prot_H-elongata_contig50972.12355.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50972.12355.1
Unique Nameprot_H-elongata_contig50972.12355.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA)

HSP 1 Score: 196 bits (497), Expect = 6.140e-57
Identity = 141/219 (64.38%), Postives = 169/219 (77.17%), Query Frame = 0
Query:    1 MIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 219
            M+FEKLV+T  GVTKE+MSQPAFA L  LS P++H++NI F+ALFR VCKMMKIS+IDDF+LKDMS+P   RL RQLSA INFVRFRE K+ MY+E +A+K++V   +KA++LR+ ++ ++L+D+Q +M          XXXXXXXXXXXXXXXXXXXXXXXXXXX                AALKQAEVEK RLQGQVV SPQRILREVADQQQALDQ
Sbjct:   47 MVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQVVNSPQRILREVADQQQALDQ 265          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: D8LMS3_ECTSI (Centromere-associated protein NUF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMS3_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.000e-44
Identity = 133/219 (60.73%), Postives = 162/219 (73.97%), Query Frame = 0
Query:    1 MIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 219
            M+FE+LV+T  GVTKE+MSQP FA L  L+YP++H+E+IAF+ALFR VC+MM+ISRI+DF+LKDMS+P  KRL RQLSAVINFVRF+EGKEH+Y +AMAKK+ +            ++ EE ED+QD+M                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             LQ QVV+SP+RILREV+D QQ+L+Q
Sbjct:   47 MLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVCRMMRISRIEDFALKDMSDPNQKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAXXXXXXXXXXKLQEEHEDIQDRMAEKNKAIEAVNAKHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQAQVVSSPKRILREVSDLQQSLEQ 265          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.200e-25
Identity = 75/218 (34.40%), Postives = 105/218 (48.17%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVADQQQALDQ 219
            +F KLV+   GVT+E+M+QP FA L+VL+Y  +HE+++  +A FRAV KMM  S + DFS  D+  P   RL RQLSAVINF  FREG+  +Y     +K  +    +A    +  +  EL  L ++                                                         K+A +E+ RLQ Q+V+SP RI RE+ADQQ AL+Q
Sbjct:   57 VFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQIVSSPDRIRREMADQQAALEQ 274          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 8.340e-25
Identity = 69/209 (33.01%), Postives = 106/209 (50.72%), Query Frame = 0
Query:    3 FEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVA 211
            +E LV+  TG+TKE+MSQPAF+ ++ L+YP++HEE+I  +A FRA  KMM +  + DFS+KD+  P+PKR+ R LSA+INF +FRE +  MY E   K+  + +  K  Q     V +EL  L+++                                                      +AL+    E+ + +GQ+V SP+R+ RE+A
Sbjct:   78 YEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELA 286          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.590e-24
Identity = 69/209 (33.01%), Postives = 106/209 (50.72%), Query Frame = 0
Query:    3 FEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAKKRAVREKAKAAQLRHSEVVEELEDLQDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAALKQAEVEKGRLQGQVVTSPQRILREVA 211
            +E LV+  TG+TKE+MSQPAF+ ++ L+YP++HEE+I  +A FRA  KMM +  + DFS+KD+  P+PKR+ R LSA+INF +FRE +  MY E   K+  + +  K  Q     V +EL  L+++                                                      +AL+    E+ + +GQ+V SP+R+ RE+A
Sbjct:  732 YEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELA 940          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2V0P211_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P211_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 9.200e-20
Identity = 51/127 (40.16%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAK-------KRAVREKAKAAQLRHSEVVEE 121
            IFE ++   TG+T+ED++QP FAA+    YP++H+E+IA  + F  + ++M +  + DF +KD+ +P P RL R LSA+INF +FRE K   Y E  A+       KRA+RE+ +A +     + EE
Sbjct:   41 IFENILVNLTGITREDLNQPVFAAIDAFEYPELHDESIAARSFFAQLSRLMAVCGVKDFGMKDVHKPDPARLRRHLSAIINFAKFREEKLVAYAELQARLESLAEQKRALREEQEARECELQRLQEE 167          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2D4C6D6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D6_PYTIN)

HSP 1 Score: 95.1 bits (235), Expect = 3.860e-19
Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 88
            + E  ++T  GV++E+M+QP FA LSVLSYP++HE++I  +  FR   K+M+   I DFS+KD+  P PKR+ RQLSA+INF +FR+
Sbjct:   64 VLEVFIETTMGVSREEMNQPQFAGLSVLSYPELHEDSIPELTFFRQASKLMQACGIYDFSMKDVLTPNPKRVRRQLSALINFAKFRD 150          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: F0WBG7_9STRA (Kinetochore protein NUF2like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBG7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.880e-19
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 88
            IFE  ++T  G++KE+MSQPAF+ L  L +P++HEE+I  +  FR + K+M    I DF+ +D+  P PKRL RQLSA+INF +FRE
Sbjct:   65 IFEVFIETIMGISKEEMSQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFNFRDLLHPSPKRLRRQLSALINFAKFRE 151          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: K3X7R5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7R5_GLOUD)

HSP 1 Score: 94.4 bits (233), Expect = 7.070e-19
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFRE 88
            + E  ++   GVT+E+M+QPAFA LS LSYP++HE+++  +A FR   K++    + DF LKD+  P PKR+ RQLSA+INF +FRE
Sbjct:   62 VLEVFIENIMGVTREEMNQPAFAGLSALSYPELHEDSVPELAFFRTAAKLLTACGVYDFGLKDIITPTPKRVRRQLSALINFAKFRE 148          
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Match: A0A2K1JPN4_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JPN4_PHYPA)

HSP 1 Score: 93.6 bits (231), Expect = 1.270e-18
Identity = 40/90 (44.44%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    2 IFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCKMMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKE 91
            ++E LV    G+T+E++ QPAF A+  L YP++HEE++  +A  RA+ K+M ++ +DDFS  D+ +P+ KR I  LSA+IN ++F++GKE
Sbjct:   41 VYESLVLNIMGITREELQQPAFHAIEKLEYPELHEESVGILASIRAISKLMAVTGVDDFSTMDIFKPESKRTITHLSAIINLLKFKQGKE 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50972.12355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G7NUH2_SACJA6.140e-5764.38Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepI... [more]
D8LMS3_ECTSI3.000e-4460.73Centromere-associated protein NUF2 n=2 Tax=Ectocar... [more]
A0A835ZCC3_9STRA1.200e-2534.40Nuf2 family-domain-containing protein n=1 Tax=Trib... [more]
W7TPN5_9STRA8.340e-2533.01Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis g... [more]
A0A4D9D8Z4_9STRA1.590e-2433.01Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2V0P211_9CHLO9.200e-2040.16Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A2D4C6D6_PYTIN3.860e-1950.57Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
F0WBG7_9STRA3.880e-1950.57Kinetochore protein NUF2like protein putative n=1 ... [more]
K3X7R5_GLOUD7.070e-1949.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2K1JPN4_PHYPA1.270e-1844.44Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..142
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availablePANTHERPTHR21650MEMBRALIN/KINETOCHORE PROTEIN NUF2coord: 1..218
NoneNo IPR availablePANTHERPTHR21650:SF2KINETOCHORE PROTEIN NUF2coord: 1..218
IPR005549Kinetochore protein Nuf2PFAMPF03800Nuf2coord: 1..100
e-value: 2.6E-30
score: 105.4
IPR038275Nuf2, N-terminal domain superfamilyGENE3D1.10.418.60coord: 1..123
e-value: 8.7E-34
score: 118.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50972contigH-elongata_contig50972:1387..3629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50972.12355.1mRNA_H-elongata_contig50972.12355.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50972 1363..3629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50972.12355.1 ID=prot_H-elongata_contig50972.12355.1|Name=mRNA_H-elongata_contig50972.12355.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MIFEKLVDTATGVTKEDMSQPAFAALSVLSYPDIHEENIAFMALFRAVCK
MMKISRIDDFSLKDMSEPKPKRLIRQLSAVINFVRFREGKEHMYREAMAK
KRAVREKAKAAQLRHSEVVEELEDLQDKMAEKKEAIKEITAKTNAVKSET
AELSRSAVAIREECAELKKASFAAKDRVADVQAALKQAEVEKGRLQGQVV
TSPQRILREVADQQQALDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005549Kinetochore_Nuf2
IPR038275Nuf2_N_sf