prot_H-elongata_contig5007.12231.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5007.12231.1
Unique Nameprot_H-elongata_contig5007.12231.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: D7FXJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ2_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 8.800e-102
Identity = 174/347 (50.14%), Postives = 217/347 (62.54%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGES--GGDGTEK--------RGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGR--LVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGT-LEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPD-----------SLRKLLESSGAKFVVKESDSGREEGEGRGSAGFVQSML 323
            M+D ELRLFARRHAFAGYTRV+  + P  DG S   G G E+         G VATRHH IDWNYVG+ R RPNKWRVEM PGGD WKEWGFA+D FDQHVYMERW+RLPGG GPYFALRRRPS    SAPD+L++VCGDHFGLI+DR   +++  GG+ RGG+  LV  VDD +ARG RR A+EL+SLEASHGR+   +   PWT++CSLHPWL+ RRPFLG+V+TI  D  +   + + +A  ++    R +                     W G  L+G WDVVEST+    P            + R L   SGA+ ++   ++ R++  G  S     S L
Sbjct:  165 MTDFELRLFARRHAFAGYTRVEPVASPWVDGASLRRGGGEEQGAKEHGRLEGSVATRHHCIDWNYVGEARPRPNKWRVEMGPGGDVWKEWGFAKDAFDQHVYMERWERLPGGRGPYFALRRRPS----SAPDALLVVCGDHFGLIVDRDSGLMEA-GGSSRGGKGGLVGRVDDAIARGDRRRALELLSLEASHGRVSAQKGRLPWTVNCSLHPWLENRRPFLGSVLTIAPDSLSADWVGVKSAGGSDDGVPRHLG--------------------WNGARLDGTWDVVESTMSLPPPSRSPSSRGLPHVAFRALFAESGAEVLMGGGETPRKDEGGTCSLRAKLSQL 486          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A835YWZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 9.930e-57
Identity = 104/204 (50.98%), Postives = 125/204 (61.27%), Query Frame = 0
Query:    5 ELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVE---MEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKG 205
            +LRL+ARRHAFAG TRVQ+    P               VATRHHA+DWN+VG+ R RPNKWR+E     P  D WKEWGFA+D+  QH+YMERW+R+ GG GPY ALRRRP AS     D+ +IVCGDHFG + DR+      RG   R   LV++VD  V RG R  A   + L+A HG  R   +   W ID SL PWL G
Sbjct:  115 QLRLYARRHAFAGITRVQSIDGAP---------------VATRHHAVDWNFVGRMRPRPNKWRIEARQQRPRCDVWKEWGFARDEHGQHIYMERWERVKGGTGPYLALRRRPEASG-GGRDAFLIVCGDHFGYVEDRA---AAARGDWGRYASLVEVVDAAVKRGDRGAAEAYLDLKACHGMRR---EGGAWVIDYSLQPWLVG 296          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: L1JSR4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JSR4_GUITC)

HSP 1 Score: 194 bits (492), Expect = 1.100e-55
Identity = 97/207 (46.86%), Postives = 129/207 (62.32%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 207
            +SD++LRL ARRH FAGY+ +            GG  T +   V TRHHAIDWN+VG+ R RPNKWR+EM   G  WKEWG+A+D+FDQH+Y+ERW+ LP G GPY AL R          ++++IVCGDHF   +DR  ++        +   L DLVD  V +G R EA++ +SLE  HGRI G +    W ID +LHPW+ G++
Sbjct:  121 LSDVDLRLLARRHCFAGYSLLN----------QGGPWTIENPPVCTRHHAIDWNFVGKMRPRPNKWRIEMREDGKVWKEWGYARDEFDQHIYLERWELLPEGKGPYLALTR----DERYGREAILIVCGDHFNFAMDRPTKMPFDPQ-RQQVASLQDLVDSLVDKGDREEAIKYLSLEGCHGRISGKQ---AWVIDNALHPWMIGKK 309          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S0E054_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E054_9CRYP)

HSP 1 Score: 186 bits (472), Expect = 1.080e-52
Identity = 93/207 (44.93%), Postives = 124/207 (59.90%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 207
            +SD +LRL ARRH FAGY+ +             G  T +   V TRHH+IDWN+VG+ R RPNKWR+EM   G  WKEWG+A+D+FDQH+Y+ERW+ LP G G Y A+RR          D+++IVCG+HF  ++DR  ++            L DLVD  V  G R EA++ +SLE  HGR+ G      W +D +LHPW  G+R
Sbjct:  124 LSDDDLRLLARRHCFAGYSLLNE-----------GPWTSQNPPVCTRHHSIDWNFVGKMRPRPNKWRIEMREDGKVWKEWGYAKDEFDQHIYLERWELLPEGKGRYLAIRR----DERYGRDAILIVCGNHFNFVMDRPTKMPFDPERQSHAS-LQDLVDKLVQEGNREEAMKYLSLEGCHGRVSG---ANAWVVDNALHPWKIGKR 311          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S2US64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US64_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.890e-49
Identity = 100/231 (43.29%), Postives = 132/231 (57.14%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGG-DTWKEWGFAQDDFDQHVYMERWQRLPG---GGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEI 227
            + D+ LRL+AR+HAF GYT +        D E  G+G      V TRHH IDWN+VG PR RPNKW VE +P   D+WKEW +A DDF QH Y E+W RL G   G G   ALR+   A+   A D +++V GDHF  +  R+L  ++ R  A   G LV L+D  V+ G R+ A   +S+EASHGR+        W +D S+ PW +G + F G  I +  D  NG L +
Sbjct:   61 LDDIGLRLYARQHAFGGYTVM--------DYEGPGNGRP----VCTRHHCIDWNFVGVPRPRPNKWWVEFKPSTRDSWKEWAYATDDFGQHYYCEQWDRLDGDSSGSGVVVALRK---AAGAGACDGILVVVGDHFNFLSGRALLGIENRYNA---GSLVQLIDAAVSVGDRKTAESFLSIEASHGRVSS-----GWMVDASVQPWREGTKLFSGAAIEVDVDP-NGALSV 267          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S0F6Z1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6Z1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.650e-45
Identity = 108/282 (38.30%), Postives = 141/282 (50.00%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGG-PYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVK-GRGGA--DRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVEST 278
            +S  +LR+ +R+H FAGYT++Q               TEK  LV TRHH IDWNYVG  R RPNKW VEM   G  WKE  +A DD  QH YMERWQR   G   P  ALR+R      +  D ++++CGDHF  + DR   V + GR  A       LVD+VD  + RG    A   +S+   HGRI        W IDC+ HPWL+GR  +  + + ++  +G            + PT   M L  +   AE G G       W G     VW+V +S+
Sbjct:  138 LSTQQLRILSRQHVFAGYTKMQ---------------TEKGRLVCTRHHCIDWNYVGVARNRPNKWWVEMRSDGHVWKEMSYATDDHRQHYYMERWQRRQEGSAVPRLALRKRRG----NGRDGVVVICGDHFNYVFDRHWPVDEDGRQQAAGSHCATLVDMVDYLLERGKVDVARSYLSVNGGHGRIS-----QGWMIDCATHPWLEGRALWKKSSVAVVAGDGR-----------QPPTPTHM-LNGSGAEAE-GTGSSTFHLTWDGD----VWEVHDSS 378          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A8J5XXE1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXE1_DIALT)

HSP 1 Score: 154 bits (390), Expect = 2.950e-40
Identity = 109/309 (35.28%), Postives = 137/309 (44.34%), Query Frame = 0
Query:    5 ELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGG----------------DTWKEWGFAQDDFDQHVYMERWQRLPG---GGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRS----LEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPDSLRKL 290
            ELRL AR+H F GYT +   + P A             LV TRHHAIDWN+VG PR RPNKWRVEM P G                  WKEW FA DD  Q  YMERW R+ G   G GP  ALR      S S PD  I++ GDHF     R+    L   +  G A     LV++VD  VARG    A   + L   HGR+        W ID   HPWL+G +     ++     +G+   E+ A                  +   Q + H  D    IG      W++++ T + G+ D L  L
Sbjct:  133 ELRLLARQHVFCGYT-LPVSAAPGAP------------LVCTRHHAIDWNFVGVPRARPNKWRVEMPPPGLRLGPSTAQGASGAAAAAWKEWSFALDDAGQSYYMERWARVDGDGDGAGPTLALR------SCSQPDEFIVLVGDHFAFARARAGCPLLPPARADGAAPPPASLVEMVDGAVARGDLATARSWLGLAGGHGRVSA-----GWRIDLCTHPWLEGTQLLRSDMVAGAIVDGHAAGEVHA------------------DLRAQALVHGADNVVVIG---GRPWELLDRTGLRGAEDVLHVL 396          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S2X7A1_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7A1_9EUKA)

HSP 1 Score: 152 bits (385), Expect = 8.990e-40
Identity = 91/233 (39.06%), Postives = 124/233 (53.22%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQ-PRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASS 232
            +S  ELR  AR+H FAGY+ V            GG G+     V TRHHA+DWNY    PR RPN+WR+E+ P G+++KE+  A D+  Q VYMERWQ  P G GPY ALRR    ++    +SL+IV G+HF    DR    +    GA +GG    LVD     G R +  +++ LE S+G +  +   P W I  S  PW +G+R        +LT +  G+ E +   S
Sbjct:  125 LSMAELRSLARQHCFAGYSLVNP---------KGGTGSAP---VCTRHHALDWNYHPSFPRARPNRWRIELSPNGESFKEFSVALDEHKQAVYMERWQMYPQGKGPYLALRRMKPQNAVDHRESLLIVVGNHFAFARDRK-HPLPLFSGASKGG-CASLVDAAFRAGDREKMEQMLDLEGSYGCVCDHEGNPTWEIKMSTLPWRQGQR--------LLTPKALGSKEFAKIPS 335          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S3Z9A1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9A1_9EUKA)

HSP 1 Score: 147 bits (372), Expect = 6.920e-38
Identity = 82/208 (39.42%), Postives = 114/208 (54.81%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQ-PRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 207
            +S  ELR  AR+H FAGY+ V            GG G+     V TRHHA+DWNY    PR RPN+WR+E+ P G+++KE+  A D+  Q VYMERW   P G GPY A+R     ++    ++L+IV G+HF    DR    +    G  +GG    LVD     G R +  ++++LE S+GR+  +   P W I  S  PW +G+R
Sbjct:  125 LSMPELRSLARQHCFAGYSLVSP---------KGGTGSSP---VCTRHHALDWNYHPSFPRARPNRWRIELSPNGESFKEFSVALDEHKQAVYMERWAMYPNGKGPYLAMRLVKPENAADHRETLLIVVGNHFAFARDRK-HPLPSFPGVSKGG-CASLVDAAFRAGEREKMEQMLNLEGSYGRVCDHEGNPTWEIKMSTLPWRQGQR 318          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S4ABG2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABG2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 8.110e-36
Identity = 87/242 (35.95%), Postives = 117/242 (48.35%), Query Frame = 0
Query:    1 MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGG-GGPYFALRRRPSA-----------SSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAA 230
            +S  EL+ +AR+H FAG+T V                 EK   VATRHH IDWN+VG  R+RPNKW +E+     +WKE  +A DD  QH Y E+W RL  G   P  ALR  PS            SS    D + ++ GDHF  ++DR+          +    LVDLVDD +A G    A   +S+E  HG +        W +DC++ PW +G+          +   GNG LE+  A
Sbjct:  125 LSPRELQFYARQHIFAGFTVVDH---------------EKERPVATRHHFIDWNFVGISRSRPNKWWIEVNDDISSWKESAYATDDNGQHYYFEQWDRLQNGMPEPRLALRVSPSEKRKSSTEQTEESSRKQQDGVFVLVGDHFNYVMDRTFS--GNENSYNEATSLVDLVDDAIANGDLATARSYLSIEGGHGTVSN-----GWKLDCAIPPWNEGKD---------IACVGNGHLEVVGA 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FXJ2_ECTSI8.800e-10250.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YWZ2_9STRA9.930e-5750.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1JSR4_GUITC1.100e-5546.86Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0E054_9CRYP1.080e-5244.93Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2US64_9STRA1.890e-4943.29Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S0F6Z1_9STRA1.650e-4538.30Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A8J5XXE1_DIALT2.950e-4035.28Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2X7A1_9EUKA8.990e-4039.06Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
A0A7S3Z9A1_9EUKA6.920e-3839.42Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S4ABG2_9STRA8.110e-3635.95Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5007contigH-elongata_contig5007:3551..5997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5007.12231.1mRNA_H-elongata_contig5007.12231.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5007 3380..6900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5007.12231.1 ID=prot_H-elongata_contig5007.12231.1|Name=mRNA_H-elongata_contig5007.12231.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHA
IDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLP
GGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGAD
RGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLH
PWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERA
EQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPDSLRKLLESSGAKFVV
KESDSGREEGEGRGSAGFVQSML*
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