prot_H-elongata_contig51093.12371.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51093.12371.1
Unique Nameprot_H-elongata_contig51093.12371.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length244
Homology
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 2.340e-73
Identity = 126/251 (50.20%), Postives = 154/251 (61.35%), Query Frame = 0
Query:    1 SVEGAPECGCIETMPVVSRADCSTFSRGGLTACNNNDLNKHYNNKLGAPGGDLESNLVGTCDNVNAPVYVNYSSSAERSTSSSSYDEDTAVEAVLAACEYNTYMCCWTQND-QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYD-QDFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRD-----ELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED 244
            +VEGAPECGCIE MP VS ++CS +S  G+  C NN L   Y  +LG P G ++ NLV TCDN + P Y                           +C +NTYMCCWT+ND +G+ DNTDVCRVVD PS G+T E+PGDSEG  +CHGF W E      + L L  +V N+D +D RGYYGNIEGAP CGCIEEMPVVS A+CTT+  D     + TAC  NDLR  ++   + P G L  NLV TCDN +
Sbjct:  249 NVEGAPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRTCDNEDVPDYD------------------------YGSCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHL-LSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYE--AEYPTGEL-ANLVDTCDNAE 471          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 4.560e-70
Identity = 126/251 (50.20%), Postives = 151/251 (60.16%), Query Frame = 0
Query:    1 SVEGAPECGCIETMPVVSRADCSTFSRGGLTACNNNDLNKHYNNKLGAPGGDLESNLVGTCDNVNAPVYVNYSSSAERSTSSSSYDEDTAVEAVLAACEYNTYMCCWTQND-QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYD-QDFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRD-----ELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED 244
            +VEG P CGCIE MPVVS A CS F R G+  C  N L  HY N+L  P G+LE NLV  CDN + P Y                            C +NTYMCCWT+ND QG+ DNTDVCRV+D PS G+TTEYPG+SEG  +CHGF W E      + L L  +V ++D +D RGY+GNIEGAP CGCIEEMP VS A+CTT+  +     + TAC  NDLR  ++     P G LD NLV  CDNE+
Sbjct:  220 NVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDNEDVPDYD------------------------FRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHL-LAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTKNDLRTRYEEEY--PMGELD-NLVGECDNEE 442          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.040e-68
Identity = 122/251 (48.61%), Postives = 149/251 (59.36%), Query Frame = 0
Query:    1 SVEGAPECGCIETMPVVSRADCSTFSRGGLTACNNNDLNKHYNNKLGAPGGDLESNLVGTCDNVNAPVYVNYSSSAERSTSSSSYDEDTAVEAVLAACEYNTYMCCWTQND-QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYD-QDFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRD-----ELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED 244
            +VEG P CGCIE MPVVS A CS F   G+  C +N L   Y  KL  P G++E NLV  CDN + P Y                            C +NTYMCCWT+ND QG+ DNTDVCRV+D PS G+TTEYPG+SEG  +CHGF W E      + L L  +V ++D +D RGY+GNIEGAP CGCIEEMP VS A+CTT+  +     + TAC +NDLR  ++     P G LD NLV  CDN +
Sbjct:  263 NVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYD------------------------FRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHL-LAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNNDLRTRYEEEY--PMGELD-NLVGECDNAE 485          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 9.800e-63
Identity = 112/250 (44.80%), Postives = 143/250 (57.20%), Query Frame = 0
Query:    1 SVEGAPECGCIETMPVVSRADCSTFSRGGLTACNNNDLNKHYNNKLGAPGGDLESNLVGTCDNVNAPVYVNYSSSAERSTSSSSYDEDTAVEAVLAACEYNTYMCCWTQND-QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYDQ-DFRGYYGNIEGAPACGCIEEMPVVSYANCTTFS-----RDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNE 243
            +VEGAP+CGC+E MPVVS ++CS F   G+T C  + L  +Y +++  P G LE NLV  CDN + P +                            C+ +TYMCCWT+ND +G+ DNTDVCR+ D PS G+T EYPGDSEG  +CHG  W E      + L L  YV  +D    +GYYGNIEGAP CGC E+MP VS A+CT +S      D +  C  NDLR  +   +  P G LD NLV  CDN+
Sbjct:  197 NVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDNYDVPDFD------------------------FRECDSHTYMCCWTENDAKGVLDNTDVCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHL-LAQYVQTFDHIGNKGYYGNIEGAPMCGCAEDMPEVSKADCTNYSPTEEDEDRIRGCDPNDLRTRYD--VLYPDGDLD-NLVGRCDNQ 418          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 2.660e-54
Identity = 83/150 (55.33%), Postives = 103/150 (68.67%), Query Frame = 0
Query:   98 CEYNTYMCCWTQND--QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYDQ-DFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED 244
            CE+NTYMCCWT +D  +G+  N DVCRV++ P EG   E P D EGP YCHGF WA+G +  S  LPLYHYV N ++ D  GYYGN+EG P+CGCIE+MPVVS A C+ F  + +  C DN LR  +K +L  P G ++ NLV  CDNED
Sbjct:   14 CEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNED 163          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.800e-52
Identity = 92/174 (52.87%), Postives = 113/174 (64.94%), Query Frame = 0
Query:   74 SSAERSTSSSSYDEDTAVEAVL-AACEYNTYMCCWTQND--QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYD--QDFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDN 242
            SSA    S S+YDED  V  +L   CE++TYMCC+T +D  +G+  NTDVC V   PSEG   E PGDSEGP YCHGF W EG +  +  LPLYHYV N    ++  GYYGN+EGAP CGCIEEMP VS+A C+ FS D +  C +  L   +  RL AP G ++ NLV +CDN
Sbjct:   13 SSASDGGSCSTYDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 4.700e-42
Identity = 78/174 (44.83%), Postives = 103/174 (59.20%), Query Frame = 0
Query:   74 SSAERSTSSSSYDEDTAVEAVLA-ACEYNTYMCCWTQND--QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYD--QDFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDN 242
            SSA    S ++YDED  V  +L   CE++TYMCC+T +D  +G+  NTDVC V               +EG  YCHGF W +G +  +  LPLYHYV N    ++  GYYG++EGAP CGCIEEMP VS+A C+ F  D +  C +  L   +  RL AP G ++ NLV +CDN
Sbjct:   20 SSASDGGSCTTYDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSVP--------------NEGSVYCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 6.260e-42
Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 0
Query:   81 SSSSYDEDTAVEAVL-AACEYNTYMCCWTQND--QGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYDQ-DFRGYY-----GNIEGAPACGCIEEMPVVSYANCTTFSRDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED 244
            S S+Y+E   V  +L + CE++ YMCCWT ND   G+  N+DVCRV+D P EG + E P +SEG   CHGF WAEG +  +  LPLYHYV N  + +  G+Y      ++EG P CGCIEE+P VS + C+ +S + +  C +N L   ++  L  P G +D NLV TCDNED
Sbjct:   28 SCSTYEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNED 200          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: A0A7S2I1I6_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1I6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.290e-17
Identity = 53/141 (37.59%), Postives = 69/141 (48.94%), Query Frame = 0
Query:   88 DTAVE-----AVLAACEYNTYMCCWTQNDQGIQ---------------DNTDVCRV--VDSPSEGQTTE----YPGDSEGPTYCHGFGWAEGDEFLSVQLPLYHYVINYDQDFRGYYGNIEGAPACGCIEEMPVVSYANCT 202
            DT +E     A    C +   MCCWT +   +                DNTDVC V   +SP    T +    +PGD+EGP +C GF W E DE       L+H V+       GY  N+ GAP CGC+E+MPVVS+A C+
Sbjct:  132 DTVIEWPDYLANFQECHHRAAMCCWTADKYNVGGGSCTSAGCADGDPLDNTDVCHVDMKNSPLAAHTRDGVAVFPGDAEGPVHCQGFAWDEKDEMFRGNA-LFHVVMK-GLLSNGYTRNVPGAPMCGCVEQMPVVSHAVCS 270          
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Match: A0A7S1VY93_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY93_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.600e-15
Identity = 52/147 (35.37%), Postives = 69/147 (46.94%), Query Frame = 0
Query:   98 CEYNTYMCCWTQN-------------------DQGIQDNTDVCRVVDS--PSEGQTTE----YPGDSEGPTYCHGFGWAE--GDEFLSVQLPLYHYVINYDQ-DFRGYYGNIEGAPACGCIEEMPVVSYANCTTFSRDELTACQDND 216
            C  N  MCCW Q+                   D    DNTD+C V  S  P+  +T++    + G+ EG ++CHGF W +   DE    +     YV  YD    RGY  N+ GAP CGC+E+M VV+ A+CT  S  E      ND
Sbjct:  112 CTLNAAMCCWVQDRQAGDNNGNCATPYDENCVDADPADNTDICYVDMSRAPASSRTSDGFSLFEGEEEGDSHCHGFAWDKDPSDESALFKGNNLFYVSFYDHLQQRGYVRNVPGAPMCGCVEQMAVVTRADCTEISTSETVEFSFND 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51093.12371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT55_ECTSI2.340e-7350.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2N2_ECTSI4.560e-7050.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2N0_ECTSI2.040e-6848.61Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FT54_ECTSI9.800e-6344.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JT81_9PHAE2.660e-5455.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT53_ECTSI2.800e-5252.87Imm downregulated 17 n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L9G6_9PHAE4.700e-4244.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L319_9PHAE6.260e-4246.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2I1I6_9STRA1.290e-1737.59Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S1VY93_9STRA1.600e-1535.37Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51093contigH-elongata_contig51093:259..1774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51093.12371.1mRNA_H-elongata_contig51093.12371.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51093 259..1774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51093.12371.1 ID=prot_H-elongata_contig51093.12371.1|Name=mRNA_H-elongata_contig51093.12371.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=244bp
SVEGAPECGCIETMPVVSRADCSTFSRGGLTACNNNDLNKHYNNKLGAPG
GDLESNLVGTCDNVNAPVYVNYSSSAERSTSSSSYDEDTAVEAVLAACEY
NTYMCCWTQNDQGIQDNTDVCRVVDSPSEGQTTEYPGDSEGPTYCHGFGW
AEGDEFLSVQLPLYHYVINYDQDFRGYYGNIEGAPACGCIEEMPVVSYAN
CTTFSRDELTACQDNDLRKHHKNRLQAPGGSLDVNLVITCDNED
back to top