prot_H-elongata_contig50245.12253.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50245.12253.1
Unique Nameprot_H-elongata_contig50245.12253.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig50245.12253.1 vs. uniprot
Match: D7FWJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ7_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 5.410e-19
Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 0 
Query:    4 EEEPSYESATRDVLLTSAKLIGSSCVDVNLAFSKCKAQDSAPEACLKLGGEVLSCTN 60
            EE+  + SATRDVL+++AKL+GSSCVD NLAF+KCKA++S PEAC+KLG  VL CT+
Sbjct:    3 EEDMPFPSATRDVLISTAKLLGSSCVDENLAFTKCKAENSDPEACMKLGVAVLECTS 59
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50245.12253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWJ7_ECTSI5.410e-1966.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50245contigH-elongata_contig50245:1261..1810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50245.12253.1mRNA_H-elongata_contig50245.12253.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50245 1261..1810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50245.12253.1 ID=prot_H-elongata_contig50245.12253.1|Name=mRNA_H-elongata_contig50245.12253.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MAVEEEPSYESATRDVLLTSAKLIGSSCVDVNLAFSKCKAQDSAPEACLK
LGGEVLSCTNAV*
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