prot_H-elongata_contig51039.12363.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51039.12363.1
Unique Nameprot_H-elongata_contig51039.12363.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
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BLAST of mRNA_H-elongata_contig51039.12363.1 vs. uniprot
Match: A0A6H5L2S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S8_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 5.640e-29
Identity = 79/170 (46.47%), Postives = 97/170 (57.06%), Query Frame = 0 
Query:    1 APLEVLLEELKATAAAA---------ASEASWASLCFQETIVTELLESAIAERYPPRAEYVSRLTKMLLDDCEMAEEEAAEGLLRARMACMSSPLTDVAGGLDGETAFESYWFPLLRR------TGGCCTPRRHPRDFEEAFERGAFASFRVANRDNEVRWV-GVTCQGV 154
            APL+ L+ ELKA+AA +         +S + W SL FQE +  ELL+  IA  +PPR EYVSR+TK+LL+  E A +E AEGLL ARMA               ETAFES+WFP          TG  C+ +     F+E  E GAF SFRVANRDNEV +  GV C  V
Sbjct:   15 APLDALVGELKASAAESRREDETGLPSSSSLWTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMA--------------DETAFESFWFPRRAALCDGFSTGSDCSAK----GFQEE-EGGAFFSFRVANRDNEVGFFSGVVCFAV 165
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BLAST of mRNA_H-elongata_contig51039.12363.1 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.060e-28
Identity = 80/160 (50.00%), Postives = 96/160 (60.00%), Query Frame = 0 
Query:    1 APLEVLLEELKATAAAAASE------------ASWASLCFQETIVTELLESAIAERYPPRAEYVSRLTKMLLDDCEMAEEEAAEGLLRARMACMSSPLTDVAGGLDGETAFESYWFPLLRRTGGC----CTPRRHPRDFEEAFERGAFASFRVANRDNEV 144
            APLE L+ ELKA+AA +  E            +SW SL FQE + TELL+  IA  + PR EYVSR+TK+LL+  E A +E AEGLL ARMAC+SS      GG   +TAFES+WFP  RR   C           + F+E  E G F SFRVANRDNEV
Sbjct:   15 APLEALVGELKASAAESRGEDETGLRSSTSSLSSWTSLGFQERVATELLDCPIAAEFTPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSS--LRGGGGHSDDTAFESFWFP--RRAALCDIISTGSDYSAKGFQEE-EGGTFFSFRVANRDNEV 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51039.12363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2S8_9PHAE5.640e-2946.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXM3_ECTSI1.060e-2850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51039contigH-elongata_contig51039:386..1383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51039.12363.1mRNA_H-elongata_contig51039.12363.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51039 386..1570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51039.12363.1 ID=prot_H-elongata_contig51039.12363.1|Name=mRNA_H-elongata_contig51039.12363.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
APLEVLLEELKATAAAAASEASWASLCFQETIVTELLESAIAERYPPRAE
YVSRLTKMLLDDCEMAEEEAAEGLLRARMACMSSPLTDVAGGLDGETAFE
SYWFPLLRRTGGCCTPRRHPRDFEEAFERGAFASFRVANRDNEVRWVGVT
CQGVCLHV*
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