prot_H-elongata_contig50415.12275.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50415.12275.1
Unique Nameprot_H-elongata_contig50415.12275.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length248
Homology
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: A0A2S2P6A6_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P6A6_SCHGA)

HSP 1 Score: 81.3 bits (199), Expect = 5.740e-14
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0
Query:  148 PVSPRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            P + R    NE + Y    V E T+ +   PL WW++N   YP+I++LA+KYL + ++S  SER FS AG ++TAKRN ++G+TA  +IFL  + K
Sbjct:  410 PDNERCSEQNELDKY----VKENTINKNACPLAWWKENSSRYPNISKLAKKYLCIPSTSTPSERAFSTAGNIITAKRNCLSGETAKWLIFLSHNTK 501          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: A0A6G0VRT1_APHCR (Dimer_Tnp_hAT domain-containing protein (Fragment) n=2 Tax=Aphidinae TaxID=133076 RepID=A0A6G0VRT1_APHCR)

HSP 1 Score: 80.9 bits (198), Expect = 7.980e-14
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  148 PVSPRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLKHK 245
            P + R    NE + Y    V E T+ +   PL WW++N   YP+I +LA+KYL + ++S  SER FS AG ++TAKRN ++G+TA  +IFL  + K +
Sbjct:  427 PDNERCSEQNELDKY----VKENTINKNACPLAWWKENSSRYPNILKLAKKYLCIPSTSTPSERAFSTAGNIITAKRNCLSGETAKWLIFLSHNTKQQ 520          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: A0A8M1KFB0_CLUHA (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KFB0_CLUHA)

HSP 1 Score: 80.5 bits (197), Expect = 1.180e-13
Identity = 67/218 (30.73%), Postives = 107/218 (49.08%), Query Frame = 0
Query:   32 RMASVLDPRTKSLAWAYTEDIESDFYGPIVIE---LDAMIQLEEKEAL----AVASTAEDDASPPPPEKVNRVGASAAQTEGGSMTRHRDGFSLSSLIQKAAARKRLENADEMASPAANVQKAPVSPRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESL 242
            R AS LDPR K L +   EDI  D +G +V E   L+  +++EE E+         T E + S  PP++  RV  S                         A    LEN      P A  Q+ P+S       E   ++GA  +  +      PL WWR+N+++YP +++L ++Y  + A+S ++ER+FS AG +VTA+R+ +T +    ++FLH++L
Sbjct:  438 RSASALDPRFKGLPFLSEEDIV-DTFGRVVAEAASLEQQVRVEEDESQHNTEGTHPTEEQNQSSSPPKR--RVAPS---------------LQFPXXXXXXAPSSLLENLLGNTFPIATAQQ-PISAYAKAEEEVTKFRGAPPIPLSED----PLSWWRKNDVMYPLLSKLGKRYFCIPATSVSAERVFSTAGDIVTAQRSTLTPEHVDQLLFLHKNL 632          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: UPI0015F8C7E4 (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015F8C7E4)

HSP 1 Score: 75.5 bits (184), Expect = 3.320e-13
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  155 IMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            I  E  +YK A     ++   G PL WW+ NE  YPHIA +AR YLAV  +S  SER+FS AG +VTAKR+ ++ D    +IFL  +LK
Sbjct:   90 IKEEVASYKAAS----SIPVGGEPLAWWKNNECKYPHIAMMARCYLAVPGTSDPSERVFSTAGDIVTAKRSTLSPDNVGILIFLKMNLK 174          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: UPI0020143E0A (zinc finger BED domain-containing protein 4-like n=4 Tax=Euteleostomi TaxID=117571 RepID=UPI0020143E0A)

HSP 1 Score: 78.2 bits (191), Expect = 3.480e-13
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  150 SPRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            +P  +I  E  +Y  A  +  TV   G PL WW+ NE  YPHIA++AR YLAV  SS  SER+FS AG +VTAKR+ ++ D    ++FL ++LK
Sbjct:  247 TPADIIKEEVASYLAASGI--TVD--GDPLTWWKSNECKYPHIAKMARCYLAVPGSSVPSERVFSTAGDIVTAKRSTLSPDNVDILVFLKKNLK 336          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: A0A8C2FYL1_CYPCA (BED-type domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2FYL1_CYPCA)

HSP 1 Score: 79.0 bits (193), Expect = 3.960e-13
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 0
Query:  154 VIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            V+ +E + YK A+V+         PL WW+ NE  YPH+++LA++YLAVQA+S ASER+FS AG +VTA+R  ++ +    +IFL +++K
Sbjct:  547 VVKDEIQLYKMAKVISVD----SNPLKWWKDNEHQYPHLSKLAKRYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFLKKNMK 632          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: UPI001C59CA0C (zinc finger BED domain-containing protein 4-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C59CA0C)

HSP 1 Score: 77.8 bits (190), Expect = 4.020e-13
Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 0
Query:  154 VIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            V+ +E + YK A+V+         PL WW+ NE  YPH+++LA+ YLAVQA+S ASER+FS AG +VTA+R  ++ +    +IFL +++K
Sbjct:  231 VVKDEIQLYKMAKVISVD----SNPLKWWKDNEHQYPHLSKLAKHYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFLKKNMK 316          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: J9KFH3_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KFH3_ACYPI)

HSP 1 Score: 78.6 bits (192), Expect = 4.950e-13
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 0
Query:  148 PVSPRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            P + R    NE + Y    V E T+ +   PL WW++N   Y +I++LA+KYL + ++S  SER FS AG ++TAKRN ++G+TA  +IFL  + K
Sbjct:  435 PDNERCSEQNELDKY----VKENTINKNACPLAWWKENSSRYSNISKLAKKYLCIPSTSTPSERAFSNAGNIITAKRNCLSGETAKWLIFLSHNTK 526          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: UPI0011B655F8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B655F8)

HSP 1 Score: 75.1 bits (183), Expect = 1.360e-12
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0
Query:  178 PLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLK 243
            PL WWR NE  YPHIA+LAR+YLAV  +S  SER+FS AG +V A R+R++ +    +IFL ++++
Sbjct:  167 PLAWWRSNEHKYPHIAKLARRYLAVPGTSVPSERVFSTAGDIVHASRSRLSAENVDKLIFLQKNMR 232          
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Match: A0A1A7XRV2_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XRV2_9TELE)

HSP 1 Score: 73.9 bits (180), Expect = 1.520e-12
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 0
Query:  178 PLGWWRQNEMLYPHIARLARKYLAVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESL 242
            PL WWR NE  YP +ARLA++YL V  +S ASER+FS AG +VTAKR+ ++ D   +++FLH++L
Sbjct:  116 PLTWWRSNEREYPLLARLAKQYLCVPGTSIASERVFSTAGDIVTAKRSCLSPDHVNELLFLHKNL 180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50415.12275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2S2P6A6_SCHGA5.740e-1442.71Zinc finger BED domain-containing protein 1 (Fragm... [more]
A0A6G0VRT1_APHCR7.980e-1441.84Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A8M1KFB0_CLUHA1.180e-1330.73E3 SUMO-protein ligase ZBED1-like n=1 Tax=Clupea h... [more]
UPI0015F8C7E43.320e-1347.19zinc finger BED domain-containing protein DAYSLEEP... [more]
UPI0020143E0A3.480e-1346.81zinc finger BED domain-containing protein 4-like n... [more]
A0A8C2FYL1_CYPCA3.960e-1344.44BED-type domain-containing protein n=1 Tax=Cyprinu... [more]
UPI001C59CA0C4.020e-1344.44zinc finger BED domain-containing protein 4-like n... [more]
J9KFH3_ACYPI4.950e-1341.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac... [more]
UPI0011B655F81.360e-1251.52zinc finger BED domain-containing protein 1-like n... [more]
A0A1A7XRV2_9TELE1.520e-1253.85Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 164..240
e-value: 1.6E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 170..240
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 33..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50415contigH-elongata_contig50415:286..1297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50415.12275.1mRNA_H-elongata_contig50415.12275.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50415 97..1672 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50415.12275.1 ID=prot_H-elongata_contig50415.12275.1|Name=mRNA_H-elongata_contig50415.12275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
METDMYKRFHPGDAIRVDRAPINTNNPLRIPRMASVLDPRTKSLAWAYTE
DIESDFYGPIVIELDAMIQLEEKEALAVASTAEDDASPPPPEKVNRVGAS
AAQTEGGSMTRHRDGFSLSSLIQKAAARKRLENADEMASPAANVQKAPVS
PRVVIMNEWEAYKGAEVMEETVQRLGGPLGWWRQNEMLYPHIARLARKYL
AVQASSAASERLFSQAGLVVTAKRNRMTGDTAADIIFLHESLKHKLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf