTF+F  +NKI+R  +V   G
Sbjct:  100 LDKIMLDYDDTSVAKVYNNKDGSKSEFVGRVQIRNMFTNLFSDLSNLDTLKAPVVDVDEAGKTVFLVWECPGSGYHFGTDTFVFGPDNKIKRQNIVVTKG 199          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A812Z7R4_9DINO (CasB protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z7R4_9DINO)

HSP 1 Score: 100 bits (248), Expect = 4.040e-24
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVVFRTG 100
            ++KI+LDY ++S+   YN     K+ F G   +R MFT +F  LS++  L AP+ DVDE GK +F+ W+CP  G+  ATDTF+F  +NKI+R  +V   G
Sbjct:   97 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLETLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNKIKRQNIVVTKG 196          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A813B714_SYMMI (CasB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B714_SYMMI)

HSP 1 Score: 98.6 bits (244), Expect = 3.640e-22
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVV 96
            ++KI+LDY ++S+   YN     K+ F G   +R MFT +F  LS++  L AP+ DVDE GK +F+ W+CP  G+  ATDTF+F  +NKI+R  +V
Sbjct:  107 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNKIKRQNIV 202          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A1Q9EQB8_SYMMI (Metacaspase-1B n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EQB8_SYMMI)

HSP 1 Score: 98.6 bits (244), Expect = 6.930e-22
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVV 96
            ++KI+LDY ++S+   YN     K+ F G   +R MFT +F  LS++  L AP+ DVDE GK +F+ W+CP  G+  ATDTF+F  +NKI+R  +V
Sbjct:   97 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNKIKRQNIV 192          
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Match: A0A8J2SYK6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYK6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.980e-20
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0
Query:    1 VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDLAAPITDVDEDG-KIIFITWKCPASGFMDATDTFIFDNENKIRRHTV 95
            V K+LLDY E S I  YN     +TV+ G+ G    FTG+F  L D+S LAAP   V+E   K +F+ W+CP+SGF+  TDTF+F++  KI R TV
Sbjct:   21 VSKVLLDYCEESKIIVYNWHDDTETVYNGMAGACECFTGLFAALPDLSGLAAPEIHVEEGNPKSVFLIWRCPSSGFVHCTDTFLFNDAGKIVRQTV 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51553.12422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KZY7_9PHAE9.090e-3759.41SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
D7G623_ECTSI5.470e-3556.44SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A812KSN4_9DINO1.420e-2444.00CasB protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812STE6_9DINO2.270e-2445.00CasB protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A812Z7R4_9DINO4.040e-2444.00CasB protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A813B714_SYMMI3.640e-2244.79CasB protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A1Q9EQB8_SYMMI6.930e-2244.79Metacaspase-1B n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8J2SYK6_9STRA2.980e-2047.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 1..98
e-value: 1.1E-5
score: 27.4
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 24..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51553contigH-elongata_contig51553:1429..2353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51553.12422.1mRNA_H-elongata_contig51553.12422.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51553 1429..2353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51553.12422.1 ID=prot_H-elongata_contig51553.12422.1|Name=mRNA_H-elongata_contig51553.12422.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
VEKILLDYSESSVITTYNQSSTEKTVFKGLEGVRTMFTGIFETLSDMSDL
AAPITDVDEDGKIIFITWKCPASGFMDATDTFIFDNENKIRRHTVVFRTG
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf