prot_H-elongata_contig51197.12378.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51197.12378.1
Unique Nameprot_H-elongata_contig51197.12378.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig51197.12378.1 vs. uniprot
Match: D8LBH7_ECTSI (Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH7_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 7.530e-51
Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    1 MWDHVGESRFSLQTSCRGAQMMLKYKCLVEDGRLAQPPRGEGAMPPVLDSLDKTAAGIPALILLDTSPSEGLMVLFRQRRFDLRSCGLVDAVTCVPNSWLEFYGQRR 107
            +WD+VGES F +QT+CRGAQ M KY+CLVEDGRLAQPP GEGAMPP+L+S  KTAAG+PALILLD+SP+EGL+VL RQR FD+RSCG  D VTCVP SW+E Y QRR
Sbjct:  236 LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALILLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIELYAQRR 342
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BLAST of mRNA_H-elongata_contig51197.12378.1 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.480e-49
Identity = 79/107 (73.83%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    1 MWDHVGESRFSLQTSCRGAQMMLKYKCLVEDGRLAQPPRGEGAMPPVLDSLDKTAAGIPALILLDTSPSEGLMVLFRQRRFDLRSCGLVDAVTCVPNSWLEFYGQRR 107
            +WD+VGES F +QT+CRGAQ M KY+CLVEDGRLA+PP GEGAMPP+L+   KTAAG+PALILLD+SPSEGL+VL RQR FD+RSCG  D VTCVP SW+EFY QRR
Sbjct:  236 LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAEPPIGEGAMPPLLNPFSKTAAGLPALILLDSSPSEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRR 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51197.12378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBH7_ECTSI7.530e-5173.83Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KP28_9PHAE7.480e-4973.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51197contigH-elongata_contig51197:1869..2602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51197.12378.1mRNA_H-elongata_contig51197.12378.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51197 1860..2602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51197.12378.1 ID=prot_H-elongata_contig51197.12378.1|Name=mRNA_H-elongata_contig51197.12378.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MWDHVGESRFSLQTSCRGAQMMLKYKCLVEDGRLAQPPRGEGAMPPVLDS
LDKTAAGIPALILLDTSPSEGLMVLFRQRRFDLRSCGLVDAVTCVPNSWL
EFYGQRR*
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