prot_H-elongata_contig50092.12234.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50092.12234.1
Unique Nameprot_H-elongata_contig50092.12234.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 0
Query:   11 IFQVLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            + QVLR GTLSDKVAALTLQVQESP+HRL VL+GLLDLGLKKER
Sbjct:  264 VAQVLRGGTLSDKVAALTLQVQESPVHRLAVLDGLLDLGLKKER 307          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A6H5L5C9_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C9_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.770e-15
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
Query:   14 VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            VLR GTLSDKVAALTLQVQESP+HRL VL+GLLDLGLKKER
Sbjct:   56 VLRGGTLSDKVAALTLQVQESPVHRLAVLDGLLDLGLKKER 96          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A7S2GVG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVG6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.320e-8
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   13 QVLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLK 51
            Q+LRSGTL+D++AA+TL+VQ+SP+H L  L+GLL LG K
Sbjct:   74 QMLRSGTLADRIAAMTLRVQQSPLHELSSLDGLLKLGQK 112          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A7S4ECK5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECK5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.080e-7
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:   13 QVLRSGTLSDKVAALTLQVQESPIHRLGVLEGLL 46
            QVLRSGT++DKVAA+TL VQESPIHRL  L+ LL
Sbjct:   78 QVLRSGTMADKVAAMTLMVQESPIHRLETLDSLL 111          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A179I8D9_CORDF (CBF domain-containing protein n=2 Tax=Cordyceps confragosa TaxID=2714763 RepID=A0A179I8D9_CORDF)

HSP 1 Score: 55.1 bits (131), Expect = 2.080e-7
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 TSIFHFARFRIFQ-VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            TS+F  A  +    ++ SGTL+DKV+ALTL +QESP+H L   +GL++L  KK R
Sbjct:  225 TSVFASASHKFLSTIMTSGTLTDKVSALTLAIQESPVHNLRAFDGLMNLASKKSR 279          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A0D1YZ12_9EURO (CBF domain-containing protein n=1 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1YZ12_9EURO)

HSP 1 Score: 54.7 bits (130), Expect = 2.850e-7
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   14 VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            V+ SGTLSDKV+ALTL VQESPIH +  LE L+ L  KK R
Sbjct:  299 VITSGTLSDKVSALTLAVQESPIHNMRALESLMALARKKSR 339          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A2T3ACI5_9PEZI (CBF/Mak21 family-domain-containing protein n=1 Tax=Coniella lustricola TaxID=2025994 RepID=A0A2T3ACI5_9PEZI)

HSP 1 Score: 54.7 bits (130), Expect = 2.850e-7
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   14 VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            ++ SGT+SDKV+ALTL VQESP+H +  LE L++L  KK R
Sbjct:  291 IMSSGTMSDKVSALTLAVQESPVHNIKTLESLMNLAAKKSR 331          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.860e-7
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   13 QVLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            QVL+SGTLSDK++ALT++ +ESP+HRL  L+ L++L  K +R
Sbjct:  238 QVLKSGTLSDKISALTMRCKESPVHRLADLDKLVELATKHDR 279          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A0N1H227_9EURO (CBF domain-containing protein n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1H227_9EURO)

HSP 1 Score: 54.3 bits (129), Expect = 3.900e-7
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   14 VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            V++SGTLSDK++ALTL VQESPIH +  LE LL L  K+ R
Sbjct:  261 VIQSGTLSDKISALTLAVQESPIHNMKALETLLGLASKRSR 301          
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Match: A0A1S7UI36_ROSNE (Putative ribosome biogenesis protein MAK21 n=1 Tax=Rosellinia necatrix TaxID=77044 RepID=A0A1S7UI36_ROSNE)

HSP 1 Score: 54.3 bits (129), Expect = 3.900e-7
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   14 VLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGLKKER 54
            ++ SGT+SDKV+ALTL VQESP+H +   E LL LG K+ R
Sbjct:  328 IMSSGTMSDKVSALTLAVQESPVHNIKAFENLLGLGAKRSR 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50092.12234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPZ6_ECTSI1.500e-1586.36CBF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5C9_9PHAE9.770e-1590.24Reverse transcriptase domain-containing protein n=... [more]
A0A7S2GVG6_9STRA5.320e-864.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4ECK5_9STRA2.080e-776.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A179I8D9_CORDF2.080e-749.09CBF domain-containing protein n=2 Tax=Cordyceps co... [more]
A0A0D1YZ12_9EURO2.850e-765.85CBF domain-containing protein n=1 Tax=Exophiala si... [more]
A0A2T3ACI5_9PEZI2.850e-758.54CBF/Mak21 family-domain-containing protein n=1 Tax... [more]
A0A835ZC94_9STRA2.860e-757.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0N1H227_9EURO3.900e-763.41CBF domain-containing protein n=1 Tax=Phialophora ... [more]
A0A1S7UI36_ROSNE3.900e-758.54Putative ribosome biogenesis protein MAK21 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50092contigH-elongata_contig50092:3324..3485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50092.12234.1mRNA_H-elongata_contig50092.12234.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50092 3324..3485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50092.12234.1 ID=prot_H-elongata_contig50092.12234.1|Name=mRNA_H-elongata_contig50092.12234.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
TSIFHFARFRIFQVLRSGTLSDKVAALTLQVQESPIHRLGVLEGLLDLGL
KKER
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