prot_H-elongata_contig51341.12393.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51341.12393.1
Unique Nameprot_H-elongata_contig51341.12393.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
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BLAST of mRNA_H-elongata_contig51341.12393.1 vs. uniprot
Match: D8LLG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG7_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.380e-9
Identity = 52/138 (37.68%), Postives = 79/138 (57.25%), Query Frame = 0 
Query:    2 QNLAKAENEKHEAALAKEEHRRLFAEHKSNQALLRDASKLKLLEERRERAHQIMENERRREKERREKQIDDDKTLAACKEKLRQEQEVQLKKRKEIAESLRLMQRENVAKLAEKKHQKVLEAEKDRRLMQEYRERLDR 139
            Q LA++E E+ EA   +E+ RR   EH++ Q  L+++S+ K LEE+  RA QI+ NERRRE+ER+ +++++ + L  CK KL                                + QK+ +AE+D+RLM+EYRERLDR
Sbjct:   63 QKLARSEKERREADARREQQRRALVEHQALQEELKESSRRKTLEEKCVRATQILGNERRRERERQNRKVEEARILEDCKRKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQKIADAEEDKRLMKEYRERLDR 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51341.12393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLG7_ECTSI2.380e-937.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..27
NoneNo IPR availableCOILSCoilCoilcoord: 41..72
NoneNo IPR availableCOILSCoilCoilcoord: 123..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51341contigH-elongata_contig51341:399..1547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51341.12393.1mRNA_H-elongata_contig51341.12393.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51341 399..1547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51341.12393.1 ID=prot_H-elongata_contig51341.12393.1|Name=mRNA_H-elongata_contig51341.12393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
RQNLAKAENEKHEAALAKEEHRRLFAEHKSNQALLRDASKLKLLEERRER
AHQIMENERRREKERREKQIDDDKTLAACKEKLRQEQEVQLKKRKEIAES
LRLMQRENVAKLAEKKHQKVLEAEKDRRLMQEYRERLDR*
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