prot_H-elongata_contig50837.12342.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50837.12342.1
Unique Nameprot_H-elongata_contig50837.12342.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
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BLAST of mRNA_H-elongata_contig50837.12342.1 vs. uniprot
Match: D8LIS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS6_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 5.340e-38
Identity = 72/102 (70.59%), Postives = 77/102 (75.49%), Query Frame = 0 
Query:    1 AGPFQASRRQLTNLCQSAGTPMGFDCLTRLLLGKSFPSE-----------GSLKVDAPRIRKCFSALAAQIGNHPDRGPLDYHALGVGRCVFTLRDARVAAL 91
            +G   ASRRQLTNLCQS GTP GFDCLTR LLG  +P             GS +VD PR+RKCFSALAAQ+GNHPDRG LDYHALGVGRCVFTLR ARVAAL
Sbjct:  310 SGYLVASRRQLTNLCQSNGTPTGFDCLTRYLLGNRYPQPTGPASNSRVGPGSNRVDTPRVRKCFSALAAQVGNHPDRGQLDYHALGVGRCVFTLRRARVAAL 411
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BLAST of mRNA_H-elongata_contig50837.12342.1 vs. uniprot
Match: A0A6H5K430_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K430_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.770e-37
Identity = 72/102 (70.59%), Postives = 77/102 (75.49%), Query Frame = 0 
Query:    1 AGPFQASRRQLTNLCQSAGTPMGFDCLTRLLLGKSFPSE-----------GSLKVDAPRIRKCFSALAAQIGNHPDRGPLDYHALGVGRCVFTLRDARVAAL 91
            +G   ASRRQLTNLCQS GTP GFDCLTR LLG  +P             GS +VD PR+RKCFSALAAQ+GNHPDRG LDYHALGVGRCVFTLR ARVAAL
Sbjct:  818 SGYLVASRRQLTNLCQSNGTPTGFDCLTRYLLGNRYPQPTGPGSSSRVGPGSNRVDTPRVRKCFSALAAQVGNHPDRGQLDYHALGVGRCVFTLRRARVAAL 919
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50837.12342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIS6_ECTSI5.340e-3870.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K430_9PHAE2.770e-3770.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50837contigH-elongata_contig50837:3265..3585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50837.12342.1mRNA_H-elongata_contig50837.12342.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50837 3265..3585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50837.12342.1 ID=prot_H-elongata_contig50837.12342.1|Name=mRNA_H-elongata_contig50837.12342.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
AGPFQASRRQLTNLCQSAGTPMGFDCLTRLLLGKSFPSEGSLKVDAPRIR
KCFSALAAQIGNHPDRGPLDYHALGVGRCVFTLRDARVAALERAAAASAA
EAAGGSA
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