prot_H-elongata_contig5128.12385.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5128.12385.1
Unique Nameprot_H-elongata_contig5128.12385.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length296
Homology
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BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.660e-7
Identity = 33/43 (76.74%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQ 43
            QGKY DAEPL ERSQTIRE  LG EHPDVAQSL+ RAG L  Q
Sbjct:  498 QGKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.640e-7
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQ 43
            QGKY +AEPLYERSQ I+E  LG EHPDVA SL+ R   L  Q
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 9.950e-6
Identity = 29/37 (78.38%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:    2 GKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAG 38
            GKYADAEPL ERS  IRE  LG EHPDVAQSL+ RAG
Sbjct:  404 GKYADAEPLCERSPAIREKVLGPEHPDVAQSLNNRAG 440
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BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.190e-5
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQ 43
            QGKY +AEPLYERSQ IRE  LG EHP VA SL+ RA  L +Q
Sbjct:   14 QGKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCKQ 56
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.530e-5
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQ 43
            QGKYA+AEPLYER Q I E ALG EHP+VA +L+ RAG L  Q
Sbjct:   30 QGKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQ 72
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.560e-5
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQ 43
            QGKYA+AEPLYERSQ I+E  LG EHPDV  SL+ RA  L +Q
Sbjct:  660 QGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.870e-5
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYR 36
            QGKY DAE LYERS  IRE  LG EHPDVAQSL+ R
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNNR 51
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 6.990e-5
Identity = 28/40 (70.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFL 40
            QGKYA+AEPLYERS  I+E  LG EHPDVA SL  RA  L
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732
[Close]
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 7.360e-5
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFL 40
            QGK+A+AEPLYERSQ IRE  LG +HPDVA+ L+ RA  L
Sbjct:  366 QGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLL 405
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5128.12385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KIY6_9PHAE1.660e-776.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K8_9PHAE2.640e-765.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLW6_9PHAE9.950e-678.38NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMK1_9PHAE1.190e-567.44Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5K5H9_9PHAE1.530e-567.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXS7_9PHAE2.560e-567.44NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8Z8_9PHAE2.870e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI6.990e-570.00NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L226_9PHAE7.360e-567.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 30..63
e-value: 120.0
score: 5.5
coord: 241..274
e-value: 57.0
score: 8.3
coord: 114..147
e-value: 98.0
score: 6.2
coord: 72..105
e-value: 230.0
score: 3.0
coord: 156..189
e-value: 21.0
score: 12.1
coord: 198..232
e-value: 200.0
score: 3.6
NoneNo IPR availablePFAMPF13374TPR_10coord: 114..154
e-value: 0.0053
score: 16.6
NoneNo IPR availablePFAMPF13424TPR_12coord: 28..104
e-value: 8.9E-17
score: 61.2
coord: 165..230
e-value: 7.5E-16
score: 58.2
coord: 239..295
e-value: 3.5E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..96
coord: 145..295
coord: 87..184
coord: 56..139
NoneNo IPR availablePANTHERPTHR45783:SF5KINESIN LIGHT CHAIN 3coord: 87..184
NoneNo IPR availablePANTHERPTHR45783:SF5KINESIN LIGHT CHAIN 3coord: 1..96
coord: 145..295
coord: 56..139
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..142
e-value: 2.2E-43
score: 150.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 143..296
e-value: 5.1E-41
score: 142.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 192..295
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..102
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 109..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5128contigH-elongata_contig5128:6844..11099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5128.12385.1mRNA_H-elongata_contig5128.12385.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5128 6844..11099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5128.12385.1 ID=prot_H-elongata_contig5128.12385.1|Name=mRNA_H-elongata_contig5128.12385.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp
QGKYADAEPLYERSQTIREMALGFEHPDVAQSLHYRAGFLFQQGRRSEAE
PLHKRSQAIREKALGPQHPDVAHSLRNRAVWLACEGRYDEAEALSEQSQA
IREKALGTSHPDVADSLYVRALSMCNQDRHAEAEPLFQRSQILHEKALGS
EHLDVSNVLDDRALSMYQQGRYDEAELFYNRSYAIREKVLGPDHLDVAQS
LRNRAISTCKQQDRYTEAEPLYRRVQAMRETILGPEHIDVAHVIVDRALS
LHQQGDYMRAEPLYMRATQMTENALGPEHYEVATVLKGRADMYVAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf