mRNA_H-elongata_contig51050.12366.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51050.12366.1
Unique NamemRNA_H-elongata_contig51050.12366.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 4.310e-60
Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 1 
Query:    1 GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLCDMF 516
            G  A VASW+LAAVL+ G PLL  P PA AISGGGLDY+GLNLTGQD SKGKYKSKDFSG+IA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GTI+TNA+ATGSYFG+N+ NVGDISGADFTDALIRKD A+ LCARPDAKGTNPTTG +TRDSLLCDMF
Sbjct:   67 GLGAAVASWTLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.010e-54
Identity = 134/172 (77.91%), Postives = 143/172 (83.14%), Query Frame = 1 
Query:    1 GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLCDMF 516
            G  A VASW+LAAVL+ G PLL  P P AAISGGGLDY+GLNLTGQD S GKYKSK           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GTI+TNA+ATGSYFG+N+ NVGDISGADFTDALIRKD A+ LCARPDAKGTNPTTG +TRDSLLCDMF
Sbjct:   10 GLGAAVASWTLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 181
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0AXB9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXB9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.860e-18
Identity = 92/145 (63.45%), Postives = 105/145 (72.41%), Query Frame = 1 
Query:   79 PAAAISGGGLDYSGLNLTGQDFSKGK--YKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            PA A+SGGGLDY+ L++TGQDFS     YK KDFS  IAK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A+A GSYFG +L +V  +   DF+DA I       +C R D KGTNP TG +TR+SL+C
Sbjct:   83 PAGAVSGGGLDYANLDITGQDFSNEAKTYKGKDFSQVIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVGSYFGQSLLDVKTMENGDFSDAQIPVKTLPLVCEREDVKGTNPVTGVDTRESLMC 227
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A6U6FCS6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FCS6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.290e-16
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 1 
Query:   31 LAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            +AA+ L+ +  LS   PA A+SGGGLDY+GL+++      G YK KDF+  +AK  S                        XXXXXXXXXXXXX     +A   G YFG +L +V  +  ADF+DA I       +C R D KGTNP TG +TRDSL+C
Sbjct:   64 VAALALLAATALSAA-PAVAVSGGGLDYAGLDISXXXXXNGNYKGKDFTQVLAKATSFAKSNLQGCRFYKAYLVNVDFTGSXXXXXXXXXXXXXXXXXXDAQLQGVYFGQSLIDVQSMENADFSDASIPTKTLPLVCDRDDVKGTNPVTGVDTRDSLMC 221
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S2I9G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9G5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.040e-16
Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 1 
Query:   34 AAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGK--YKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            A++ ++ S  +SPP  A A+SGGG D++ L++TGQDF+     YK KDFS  IAK                          XXXXXXXXXXXXXX          G+YF  +L +V  I  ADFTDA I       +C R DAKGTNP++GA+TRDSL+C
Sbjct:   74 ASLFVILSTAISPP-AANAVSGGGKDFANLDITGQDFANNSKDYKGKDFSQVIAKGTQFMNSNLQGCRFYKAYLVNADFSGXXXXXXXXXXXXXXXXXXXXXXXAGAYFSQSLLDVKTIENADFTDAQIPIKILPQICEREDAKGTNPSSGADTRDSLMC 232
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A1E7ER21_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER21_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.470e-15
Identity = 45/127 (35.43%), Postives = 58/127 (45.67%), Query Frame = 1 
Query:  127 LTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            ++ QDFS   YK KDF+  +A++ +                                       +LTNAIA+G+YF  NL     +   DFTDA I       LC RPD KGTNPTTG +TRDS +C
Sbjct:    1 ISNQDFSNQNYKLKDFTQVLARKTNFQKSIFTGCRFQNAYLIDADFGSADLRGVSFERTNMENVVLTNAIASGAYFDQNLLEAKSVENVDFTDAQIPDKILPVLCERPDMKGTNPTTGVDTRDSAMC 127
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0UFP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFP4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 8.830e-14
Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 1 
Query:    4 RSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            RS ++A+ + AA+LL  S  +     A A+SGGGLD++GL+++ QDFSKG YK KDF+  +A+  +      XXXXXXXXXXXXXXXXXXXXXXXXX XXXXX                         GADFTDA         +C RPD KGTNPTTG +TRDS +C
Sbjct:  106 RSGLLATTA-AALLLASSTFVQA---AFAVSGGGLDFAGLDISNQDFSKGDYKGKDFTQVLARNTNFAGSNLXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADFTDAQFPPKTLALMCDRPDMKGTNPTTGVDTRDSAMC 269
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: K0TQX1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX1_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 1.470e-13
Identity = 70/160 (43.75%), Postives = 82/160 (51.25%), Query Frame = 1 
Query:   28 SLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            SLA  L   S  L P     A+SGGG+DY+ LNLT                       XXXXXXXXXXXXXXX     X                G  L N +A+GSYFG +L +V  + G DFTDA I     + +C R D KGTNPTTGA+TRDSL+C
Sbjct:   65 SLAPTLAAASIALGPL-ACGAVSGGGMDYANLNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNADXSGADARGAAFEDTSMDGANLRNIVASGSYFGQSLLDVESLEGGDFTDAQIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 223
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: B8LCL5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCL5_THAPS)

HSP 1 Score: 77.0 bits (188), Expect = 1.410e-11
Identity = 56/166 (33.73%), Postives = 74/166 (44.58%), Query Frame = 1 
Query:   34 AAVLLVGSPLLSPPDPAA-AISGGGLDYSGLNLTGQDFSKGKYKSKDFS-------GAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPDAKGTNPTTGAETRDSLLC 507
            A+ + VG  LLS     A A+SGGGLDY+G+++            KDF+       GA  + VS                                        L + +A GSYFG +L +V  +   DFTDA I     + +C R D KGTNPTTGA+TRDSL+C
Sbjct: 2408 ASTVAVGVMLLSTVGSTAWAVSGGGLDYAGIDIXXXXXXXXXXXXKDFTQVNTNFEGADVRGVSFEDTSMDNAN------------------------------LKDIVAVGSYFGQSLVDVKTLENGDFTDATIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 2543
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BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Match: A0A7S0C287_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C287_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.560e-10
Identity = 64/144 (44.44%), Postives = 78/144 (54.17%), Query Frame = 1 
Query:   79 PAAAISGGGLDYSGLNLTGQDFSKGKYKSKDFSGAIAKEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARPD-AKGTNPTTGAETRDSLLC 507
            PA+AISGGG                  K KDFS  IA++ +                   XXXXXXXXXXXXXXXXXX  IL N  A G+YF ++L +   + GAD TDA +       +C +PD AKGTNP TG +TRDSL+C
Sbjct:   88 PASAISGGGXXXXXXXXXXXXXXXXXXKGKDFSQVIARQTTFKGSNLQGCRFYKALLVETXXXXXXXXXXXXXXXXXXDAILKNTNAGGAYFSASLLDAKTLEGADMTDAQLPPKLLARICEKPDFAKGTNPVTGVDTRDSLMC 231
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51050.12366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR3_ECTSI4.310e-6080.23Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFC5_9PHAE1.010e-5477.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0AXB9_9STRA5.860e-1863.45Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6U6FCS6_9STRA1.290e-1642.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2I9G5_9STRA3.040e-1644.38Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7ER21_9STRA2.470e-1535.43Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S0UFP4_9STRA8.830e-1450.00Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
K0TQX1_THAOC1.470e-1343.75Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8LCL5_THAPS1.410e-1133.73Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0C287_9STRA7.560e-1044.44Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51050contigH-elongata_contig51050:81..3860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.4
Seed ortholog evalue8.8e-50
Seed eggNOG ortholog2880.D7FZR3
EggNOG free text desc.Pentapeptide repeats (8 copies)
EggNOG OGs2CYH2@1,2S4CZ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPentapeptide repeat
Ec32 orthologEc-21_004050.1
Exons4
Model size1062
Cds size519
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51050.12366.1prot_H-elongata_contig51050.12366.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51050 81..3317 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930836.8946338-CDS-H-elongata_contig51050:80..2481622930836.8946338-CDS-H-elongata_contig51050:80..248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 81..248 +
1691679591.463074-CDS-H-elongata_contig51050:80..2481691679591.463074-CDS-H-elongata_contig51050:80..248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 81..248 +
1622930836.911655-CDS-H-elongata_contig51050:1585..17311622930836.911655-CDS-H-elongata_contig51050:1585..1731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 1586..1731 +
1691679591.4748776-CDS-H-elongata_contig51050:1585..17311691679591.4748776-CDS-H-elongata_contig51050:1585..1731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 1586..1731 +
1622930837.1330109-CDS-H-elongata_contig51050:2269..23271622930837.1330109-CDS-H-elongata_contig51050:2269..2327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 2270..2327 +
1691679591.4845014-CDS-H-elongata_contig51050:2269..23271691679591.4845014-CDS-H-elongata_contig51050:2269..2327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 2270..2327 +
1622930837.1455572-CDS-H-elongata_contig51050:3170..33171622930837.1455572-CDS-H-elongata_contig51050:3170..3317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 3171..3317 +
1691679591.496649-CDS-H-elongata_contig51050:3170..33171691679591.496649-CDS-H-elongata_contig51050:3170..3317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51050 3171..3317 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930837.1568263-UTR-H-elongata_contig51050:3317..38601622930837.1568263-UTR-H-elongata_contig51050:3317..3860Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51050 3318..3860 +
1691679591.5065346-UTR-H-elongata_contig51050:3317..38601691679591.5065346-UTR-H-elongata_contig51050:3317..3860Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51050 3318..3860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51050.12366.1

>prot_H-elongata_contig51050.12366.1 ID=prot_H-elongata_contig51050.12366.1|Name=mRNA_H-elongata_contig51050.12366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
GRSAVVASWSLAAVLLVGSPLLSPPDPAAAISGGGLDYSGLNLTGQDFSK
GKYKSKDFSGAIAKEVSFKGSDLRGARFFKADLKEADFTGANLGTASLEE
ADLDGTILTNAIATGSYFGSNLGNVGDISGADFTDALIRKDNARALCARP
DAKGTNPTTGAETRDSLLCDMF*
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mRNA from alignment at H-elongata_contig51050:81..3860+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51050.12366.1 ID=mRNA_H-elongata_contig51050.12366.1|Name=mRNA_H-elongata_contig51050.12366.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3780bp|location=Sequence derived from alignment at H-elongata_contig51050:81..3860+ (Himanthalia elongata Himel1 dioecious)
GGTCGAAGCGCTGTCGTGGCGAGCTGGTCACTGGCCGCCGTCCTCCTTGT
GGGAAGCCCCCTGCTGTCACCGCCCGACCCAGCCGCGGCAATCTCCGGGG
GCGGTCTCGACTACTCCGGGCTGAACCTCACGGGGCAAGACTTCTCCAAG
GGGAAGTACAAGTCAAAGGTAAGCGCGGTGTCACGAGTGCCATCATCACT
ATATGTGACGTTGTATTCGTACTGCGGTGCTTACCCTCTTACCTACCCTT
ACATACGTCTGCGGCTACGGCCCTCTCTGGGTAGAGGAAGGGGAGAGAGA
GACGGAGGTGGAGGAGGGGGTGGGGGGGGGGGGGGGGGCATGAGGGGAGA
AAAATGATAATGATAAATAATATTTCGTTTATCAAGAGAGGAGAAGTCTG
AGCGACGATATTTTTAGCATGCGCCTTTGGTGCAGTCGCCATAGGGCTGC
GGTGTTCGTTGGGAGCTATGTATTTAGCTCTCAGGAATTATGCTGTTTTT
GTTTGTGGGGCGCTGACACGGCTTCCTCCCCCCCTAGACCAGACCCTAGA
CACTGATTGTATCTTGTATATAGTGTGGATAATCGCATTCGTCATCGCCA
GCAGCAGCAGCAGCAGCCAACAGCGCGGAGCAAACAACCAGAATGGATCG
ACTTAGACGGGAAAATCAAGTCACCTACGCGATGCGATGCTAAACGACCC
TCCTCCAGCCTACATCGCCCGCAGCATTGGATCGATATATCCCCCTGGCT
AACGCTCTACAAGTGATACTCGCTCAAGGGCTGCTGAGACAATTTTTGAA
GCTCCGAAAACCACAAATAGTAATCCCTCTGCGATACTATCATTCCCGAT
GCGGCGCAATCACTGCCAAGTTCCGAAGGGAGCGTCTTGTCGCCAAAATA
TCAAAGCGGTTAGTTACCGAACGGGACTGTCAGACCGACCTTATAACGGT
ATTCTCATGTATTCGGTTTGCCGAGTACGTCGGATGTAATCGACGACGAT
CAGGCGCTAAATAGCATGCCTGCCGGCGGGGATGAAAGTACCAGTGTCCG
GTCGACTGGTTGGCTCACGTGATAGACATGATATCGTCTTGTTGTATTGG
TTTCTTTCGGAAAAAAAGAAGAATCGGGCGAAGATCAATCAGTGGCCATT
CTTAGCTCTAGCCAACTCTGAACAAAGCGGACCTTGCTTGTGAACAACTG
GCAGAAATGTGTGGGTTGTACGACATCTGGGTAGTTCATGTGACGCATGA
GCCGTGTGTTCTATGAAGGTCGTATAACGGTATGTACATAGTACATAGTA
ATAGCGGGACAAGAGTGGGTGTGGATGGAGCGGCATATCATTTTCCTATA
ATTTTCCCTATCTTTCTAAAAAAAAATGAACTCATTCCAACCCTCCGAAC
ATCAGTCAGTCAGAGTCTTACTTTAATTGCTTCGTGTGGGCGAAACTCAT
AATTATGTGATCGAGAACCAACCTAAAAAAAAAAAAAAACTCCCCGCGCT
CGCAGGACTTTAGTGGTGCAATCGCGAAGGAGGTCAGCTTTAAAGGGTCG
GACCTGCGAGGGGCCCGCTTCTTCAAGGCGGACCTGAAAGAGGCAGACTT
CACCGGCGCCAACCTCGGCACGGCGTCGCTCGAGGAGGCGGATCTTGACG
GGTGAGCGACCTGGGGTAGAGGATGGCAGAAGTGGGGAGCGGGGCGGGAT
TGGACGGGATGGGGGTAGGGACACCGAAATGATGAAACTTCCTCGAAATA
TGGGTGTATTTCTGGCAAGAATGTGTCTTTGGTCGTCCGCGCTCGTCTCG
ACGCGTCGAGTCTCGTCGAGTTGAGCTGAACCGAAATAATGAGATTATCG
AGGTAAGCAACCGGGTGACCTAAGAGCTTCCGGTGGAGGACTGCAAATCC
ATTGGGGAGAAGGCTCGGGTCGGGGAGGAGGAGGGCGTTACTTACACGGA
AGTAATGCTGTCGTGTGTGATAACGTGTGCTTCCGTCCTGTCTAATTATA
GTACGACGACGATCGATCGATAGCTGGTGCTGCTGAGCGTTTCTCGAGGC
AGCGCGCGTCAGGGTTACGAGAAAGCGACACGCGCCCTATTTAGTCGCTT
TCATCGCGTCGATTTCGTTTCGTCGGACACGTTTCGTCGCATCACGTCTC
TTTAGCCTCCTCTATTCTCCTTCCTCACGTACGCCGCAGGACCATCTTGA
CAAACGCAATTGCCACCGGGAGCTACTTCGGCAGCAACCTCGGCAACGTG
AGGAGATTGATATATGGTCGCGTGATTGCGATCCTCAACCCCCTTTCCTC
CACGGCCGTACAGTAGCAATATCAATATCAGCAATATATCCACAACCCAC
TGCTAGAAAGAAAAAAATAATAAATTATACGTAAAGCAATCAGCCGCCTT
CGAGCTTCGTGTATTCTTTTGTTTTTGGTGGGGGGTGGATGGGTGAAAGA
GTGTTGGGCGCTAAAAGAGTGACGCACCTCTGTTTCATCAATGGTTGTGC
CCGTCGGAGAACGGCCGGCCTCGTCTCCGGCCCAACCTTTGCTCCCGTGC
TCATCTCTTGAAACCTAGACGATGACGTTGTCGTCATCGTCGTCGTGGTC
ATTGCCTGTCGAATCGAATCGAATCGAATCGAATCTCCAGCCCTGGAATG
GCGCGAAAAAAAACAAAAGAAACACTGGCATTGCCTTTCTCGATTTCGCT
TCCGCCGGTTCTATCGCGAACCAGGTTAGTACAGAAACACGATCGCGTCA
CCGCGGCCGTCTCATCACATCCCTATCACATGCGTAGGACGAGAGGGTCG
CCAACTTGAACCTGACTGAAAGCGACGGACAAAGGGCCGCAGCGTCCTGC
ATTCGCGCAACCTCTTGAGTCACCCCCCCCCCTCCCCGCCCTCACCACCC
CTCCTGCGCTAACCCACGTGACGTCAGAGATCTCGATCCCTCTTTAGCAC
CGTAAGTCGCCCGGAAAAGCGAAACCGGTCGATCAGCTGTTCCACGAAAA
CCTAAGTATTCATCCGTCCGCCCGCGTCGGCGTTCGTCTTTACATTTTTT
GCCGTGCGCTCCGGGTGCTCTCTCTACTCGGCTCGAAAAGGTGGGGGACA
TATCGGGGGCGGATTTCACTGACGCCCTCATCCGGAAGGACAACGCGAGG
GCCCTCTGCGCAAGGCCAGACGCGAAGGGCACCAACCCTACGACGGGCGC
GGAAACCAGGGACTCGCTGCTCTGCGATATGTTCTAGGTTACCCTCTAAT
ATATAATACTATAGTATTGTGATTTATGGTATAGTATAGTGCGCTACAAT
GTGGTATGTCGTGGTATGGTACAGGGCGGTAAAGTTGAGTCGTGTGACGG
CCTCGCTGCACACACCTACACACGCCCCAACTCTTATTTTTGTGTTTGAT
CTCTCTTCTCTCTTTCGAAGCCGTCGTCGTTAAAGGCGTTAAAGGCGCTG
CGAGTGCAAGTGTGATCGAACGTTACGCCCTCCATTTATATTTACACGGA
GCAACTATAATTGAATCCCCCATTGGGAGGATCAATGTGAGAGTAACCTA
GAAGAGCTAGCATGACAGGGCCGAATTGCGCGGTTATGTGCAATTTAATA
AATACACACACACGCACACACACAAAAAATTGAATCTCCCATTGGGAGGA
TCAATGCGAGAGTAGCCTAGAAGAGCTAGGATTACGCGGTTATGTACAAT
TTAATAAATACACACACACACATTGATACCCCCCTAGGAGGATCAATACG
AGTGACATAGAAGGACTAGGACGACAGGGC
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Coding sequence (CDS) from alignment at H-elongata_contig51050:81..3860+

>mRNA_H-elongata_contig51050.12366.1 ID=mRNA_H-elongata_contig51050.12366.1|Name=mRNA_H-elongata_contig51050.12366.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at H-elongata_contig51050:81..3860+ (Himanthalia elongata Himel1 dioecious)
GGTCGAAGCGCTGTCGTGGCGAGCTGGTCACTGGCCGCCGTCCTCCTTGT
GGGAAGCCCCCTGCTGTCACCGCCCGACCCAGCCGCGGCAATCTCCGGGG
GCGGTCTCGACTACTCCGGGCTGAACCTCACGGGGCAAGACTTCTCCAAG
GGGAAGTACAAGTCAAAGGGTCGAAGCGCTGTCGTGGCGAGCTGGTCACT
GGCCGCCGTCCTCCTTGTGGGAAGCCCCCTGCTGTCACCGCCCGACCCAG
CCGCGGCAATCTCCGGGGGCGGTCTCGACTACTCCGGGCTGAACCTCACG
GGGCAAGACTTCTCCAAGGGGAAGTACAAGTCAAAGGACTTTAGTGGTGC
AATCGCGAAGGAGGTCAGCTTTAAAGGGTCGGACCTGCGAGGGGCCCGCT
TCTTCAAGGCGGACCTGAAAGAGGCAGACTTCACCGGCGCCAACCTCGGC
ACGGCGTCGCTCGAGGAGGCGGATCTTGACGGGACTTTAGTGGTGCAATC
GCGAAGGAGGTCAGCTTTAAAGGGTCGGACCTGCGAGGGGCCCGCTTCTT
CAAGGCGGACCTGAAAGAGGCAGACTTCACCGGCGCCAACCTCGGCACGG
CGTCGCTCGAGGAGGCGGATCTTGACGGGACCATCTTGACAAACGCAATT
GCCACCGGGAGCTACTTCGGCAGCAACCTCGGCAACGACCATCTTGACAA
ACGCAATTGCCACCGGGAGCTACTTCGGCAGCAACCTCGGCAACGTGGGG
GACATATCGGGGGCGGATTTCACTGACGCCCTCATCCGGAAGGACAACGC
GAGGGCCCTCTGCGCAAGGCCAGACGCGAAGGGCACCAACCCTACGACGG
GCGCGGAAACCAGGGACTCGCTGCTCTGCGATATGTTCTAGGTGGGGGAC
ATATCGGGGGCGGATTTCACTGACGCCCTCATCCGGAAGGACAACGCGAG
GGCCCTCTGCGCAAGGCCAGACGCGAAGGGCACCAACCCTACGACGGGCG
CGGAAACCAGGGACTCGCTGCTCTGCGATATGTTCTAG
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