prot_H-elongata_contig51396.12402.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51396.12402.1
Unique Nameprot_H-elongata_contig51396.12402.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: D7G3C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C7_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.180e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA VEQKLGEIDRAR V T+GSQFADPRRA  +WQ
Sbjct:  121 MCLSFAAVEQKLGEIDRARAVWTYGSQFADPRRAEPYWQ 159          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A836CMJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ5_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.070e-11
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFW 38
            +C++FA++EQ LGEIDRAR VL HGSQFADPRR  S+W
Sbjct:   18 ICMQFARLEQALGEIDRARAVLAHGSQFADPRRHDSYW 55          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: K8YQA2_NANGC (Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC)

HSP 1 Score: 61.6 bits (148), Expect = 5.180e-10
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC++FA++E+KLGEIDRAR V THG+ FADPRR   +W+
Sbjct:  768 MCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGYWK 806          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A1Y2GLH5_9FUNG (Pre-mRNA splicing factor Syf-1 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLH5_9FUNG)

HSP 1 Score: 61.6 bits (148), Expect = 5.180e-10
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA++E+KLGEIDRAR +  HGSQF+DPR AS +WQ
Sbjct:  750 MCMRFAEMERKLGEIDRARGIFAHGSQFSDPRIASDYWQ 788          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A7S3XMF3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMF3_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 7.290e-10
Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC++FA +E+KLGE+DRAR + THGSQFADPR+   +W+
Sbjct:   29 MCLQFADLEKKLGEVDRARALFTHGSQFADPRKDPGYWK 67          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A0N1NXS9_9EURO (Pre-mRNA-splicing factor syf1 n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1NXS9_9EURO)

HSP 1 Score: 60.5 bits (145), Expect = 1.320e-9
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MCV+FA++E++LGE+DRAR +  HGSQFADPR   SFW+
Sbjct:  671 MCVKFAEMERRLGEVDRARAIYAHGSQFADPRVDMSFWR 709          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A6A6GME1_9PEZI (Uncharacterized protein n=2 Tax=Elsinoe TaxID=40996 RepID=A0A6A6GME1_9PEZI)

HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9
Identity = 23/39 (58.97%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA++E++LGE+DRAR +  HGSQFADPRR +++W+
Sbjct:  700 MCLRFAEMERRLGEVDRARAIYGHGSQFADPRREAAYWK 738          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A2P7YGJ9_9PEZI (Uncharacterized protein n=3 Tax=Elsinoaceae TaxID=40995 RepID=A0A2P7YGJ9_9PEZI)

HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9
Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA++E++LGEIDRAR +  HGSQFADPRR + +W+
Sbjct:  700 MCLRFAEMERRLGEIDRARAIYGHGSQFADPRREAQYWK 738          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: A0A2N5W1G2_9BASI (Uncharacterized protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5W1G2_9BASI)

HSP 1 Score: 59.7 bits (143), Expect = 2.470e-9
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA +EQKLGEIDRAR +  H SQF DPR A  FW+
Sbjct:  916 MCLRFASLEQKLGEIDRARAIYAHSSQFCDPRTAPQFWE 954          
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Match: F4RFN6_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RFN6_MELLP)

HSP 1 Score: 59.7 bits (143), Expect = 2.470e-9
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ 39
            MC+ FA +EQKLGEIDRAR +  H SQF DPR A  FW+
Sbjct:  884 MCLRFASLEQKLGEIDRARAIYAHASQFCDPRTAPEFWE 922          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51396.12402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C7_ECTSI1.180e-1176.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMJ5_9STRA7.070e-1171.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YQA2_NANGC5.180e-1064.10Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidac... [more]
A0A1Y2GLH5_9FUNG5.180e-1066.67Pre-mRNA splicing factor Syf-1 n=1 Tax=Lobosporang... [more]
A0A7S3XMF3_HETAK7.290e-1061.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0N1NXS9_9EURO1.320e-964.10Pre-mRNA-splicing factor syf1 n=1 Tax=Phialophora ... [more]
A0A6A6GME1_9PEZI1.810e-958.97Uncharacterized protein n=2 Tax=Elsinoe TaxID=4099... [more]
A0A2P7YGJ9_9PEZI1.810e-961.54Uncharacterized protein n=3 Tax=Elsinoaceae TaxID=... [more]
A0A2N5W1G2_9BASI2.470e-964.10Uncharacterized protein n=2 Tax=Puccinia coronata ... [more]
F4RFN6_MELLP2.470e-964.10Uncharacterized protein n=1 Tax=Melampsora larici-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..39
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51396contigH-elongata_contig51396:3242..3358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51396.12402.1mRNA_H-elongata_contig51396.12402.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51396 3242..3361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51396.12402.1 ID=prot_H-elongata_contig51396.12402.1|Name=mRNA_H-elongata_contig51396.12402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
MCVEFAKVEQKLGEIDRARLVLTHGSQFADPRRASSFWQ
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