prot_H-elongata_contig51050.12366.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51050.12366.1
Unique Nameprot_H-elongata_contig51050.12366.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.160e-63
Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 0
Query:    1 GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLCDMF 172
            G  A VASW+LAAVL+ G PLL  P PA AISGGGLDY+GLNLTGQD SKGKYKSKDFSG+IA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GTI+TNA+ATGSYFG+N+ NVGDISGADFTDALIRKD A+ LCARPDAKGTNPTTG +TRDSLLCDMF
Sbjct:   67 GLGAAVASWTLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 8.710e-58
Identity = 134/172 (77.91%), Postives = 143/172 (83.14%), Query Frame = 0
Query:    1 GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLCDMF 172
            G  A VASW+LAAVL+ G PLL  P P AAISGGGLDY+GLNLTGQD S GKYKSK           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GTI+TNA+ATGSYFG+N+ NVGDISGADFTDALIRKD A+ LCARPDAKGTNPTTG +TRDSLLCDMF
Sbjct:   10 GLGAAVASWTLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 181          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0AXB9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXB9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 8.740e-20
Identity = 92/145 (63.45%), Postives = 105/145 (72.41%), Query Frame = 0
Query:   27 PAAAISGGGLDYSGLNLTGQDFSKGK--YKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            PA A+SGGGLDY+ L++TGQDFS     YK KDFS  IAK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A+A GSYFG +L +V  +   DF+DA I       +C R D KGTNP TG +TR+SL+C
Sbjct:   83 PAGAVSGGGLDYANLDITGQDFSNEAKTYKGKDFSQVIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVGSYFGQSLLDVKTMENGDFSDAQIPVKTLPLVCEREDVKGTNPVTGVDTRESLMC 227          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A6U6FCS6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FCS6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.290e-18
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 0
Query:   11 LAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            +AA+ L+ +  LS   PA A+SGGGLDY+GL+++      G YK KDF+  +AK  S                        XXXXXXXXXXXXX     +A   G YFG +L +V  +  ADF+DA I       +C R D KGTNP TG +TRDSL+C
Sbjct:   64 VAALALLAATALSAA-PAVAVSGGGLDYAGLDISXXXXXNGNYKGKDFTQVLAKATSFAKSNLQGCRFYKAYLVNVDFTGSXXXXXXXXXXXXXXXXXXDAQLQGVYFGQSLIDVQSMENADFSDASIPTKTLPLVCDRDDVKGTNPVTGVDTRDSLMC 221          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S2I9G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9G5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.560e-18
Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   12 AAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGK--YKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            A++ ++ S  +SPP  A A+SGGG D++ L++TGQDF+     YK KDFS  IAK                          XXXXXXXXXXXXXX          G+YF  +L +V  I  ADFTDA I       +C R DAKGTNP++GA+TRDSL+C
Sbjct:   74 ASLFVILSTAISPP-AANAVSGGGKDFANLDITGQDFANNSKDYKGKDFSQVIAKGTQFMNSNLQGCRFYKAYLVNADFSGXXXXXXXXXXXXXXXXXXXXXXXAGAYFSQSLLDVKTIENADFTDAQIPIKILPQICEREDAKGTNPSSGADTRDSLMC 232          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A1E7ER21_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER21_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.030e-17
Identity = 45/127 (35.43%), Postives = 58/127 (45.67%), Query Frame = 0
Query:   43 LTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            ++ QDFS   YK KDF+  +A++ +                                       +LTNAIA+G+YF  NL     +   DFTDA I       LC RPD KGTNPTTG +TRDS +C
Sbjct:    1 ISNQDFSNQNYKLKDFTQVLARKTNFQKSIFTGCRFQNAYLIDADFGSADLRGVSFERTNMENVVLTNAIASGAYFDQNLLEAKSVENVDFTDAQIPDKILPVLCERPDMKGTNPTTGVDTRDSAMC 127          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0UFP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFP4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.130e-15
Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    2 RSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            RS ++A+ + AA+LL  S  +     A A+SGGGLD++GL+++ QDFSKG YK KDF+  +A+  +      XXXXXXXXXXXXXXXXXXXXXXXXX XXXXX                         GADFTDA         +C RPD KGTNPTTG +TRDS +C
Sbjct:  106 RSGLLATTA-AALLLASSTFVQA---AFAVSGGGLDFAGLDISNQDFSKGDYKGKDFTQVLARNTNFAGSNLXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADFTDAQFPPKTLALMCDRPDMKGTNPTTGVDTRDSAMC 269          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: K0TQX1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX1_THAOC)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-15
Identity = 70/160 (43.75%), Postives = 82/160 (51.25%), Query Frame = 0
Query:   10 SLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            SLA  L   S  L P     A+SGGG+DY+ LNLT                       XXXXXXXXXXXXXXX     X                G  L N +A+GSYFG +L +V  + G DFTDA I     + +C R D KGTNPTTGA+TRDSL+C
Sbjct:   65 SLAPTLAAASIALGPL-ACGAVSGGGMDYANLNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNADXSGADARGAAFEDTSMDGANLRNIVASGSYFGQSLLDVESLEGGDFTDAQIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 223          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: B8LCL5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCL5_THAPS)

HSP 1 Score: 77.4 bits (189), Expect = 2.370e-13
Identity = 56/166 (33.73%), Postives = 74/166 (44.58%), Query Frame = 0
Query:   12 AAVLLVGSPLLSPPDPAA-AISGGGLDYSGLNLTGQDFSKGKYKSKDFS-------GAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 169
            A+ + VG  LLS     A A+SGGGLDY+G+++            KDF+       GA  + VS                                        L + +A GSYFG +L +V  +   DFTDA I     + +C R D KGTNPTTGA+TRDSL+C
Sbjct: 2408 ASTVAVGVMLLSTVGSTAWAVSGGGLDYAGIDIXXXXXXXXXXXXKDFTQVNTNFEGADVRGVSFEDTSMDNAN------------------------------LKDIVAVGSYFGQSLVDVKTLENGDFTDATIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 2543          
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0C287_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C287_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.510e-11
Identity = 64/144 (44.44%), Postives = 78/144 (54.17%), Query Frame = 0
Query:   27 PAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPD-AKGTNPTTGAETRDSLLC 169
            PA+AISGGG                  K KDFS  IA++ +                   XXXXXXXXXXXXXXXXXX  IL N  A G+YF ++L +   + GAD TDA +       +C +PD AKGTNP TG +TRDSL+C
Sbjct:   88 PASAISGGGXXXXXXXXXXXXXXXXXXKGKDFSQVIARQTTFKGSNLQGCRFYKALLVETXXXXXXXXXXXXXXXXXXDAILKNTNAGGAYFSASLLDAKTLEGADMTDAQLPPKLLARICEKPDFAKGTNPVTGVDTRDSLMC 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR3_ECTSI3.160e-6380.23Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFC5_9PHAE8.710e-5877.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0AXB9_9STRA8.740e-2063.45Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6U6FCS6_9STRA2.290e-1842.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2I9G5_9STRA5.560e-1844.38Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7ER21_9STRA6.030e-1735.43Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S0UFP4_9STRA2.130e-1550.00Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
K0TQX1_THAOC3.910e-1543.75Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8LCL5_THAPS2.370e-1333.73Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0C287_9STRA3.510e-1144.44Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 81..118
e-value: 2.1E-8
score: 33.6
NoneNo IPR availableGENE3D2.160.20.100coord: 31..172
e-value: 1.3E-32
score: 114.0
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 8..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.597
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 37..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51050contigH-elongata_contig51050:81..3317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51050.12366.1mRNA_H-elongata_contig51050.12366.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51050 81..3860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51050.12366.1 ID=prot_H-elongata_contig51050.12366.1|Name=mRNA_H-elongata_contig51050.12366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSK
GKYKSKDFSGAIAKEVSFKGSDLRGARFFKADLKEADFTGANLGTASLEE
ADLDGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARP
DAKGTNPTTGAETRDSLLCDMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat