prot_H-elongata_contig51420.12405.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51420.12405.1
Unique Nameprot_H-elongata_contig51420.12405.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 5.510e-29
Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    3 LMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLL 98
            L+T+SR++AGAL PS+ACC+LSKCYATRYFLHHSWL+LVVS EPAH LHTY G++ LL G +HG+ H+AR V +       + S+  SG ++LVLL
Sbjct:   62 LLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLALVVSFEPAHELHTYFGSLTLLFGVLHGLAHLAREVNEGHWNCFAS-SMGRSGFIALVLL 156          
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.050e-28
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MGLMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLLL 99
            M L+T++RLTAGALFPS+  CVL+KCYATRY LHHSWL+L++  EP+H LHTY G +ILLC  VH   H+A      R+       +  SG+V+++LLL
Sbjct:  260 MALITVARLTAGALFPSIIFCVLAKCYATRYLLHHSWLTLIIDFEPSHKLHTYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLL 358          
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 6.980e-28
Identity = 57/96 (59.38%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    3 LMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLL 98
            L+T+SR++AGAL PS+ACC+LSKCYATRYFLHHSWL++VVS EPAH LHT+ G++ LL G +HG+ H+AR V +E +       +  SG V+LVLL
Sbjct:  271 LLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLAVVVSFEPAHELHTFFGSLTLLFGVLHGLAHLAREV-NEGNWNFFASPMGRSGFVALVLL 365          
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.030e-27
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MGLMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLLL 99
            M L++++RLTAGALFPS+  CVLSKCYATRY LHHSWL+ ++  EP+H LHTY G +ILLC  VH V H+A      R+       +  SGLV+++LLL
Sbjct:  280 MALISVARLTAGALFPSIFFCVLSKCYATRYLLHHSWLTFIIDFEPSHKLHTYFGVLILLCSVVHSVCHIAVGALQRRADHAFKDEINRSGLVAVLLLL 378          
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: D7G8D1_ECTSI (Putative respiratory burst oxidase homolog protein C-ter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D1_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 3.030e-24
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0
Query:    1 MGLMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLLL 99
            M LM+++RLTAGAL PS+  C++SKCYATRY LH+SWL+ +V  EP+HT H Y G + +LC  +H   HV   +   R    +   +  SGLV+ +L+L
Sbjct:    1 MALMSVARLTAGALIPSITVCIVSKCYATRYVLHYSWLAHIVDFEPSHTPHKYFGILAMLCSAIHSACHVVIGILQRRPHHVVKDEMNLSGLVAFLLVL 99          
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.280e-19
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    3 LMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTLHTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLLL 99
            ++T SR  AG L+ SL+  V+SKCYA+R +LHHSWL  V+  EPAH LHTY G + L+ G  HGV H+AR+ Y +   +        SG+ +++LLL
Sbjct:  165 MLTGSRFLAGLLYASLSVSVVSKCYASRAYLHHSWLGTVLDFEPAHDLHTYFGFLTLVAGWAHGVLHLARVSYADEKFLMYETHAFRSGIFAILLLL 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51420.12405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8C4_ECTSI5.510e-2960.42Putative respiratory burst oxidase homolog n=1 Tax... [more]
A0A6H5JHI2_9PHAE4.050e-2853.54FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A6H5JEC1_9PHAE6.980e-2859.38FAD_binding_8 domain-containing protein n=1 Tax=Ec... [more]
D7G8C8_ECTSI1.030e-2754.55Putative respiratory burst oxidase protein n=1 Tax... [more]
D7G8D1_ECTSI3.030e-2446.46Putative respiratory burst oxidase homolog protein... [more]
D8LF83_ECTSI1.280e-1946.39Putative respiratory burst oxidase homolog protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.552
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51420contigH-elongata_contig51420:1980..2580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51420.12405.1mRNA_H-elongata_contig51420.12405.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51420 1980..3464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51420.12405.1 ID=prot_H-elongata_contig51420.12405.1|Name=mRNA_H-elongata_contig51420.12405.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MGLMTISRLTAGALFPSLACCVLSKCYATRYFLHHSWLSLVVSVEPAHTL
HTYSGTVILLCGCVHGVTHVARMVYDERSKIELNMSVTHSGLVSLVLLL
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