prot_H-elongata_contig50821.12336.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50821.12336.1
Unique Nameprot_H-elongata_contig50821.12336.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig50821.12336.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 5.430e-12
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:   19 MSTPNINH--ANEEGDHAAKFNRSSSVGPGMTASTLNPVQSNRRTLYLNLPFF 69
            MSTPNIN    +  G + AKFNRSSSVGPG+ AS LNP Q NRR LY+NLPFF
Sbjct:    1 MSTPNINQLVGDAAGGNHAKFNRSSSVGPGIAASNLNPQQRNRRALYVNLPFF 53
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BLAST of mRNA_H-elongata_contig50821.12336.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.700e-10
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:   14 RYGSAMSTPNINHANE-EGDHAAKFNRSSSVGPGMTASTLNPVQSNRRTLYLNLPF 68
            +YG+ MST NI    + EG++ AKFNRSSSVGPGMT + LNP   +RR LY +LPF
Sbjct:    6 KYGTVMSTSNIESFYQGEGENKAKFNRSSSVGPGMTTNPLNPTDRSRRALYESLPF 61
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50821.12336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G798_ECTSI5.430e-1267.92MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZG82_9STRA1.700e-1058.93Solute carrier family facilitated glucose transpor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50821contigH-elongata_contig50821:1672..1884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50821.12336.1mRNA_H-elongata_contig50821.12336.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50821 1541..1884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50821.12336.1 ID=prot_H-elongata_contig50821.12336.1|Name=mRNA_H-elongata_contig50821.12336.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MPSTEADPLMTPPRYGSAMSTPNINHANEEGDHAAKFNRSSSVGPGMTAS
TLNPVQSNRRTLYLNLPFFR*
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