prot_H-elongata_contig50307.12263.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50307.12263.1
Unique Nameprot_H-elongata_contig50307.12263.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
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BLAST of mRNA_H-elongata_contig50307.12263.1 vs. uniprot
Match: D7G5T1_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 3.520e-50
Identity = 107/205 (52.20%), Postives = 129/205 (62.93%), Query Frame = 0 
Query:    1 MEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGLRLLLLVLSSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREVFQGIKRLASSLYFSVHPEV-------VSMECLTATAAATMKTNPNWKDIRYEPQHHSIARD-----GLLGQ-----AAVVPEPGQRSNAK-------TAKAASGIISPSSR 181
            +EAYTR + RRCL M GR  SD+GVA LLA A+E NIS E+RSGLR+L  VLS+RLGA + TGRAVP  SQ LA+RH +LK+WS SR+  LR+ FQG+KRL  SL+FS HPEV             +  A A +KTNPNW DIRY+PQHH  ARD        GQ     AA    PG  S AK       TA+AA+ + S + R
Sbjct:  103 VEAYTRTLVRRCLAMYGRSGSDVGVAVLLAQAFEINISEEERSGLRVLFRVLSTRLGAFVLTGRAVPFQSQSLAARHGVLKRWSVSRIRPLRDAFQGVKRLTCSLFFSAHPEVHHKPSHPEGSGAESTAALAKIKTNPNWIDIRYDPQHHRFARDETPAVSSAGQRPDPIAAAAVRPGLWSGAKVKDRVSQTARAAAAVASTAPR 307
[Close]
BLAST of mRNA_H-elongata_contig50307.12263.1 vs. uniprot
Match: A0A6H5JQQ5_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ5_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 4.650e-48
Identity = 98/179 (54.75%), Postives = 118/179 (65.92%), Query Frame = 0 
Query:    1 MEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGLRLLLLVLSSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREVFQGIKRLASSLYFSVHPEV-------VSMECLTATAAATMKTNPNWKDIRYEPQHHSIARDGLLGQAAVVPEPGQRSNAKTAKAA 172
            +EAYTR + RRCL M GR  SD+GVA LLA A+E NIS E+R GLR+L  +LS+RLGA I TGRAVP  SQ LA+RH +LK+WS SR+  LR+ FQG+KRL  SL+FS HPEV                A A +KTNPNW DIRY+PQHH  AR+ +     V+   GQR N   A AA
Sbjct:  195 VEAYTRTLVRRCLAMHGRSGSDVGVAILLAQAFEINISEEERLGLRVLFRMLSTRLGAFILTGRAVPFHSQSLAARHGVLKRWSVSRIRPLRDAFQGVKRLTCSLFFSAHPEVHRKPSHPEESGAEWTAALAKIKTNPNWIDIRYDPQHHRFARNEI----PVLSSTGQRLNPIGAAAA 369
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50307.12263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5T1_ECTSI3.520e-5052.20Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JQQ5_9PHAE4.650e-4854.754Fe-4S ferredoxin-type domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46056FAMILY NOT NAMEDcoord: 18..147
NoneNo IPR availablePANTHERPTHR46056:SF4LONG-CHAIN-ALCOHOL OXIDASEcoord: 18..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50307contigH-elongata_contig50307:2061..4080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50307.12263.1mRNA_H-elongata_contig50307.12263.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50307 2061..4080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50307.12263.1 ID=prot_H-elongata_contig50307.12263.1|Name=mRNA_H-elongata_contig50307.12263.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGLRLLLL
VLSSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREVFQGIKR
LASSLYFSVHPEVVSMECLTATAAATMKTNPNWKDIRYEPQHHSIARDGL
LGQAAVVPEPGQRSNAKTAKAASGIISPSSREPNCPADSSPTCASAAGP
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