prot_H-elongata_contig50520.12297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50520.12297.1
Unique Nameprot_H-elongata_contig50520.12297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A6H5KKG8_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG8_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 9.710e-37
Identity = 88/209 (42.11%), Postives = 116/209 (55.50%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCA-CIEAAVMKR-ILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRG 207
            MM+ IV V   FGL VSE KT  M M P  ++     V A GQ Y Q D FVYLG TIS  G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W L+   + KL   HR  L RC+    S +   D R LSY + L++  C   IEA V KR +L +AG V+R+ D RLP  ++   M GG + RG
Sbjct:  164 MMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEERPFTVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVCKRRLLCFAGFVMRMEDSRLPKRMLLAAMAGGVEYRG 369          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.280e-30
Identity = 85/233 (36.48%), Postives = 118/233 (50.64%), Query Frame = 0
Query:   26 MRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCA-CIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKC----WMRAAQDAPEWYRKVETGAEAFM 253
            M P  ++     V   GQ Y Q D FVYLG TIS       EI  R+  AW C+ + S ++YD        K+R L+A+V+E +L GC +W L+   + KL   +R  L R +    S +   D R LSY + L++  C   IEA V KR L +AG V+R+ D+RLPN ++   M GG   RG        R+ +   AF +  +     W  +A+D   WY KVE GA  FM
Sbjct:    1 MLPKGIEERPFTVSTAGQTYKQTDRFVYLGRTISADRKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLCGCASWSLTAEHYTKLNGTYRQFLTRRIG--WSKRKRSD-RPLSYAQALIQAGCEEIIEATVHKRRLCFAGFVMRMEDNRLPNRMLLEAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGAAWFM 230          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A7D9M5G6_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5G6_PARCT)

HSP 1 Score: 124 bits (311), Expect = 1.680e-28
Identity = 81/263 (30.80%), Postives = 127/263 (48.29%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAEAFMSASSTKRVNE 263
            +M +       F L +S  KT  +   PP +  +  ++   GQ+     TF YLGSTIS    +  EI+RR   A + F +    V+ +  I +  K+   KA V+  +LYG  TW L      KL EA +   LR +      + TP      + EVL R  C  +E+ + KR L +AG +VR+ D+RLP I++ GE+  G +  G+P KR K  +     +  +  + W   A+D   W   + TG ++F  A  T+R+ +
Sbjct:  415 LMDSFANASRRFDLTISIKKTEVLCQPPPGVLLDKPSIIVNGQKLKTTKTFPYLGSTISDDAQLDHEIERRIAKASSSFERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTP------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTGVQSFE-AGRTERIRQ 669          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A6S7K883_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K883_PARCT)

HSP 1 Score: 122 bits (305), Expect = 1.780e-28
Identity = 80/263 (30.42%), Postives = 126/263 (47.91%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAEAFMSASSTKRVNE 263
            +M +       F L +S  KT  +   PP +  +  ++   GQ+     TF YLGSTIS    +  EI+RR   A + F +    V+ +  I +  K+   K  V+  +LYG  TW L      KL EA +   LR +      + TP      + EVL R  C  +E+ + KR L +AG +VR+ D+RLP I++ GE+  G +  G+P KR K  +     +  +  + W   A+D   W   + TG ++F  A  T+R+ +
Sbjct:  129 LMDSFTNASRRFDLTISIKKTEVLCQPPPGVLLDKPSIIVNGQKLKTTKTFPYLGSTISNDEQLHHEIERRIAKASSSFGRLKDRVWKSHDIKLETKIALFKVVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTP------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTGVQSFE-AGRTERIRQ 383          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A6S7JKI9_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JKI9_PARCT)

HSP 1 Score: 119 bits (298), Expect = 2.570e-28
Identity = 77/248 (31.05%), Postives = 118/248 (47.58%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETG 248
            +M +       F L +S  KT  +   PP +  +  ++   GQ+     TF YLGSTIS    +  EI+RR   A + F +    V+ +  I +  K+   KA V+  +LYG  TW L      KL EA +   LR +      + TP      + EVL R  C  +E+ + KR L +AG +VR+ D+RLP I++ GE+  G +  G+P KR K  +     +  +  + W   A+D   W   + TG
Sbjct:   62 LMDSFANASRRFDLTISIKKTEVLCQPPPGVLLDKPSIIVNGQKLKTTKTFPYLGSTISDDAQLDHEIERRIAKASSSFERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTP------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTG 302          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: UPI001CF59A58 (uncharacterized protein LOC122965242 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF59A58)

HSP 1 Score: 122 bits (305), Expect = 3.790e-28
Identity = 80/242 (33.06%), Postives = 113/242 (46.69%), Query Frame = 0
Query:    9 CAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAE 250
            C AFGL +S  KT  M    P        +     R    DTFVYLGSTISR G++  EI  RT      F K  + V+ +  I +  K+      +L  +LY    W        +L   H+  L R LN    +  TPD  +L   E      C  IE+ +MK  L +AG VVR+ D+R+P  +  GE++ GK+ + +P KR K  +     AF I  + W   A+   EW + ++ GAE
Sbjct:  116 CDAFGLTISIKKTKVMFTPVPGAPYVEPDIFVKKTRLEVVDTFVYLGSTISRDGSLDAEINLRTQKTGTAFGKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLERFHQKCLRRILNIKWQS-LTPDTAVLQIAE------CPSIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRPQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEWRQLLKRGAE 350          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: UPI001CF21395 (uncharacterized protein LOC122952729 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF21395)

HSP 1 Score: 122 bits (305), Expect = 5.460e-28
Identity = 82/250 (32.80%), Postives = 116/250 (46.40%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAE 250
            +M      C AFGL +S  KT  M    P        +     R    DTFVYLGSTISR G++  EI  RT  A   F K  + V+ +  I +  K+      +L  +LY    W        +L   H+  L R LN    +  TPD  +L   E      C  IE+ +MK  L +AG VVR+ D+R+P  +  GE++ GK+ + +P KR K  +     AF I  + W   A+   EW + ++ GAE
Sbjct:  161 IMNLFSRACDAFGLTISIKKTKVMFTPVPGAPYVEPDIFVKKTRLEFVDTFVYLGSTISRDGSLDAEINLRTQKASIAFRKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLETFHQKCLRRILNIKWQS-LTPDTGVLQIAE------CPSIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRPQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEWRQLLKRGAE 403          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A8C5PP25_9ANUR (Reverse transcriptase domain-containing protein n=10 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PP25_9ANUR)

HSP 1 Score: 121 bits (304), Expect = 1.660e-27
Identity = 77/246 (31.30%), Postives = 117/246 (47.56%), Query Frame = 0
Query:    7 EVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAEAF 252
            + C  FGL ++  KT  M    P       ++   GQR +  D F YLGS +SR   +  E+  R   A   F +  + V+D   I    K++  +A VL  +L+GC TW +      KL   H   L + L      +  PD       EVL+R D   I   + +  L +AG V R+ D+RLP +++ GE+  GK+ +G   KR K  +     AF I+P  W  AAQD  +W   ++ GA+++
Sbjct:  673 DACNNFGLTINRKKTEVMYQPAPRKPYAEPSITISGQRLNAVDKFTYLGSILSRSVVMDDELIARLAKANAAFGRLRKNVWDRRGIRQKTKIKVYRAAVLSTLLHGCETWTIYQRHAKKLNHFHTTSLRKLLGIKWQDKV-PD------TEVLVRADLPSIFTILAQSQLRWAGHVARMKDNRLPKMLLFGELTQGKRSQGGQKKRYKDTLKAALKAFNINPINWELAAQDKIKWRSAIKNGAQSY 911          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: UPI00077B22FF (uncharacterized protein LOC107355912 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B22FF)

HSP 1 Score: 120 bits (302), Expect = 2.350e-27
Identity = 80/243 (32.92%), Postives = 116/243 (47.74%), Query Frame = 0
Query:    9 CAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRML-SYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAE 250
            C AFGL +S  KT  M    P        +     R    DTFVYLGSTISR G++  EI  RT  +   F K  + V+ +  I +  K+      +L  +LY    W        +L+  H+  L R LN          +R L S   VL   +C  IE+ +MK  L +AG VVR+ D+R+P  +  GE++ GK+++ +P KR K  +     AF I  + W   A+   EW + ++ GAE
Sbjct:  294 CDAFGLTISIKKTKVMFTPVPGAPYVEPDIFVKKTRLEVVDTFVYLGSTISRDGSLDAEINLRTQKSSAAFRKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLKRFHQKCLRRILNI--------KWRSLTSDTAVLQIAECPTIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRQQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEWRQLLKRGAE 528          
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Match: A0A6S7JBE9_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JBE9_PARCT)

HSP 1 Score: 105 bits (261), Expect = 3.160e-22
Identity = 70/212 (33.02%), Postives = 104/212 (49.06%), Query Frame = 0
Query:    1 MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDTFVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDYRMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMVGGKKKRGQPAKR 212
            +M +       F L +S  KT  +   PP +  +  ++   GQ+     TF YLGSTIS    +  EI+RR   A + F +    V+ +  I +  K+   KA V+  +LYG  TW L      KL E  +   LR +      + TP      + EVL R  C  IE+ + KR L +AG +VR+ D+RLP I++ GE+  G +  G+P KR
Sbjct:  145 LMDSFANASRRFDLTISIKKTEVLCQPPPGVLLDKPSIIVNGQKLKTTKTFPYLGSTISDDAQLDHEIERRIAKASSSFGRLKDRVWKSHDIKLETKIGLFKAVVISTLLYGGETWTLYARHIKKL-EVFQQRSLRSIMRVNWEEKTP------HSEVLERAKCCSIESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKR 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50520.12297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KKG8_9PHAE9.710e-3742.11Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JGW6_9PHAE7.280e-3036.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7D9M5G6_PARCT1.680e-2830.80RNA-directed DNA polymerase from mobile element jo... [more]
A0A6S7K883_PARCT1.780e-2830.42RNA-directed DNA polymerase from mobile element jo... [more]
A0A6S7JKI9_PARCT2.570e-2831.05Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
UPI001CF59A583.790e-2833.06uncharacterized protein LOC122965242 n=1 Tax=Acrop... [more]
UPI001CF213955.460e-2832.80uncharacterized protein LOC122952729 n=1 Tax=Acrop... [more]
A0A8C5PP25_9ANUR1.660e-2731.30Reverse transcriptase domain-containing protein n=... [more]
UPI00077B22FF2.350e-2732.92uncharacterized protein LOC107355912 n=1 Tax=Acrop... [more]
A0A6S7JBE9_PARCT3.160e-2233.02Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 5..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50520contigH-elongata_contig50520:11..817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50520.12297.1mRNA_H-elongata_contig50520.12297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50520 2..817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50520.12297.1 ID=prot_H-elongata_contig50520.12297.1|Name=mRNA_H-elongata_contig50520.12297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
MMTAIVEVCAAFGLKVSENKTMTMNMRPPTMKAEAVAVEAVGQRYSQFDT
FVYLGSTISRVGNIGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRF
LKAKVLEVMLYGCVTWILSPGDFDKLREAHRGMLLRCLNAYTSTQATPDY
RMLSYLEVLLRTDCACIEAAVMKRILHYAGRVVRIHDDRLPNIVMRGEMV
GGKKKRGQPAKRLKRRVMKYCTAFGIDPKCWMRAAQDAPEWYRKVETGAE
AFMSASSTKRVNETNARYA
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