mRNA_H-elongata_contig5007.12231.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5007.12231.1
Unique NamemRNA_H-elongata_contig5007.12231.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: D7FXJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ2_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 1.420e-132
Identity = 215/403 (53.35%), Postives = 267/403 (66.25%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSS-------------QEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGES--GGDGTEK--------RGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGR--LVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGT-LEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPD-----------SLRKLLESSGAKFVVKESDSGREE 1098
            IAGAW+RPLFVGGWTHSDD++             QEGE TFNLQTP++F+D+RVPKA+AALLGHH+ F TM+D ELRLFARRHAFAGYTRV+  + P  DG S   G G E+         G VATRHH IDWNYVG+ R RPNKWRVEM PGGD WKEWGFA+D FDQHVYMERW+RLPGG GPYFALRRRPS    SAPD+L++VCGDHFGLI+DR   +++  GG+ RGG+  LV  VDD +ARG RR A+EL+SLEASHGR+   +   PWT++CSLHPWL+ RRPFLG+V+TI  D  +   + + +A  ++    R +                     W G  L+G WDVVEST+    P            + R L   SGA+ ++   ++ R++
Sbjct:   95 IAGAWKRPLFVGGWTHSDDAAEPASRSSSSPPIGQEGETTFNLQTPSVFIDIRVPKAAAALLGHHRSFHTMTDFELRLFARRHAFAGYTRVEPVASPWVDGASLRRGGGEEQGAKEHGRLEGSVATRHHCIDWNYVGEARPRPNKWRVEMGPGGDVWKEWGFAKDAFDQHVYMERWERLPGGRGPYFALRRRPS----SAPDALLVVCGDHFGLIVDRDSGLMEA-GGSSRGGKGGLVGRVDDAIARGDRRRALELLSLEASHGRVSAQKGRLPWTVNCSLHPWLENRRPFLGSVLTIAPDSLSADWVGVKSAGGSDDGVPRHLG--------------------WNGARLDGTWDVVESTMSLPPPSRSPSSRGLPHVAFRALFAESGAEVLMGGGETPRKD 472          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A835YWZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ2_9STRA)

HSP 1 Score: 246 bits (628), Expect = 5.480e-72
Identity = 133/265 (50.19%), Postives = 161/265 (60.75%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVE---MEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKG 786
            +AG W RPLFVGGW HSD S    E  +NLQTP++FLD+RVP          +G   +S  +LRL+ARRHAFAG TRVQ+    P               VATRHHA+DWN+VG+ R RPNKWR+E     P  D WKEWGFA+D+  QH+YMERW+R+ GG GPY ALRRRP AS     D+ +IVCGDHFG + DR+      RG   R   LV++VD  V RG R  A   + L+A HG  R   +   W ID SL PWL G
Sbjct:   59 VAGVWSRPLFVGGWEHSDASQ---ETVYNLQTPSVFLDMRVP--CGVEFPGARGLRDLSLEQLRLYARRHAFAGITRVQSIDGAP---------------VATRHHAVDWNFVGRMRPRPNKWRIEARQQRPRCDVWKEWGFARDEHGQHIYMERWERVKGGTGPYLALRRRPEASG-GGRDAFLIVCGDHFGYVEDRA---AAARGDWGRYASLVEVVDAAVKRGDRGAAEAYLDLKACHGMRR---EGGAWVIDYSLQPWLVG 296          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: L1JSR4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JSR4_GUITC)

HSP 1 Score: 244 bits (623), Expect = 4.340e-71
Identity = 124/265 (46.79%), Postives = 163/265 (61.51%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHH-QGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 792
            + GAW RPLF+GGW HSD  +   E  +NLQTP+LF+DLR+P            GF  +SD++LRL ARRH FAGY+ +            GG  T +   V TRHHAIDWN+VG+ R RPNKWR+EM   G  WKEWG+A+D+FDQH+Y+ERW+ LP G GPY AL R          ++++IVCGDHF   +DR  ++        +   L DLVD  V +G R EA++ +SLE  HGRI G +    W ID +LHPW+ G++
Sbjct:   66 VVGAWFRPLFLGGWIHSDSRT---ESVYNLQTPSLFIDLRIPNLEENKKWQDIHGFSQLSDVDLRLLARRHCFAGYSLLN----------QGGPWTIENPPVCTRHHAIDWNFVGKMRPRPNKWRIEMREDGKVWKEWGYARDEFDQHIYLERWELLPEGKGPYLALTR----DERYGREAILIVCGDHFNFAMDRPTKMPFDPQ-RQQVASLQDLVDSLVDKGDREEAIKYLSLEGCHGRISGKQ---AWVIDNALHPWMIGKK 309          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S0E054_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E054_9CRYP)

HSP 1 Score: 236 bits (601), Expect = 7.390e-68
Identity = 120/265 (45.28%), Postives = 159/265 (60.00%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHH-QGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 792
            + GAW RPLF+GGW HSD ++   E  +NLQTP+LF+DLR+P           QG   +SD +LRL ARRH FAGY+ +             G  T +   V TRHH+IDWN+VG+ R RPNKWR+EM   G  WKEWG+A+D+FDQH+Y+ERW+ LP G G Y A+RR          D+++IVCG+HF  ++DR  ++            L DLVD  V  G R EA++ +SLE  HGR+ G      W +D +LHPW  G+R
Sbjct:   69 VVGAWFRPLFLGGWIHSDATT---ESVYNLQTPSLFIDLRIPNLQVNERWKSVQGMSELSDDDLRLLARRHCFAGYSLLNE-----------GPWTSQNPPVCTRHHSIDWNFVGKMRPRPNKWRIEMREDGKVWKEWGYAKDEFDQHIYLERWELLPEGKGRYLAIRR----DERYGRDAILIVCGNHFNFVMDRPTKMPFDPERQSHAS-LQDLVDKLVQEGNREEAMKYLSLEGCHGRVSG---ANAWVVDNALHPWKIGKR 311          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S2US64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US64_9STRA)

HSP 1 Score: 218 bits (555), Expect = 4.830e-62
Identity = 123/288 (42.71%), Postives = 165/288 (57.29%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGG-DTWKEWGFAQDDFDQHVYMERWQRLPG---GGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEI 852
            + GAW R +F GG+ +S   S   E TFN+QT TLF+D+R+P      L + + F  + D+ LRL+AR+HAF GYT +        D E  G+G      V TRHH IDWN+VG PR RPNKW VE +P   D+WKEW +A DDF QH Y E+W RL G   G G   ALR+   A+   A D +++V GDHF  +  R+L  ++ R  A   G LV L+D  V+ G R+ A   +S+EASHGR+        W +D S+ PW +G + F G  I +  D  NG L +
Sbjct:    7 VCGAWTRSIFFGGFEYS---SAHDEQTFNVQTNTLFVDIRIPTLRQKKLANLRSFAALDDIGLRLYARQHAFGGYTVM--------DYEGPGNGRP----VCTRHHCIDWNFVGVPRPRPNKWWVEFKPSTRDSWKEWAYATDDFGQHYYCEQWDRLDGDSSGSGVVVALRK---AAGAGACDGILVVVGDHFNFLSGRALLGIENRYNA---GSLVQLIDAAVSVGDRKTAESFLSIEASHGRVSS-----GWMVDASVQPWREGTKLFSGAAIEVDVDP-NGALSV 267          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S0F6Z1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6Z1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 9.760e-60
Identity = 134/342 (39.18%), Postives = 176/342 (51.46%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDL---ELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGG-PYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVK-GRGGA--DRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVEST 1005
            +AG W RPLF GGW HS +  +     +N+QT  LF+DLR+P+A  ALL       ++ DL   +LR+ +R+H FAGYT++Q               TEK  LV TRHH IDWNYVG  R RPNKW VEM   G  WKE  +A DD  QH YMERWQR   G   P  ALR+R      +  D ++++CGDHF  + DR   V + GR  A       LVD+VD  + RG    A   +S+   HGRI        W IDC+ HPWL+GR  +  + + ++  +G            + PT   M L  +   AE G G       W G     VW+V +S+
Sbjct:   81 LAGCWDRPLFAGGWEHSTNCDEH---VYNVQTSNLFIDLRIPRARKALLKMDPEVASLRDLSTQQLRILSRQHVFAGYTKMQ---------------TEKGRLVCTRHHCIDWNYVGVARNRPNKWWVEMRSDGHVWKEMSYATDDHRQHYYMERWQRRQEGSAVPRLALRKRRG----NGRDGVVVICGDHFNYVFDRHWPVDEDGRQQAAGSHCATLVDMVDYLLERGKVDVARSYLSVNGGHGRIS-----QGWMIDCATHPWLEGRALWKKSSVAVVAGDGR-----------QPPTPTHM-LNGSGAEAE-GTGSSTFHLTWDGD----VWEVHDSS 378          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S4PHR7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PHR7_9EUKA)

HSP 1 Score: 204 bits (518), Expect = 6.150e-56
Identity = 109/294 (37.07%), Postives = 156/294 (53.06%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRG----------YRDVP-PWTIDCSLHPWLKGRRPFLGTVITILTD---EGNG 840
            + G+W R +F GGWT+SD  S  GE  FN+ T TLF+D+R+PK S  +  HH+ FDT S  ELRLF RRHAF G+  +   + P   GE           V TRHH IDWN+VG+ R RPN+WR+E+      WKEW   +D FDQH+YME W ++    G   A+ R     +     ++++V G++F  + DR +++      A   G L++L+D    +  R   +  +SL A HG+I               +P PW I  SLHPW + ++ F    I ++     EG G
Sbjct:   80 VTGSWNRHIFAGGWTYSDHLS--GEDVFNVVTNTLFIDIRIPKFSTKMFSHHKNFDTFSLEELRLFGRRHAFGGFGAID-MNNPKGPGEG----------VCTRHHWIDWNFVGKMRPRPNQWRIELNDDRSKWKEWSIVRDSFDQHLYMEMWVKMHNSNGRKIAMFREVDEKNGKKRPAILVVSGNYFNYLEDRDVDLES----AGDSGSLIELIDKAATQKDRTTLLSYLSLTAHHGQIDPTPSPSPSSFPLSSLPLPWMIHRSLHPWKERKQLFQKGEIQVINGGVREGEG 356          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S2X7A1_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7A1_9EUKA)

HSP 1 Score: 200 bits (509), Expect = 1.780e-54
Identity = 118/290 (40.69%), Postives = 158/290 (54.48%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQ-PRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASS 867
            I GAWRRPLF GGW    +S++   + FNLQTP+LF+D+R P          QGF  +S  ELR  AR+H FAGY+ V            GG G+     V TRHHA+DWNY    PR RPN+WR+E+ P G+++KE+  A D+  Q VYMERWQ  P G GPY ALRR    ++    +SL+IV G+HF    DR    +    GA +GG    LVD     G R +  +++ LE S+G +  +   P W I  S  PW +G+R        +LT +  G+ E +   S
Sbjct:   72 IVGAWRRPLFSGGWK---ESTEADTVVFNLQTPSLFIDIRFPLKRPDY-SKRQGFYQLSMAELRSLARQHCFAGYSLVNP---------KGGTGSAP---VCTRHHALDWNYHPSFPRARPNRWRIELSPNGESFKEFSVALDEHKQAVYMERWQMYPQGKGPYLALRRMKPQNAVDHRESLLIVVGNHFAFARDRK-HPLPLFSGASKGG-CASLVDAAFRAGDREKMEQMLDLEGSYGCVCDHEGNPTWEIKMSTLPWRQGQR--------LLTPKALGSKEFAKIPS 335          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A8J5XXE1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXE1_DIALT)

HSP 1 Score: 195 bits (495), Expect = 3.480e-52
Identity = 134/370 (36.22%), Postives = 167/370 (45.14%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQPRTRPNKWRVEMEPGG----------------DTWKEWGFAQDDFDQHVYMERWQRLPG---GGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRS----LEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERAEQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPDSLRKL 1041
              G W RPLF  GW  S D     E  FN+QT   F+DLRVP A  +L G     D ++  ELRL AR+H F GYT +   + P A             LV TRHHAIDWN+VG PR RPNKWRVEM P G                  WKEW FA DD  Q  YMERW R+ G   G GP  ALR      S S PD  I++ GDHF     R+    L   +  G A     LV++VD  VARG    A   + L   HGR+        W ID   HPWL+G +     ++     +G+   E+ A                  +   Q + H  D    IG      W++++ T + G+ D L  L
Sbjct:   76 FVGVWSRPLFTNGWEESTDVD---EAAFNVQTRGAFIDLRVPTARPSL-GSAGSLDALAAEELRLLARQHVFCGYT-LPVSAAPGAP------------LVCTRHHAIDWNFVGVPRARPNKWRVEMPPPGLRLGPSTAQGASGAAAAAWKEWSFALDDAGQSYYMERWARVDGDGDGAGPTLALR------SCSQPDEFIVLVGDHFAFARARAGCPLLPPARADGAAPPPASLVEMVDGAVARGDLATARSWLGLAGGHGRVSA-----GWRIDLCTHPWLEGTQLLRSDMVAGAIVDGHAAGEVHA------------------DLRAQALVHGADNVVVIG---GRPWELLDRTGLRGAEDVLHVL 396          
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Match: A0A7S3Z9A1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9A1_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 4.470e-51
Identity = 107/265 (40.38%), Postives = 148/265 (55.85%), Query Frame = 1
Query:    1 IAGAWRRPLFVGGWTHSDDSSQEGELTFNLQTPTLFLDLRVPKASAALLGHHQGFDTMSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHAIDWNYVGQ-PRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLPGGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGADRGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLHPWLKGRR 792
            I GAWRRPLF GGW    +S++   + FNLQ+P+LF+D+R P          +GF  +S  ELR  AR+H FAGY+ V            GG G+     V TRHHA+DWNY    PR RPN+WR+E+ P G+++KE+  A D+  Q VYMERW   P G GPY A+R     ++    ++L+IV G+HF    DR    +    G  +GG    LVD     G R +  ++++LE S+GR+  +   P W I  S  PW +G+R
Sbjct:   72 IVGAWRRPLFSGGWK---ESTEADTVVFNLQSPSLFIDIRFP-IKRPDYSKCKGFYELSMPELRSLARQHCFAGYSLVSP---------KGGTGSSP---VCTRHHALDWNYHPSFPRARPNRWRIELSPNGESFKEFSVALDEHKQAVYMERWAMYPNGKGPYLAMRLVKPENAADHRETLLIVVGNHFAFARDRK-HPLPSFPGVSKGG-CASLVDAAFRAGEREKMEQMLNLEGSYGRVCDHEGNPTWEIKMSTLPWRQGQR 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5007.12231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXJ2_ECTSI1.420e-13253.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YWZ2_9STRA5.480e-7250.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1JSR4_GUITC4.340e-7146.79Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0E054_9CRYP7.390e-6845.28Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2US64_9STRA4.830e-6242.71Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S0F6Z1_9STRA9.760e-6039.18Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4PHR7_9EUKA6.150e-5637.07Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A7S2X7A1_9EUKA1.780e-5440.69Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
A0A8J5XXE1_DIALT3.480e-5236.22Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3Z9A1_9EUKA4.470e-5140.38Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5007contigH-elongata_contig5007:3380..6900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.9
Seed ortholog evalue2.7e-84
Seed eggNOG ortholog2880.D7FXJ2
EggNOG OGs2C8UU@1,2S355@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size2046
Cds size972
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930824.2479696-UTR-H-elongata_contig5007:3379..35501622930824.2479696-UTR-H-elongata_contig5007:3379..3550Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5007 3380..3550 +
1691679586.170444-UTR-H-elongata_contig5007:3379..35501691679586.170444-UTR-H-elongata_contig5007:3379..3550Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5007 3380..3550 +
1622930824.3527608-UTR-H-elongata_contig5007:5997..69001622930824.3527608-UTR-H-elongata_contig5007:5997..6900Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5007 5998..6900 +
1691679586.2473657-UTR-H-elongata_contig5007:5997..69001691679586.2473657-UTR-H-elongata_contig5007:5997..6900Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5007 5998..6900 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930824.265087-CDS-H-elongata_contig5007:3550..35561622930824.265087-CDS-H-elongata_contig5007:3550..3556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 3551..3556 +
1691679586.1884482-CDS-H-elongata_contig5007:3550..35561691679586.1884482-CDS-H-elongata_contig5007:3550..3556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 3551..3556 +
1622930824.2861214-CDS-H-elongata_contig5007:3976..42221622930824.2861214-CDS-H-elongata_contig5007:3976..4222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 3977..4222 +
1691679586.1988032-CDS-H-elongata_contig5007:3976..42221691679586.1988032-CDS-H-elongata_contig5007:3976..4222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 3977..4222 +
1622930824.3036144-CDS-H-elongata_contig5007:4456..45601622930824.3036144-CDS-H-elongata_contig5007:4456..4560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 4457..4560 +
1691679586.211312-CDS-H-elongata_contig5007:4456..45601691679586.211312-CDS-H-elongata_contig5007:4456..4560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 4457..4560 +
1622930824.321116-CDS-H-elongata_contig5007:5127..53361622930824.321116-CDS-H-elongata_contig5007:5127..5336Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 5128..5336 +
1691679586.2212443-CDS-H-elongata_contig5007:5127..53361691679586.2212443-CDS-H-elongata_contig5007:5127..5336Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 5128..5336 +
1622930824.3382163-CDS-H-elongata_contig5007:5590..59971622930824.3382163-CDS-H-elongata_contig5007:5590..5997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 5591..5997 +
1691679586.2322748-CDS-H-elongata_contig5007:5590..59971691679586.2322748-CDS-H-elongata_contig5007:5590..5997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5007 5591..5997 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5007.12231.1prot_H-elongata_contig5007.12231.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5007 3551..5997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5007.12231.1

>prot_H-elongata_contig5007.12231.1 ID=prot_H-elongata_contig5007.12231.1|Name=mRNA_H-elongata_contig5007.12231.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MSDLELRLFARRHAFAGYTRVQAFSRPPADGESGGDGTEKRGLVATRHHA
IDWNYVGQPRTRPNKWRVEMEPGGDTWKEWGFAQDDFDQHVYMERWQRLP
GGGGPYFALRRRPSASSPSAPDSLIIVCGDHFGLILDRSLEVVKGRGGAD
RGGRLVDLVDDTVARGGRREAVELMSLEASHGRIRGYRDVPPWTIDCSLH
PWLKGRRPFLGTVITILTDEGNGTLEISAASSTEKPTARKMKLQNTVERA
EQGVGHQEDAFWWIGTPLNGVWDVVESTLVAGSPDSLRKLLESSGAKFVV
KESDSGREEGEGRGSAGFVQSML*
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mRNA from alignment at H-elongata_contig5007:3380..6900+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5007.12231.1 ID=mRNA_H-elongata_contig5007.12231.1|Name=mRNA_H-elongata_contig5007.12231.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3521bp|location=Sequence derived from alignment at H-elongata_contig5007:3380..6900+ (Himanthalia elongata Himel1 dioecious)
ATCGCTGGAGCCTGGAGGCGGCCTCTTTTTGTCGGGGGTTGGACCCACTC GGACGACAGCTCTCAAGAAGGAGAACTCACCTTCAACTTGCAGACACCCA CTTTGTTCCTGGACTTGCGAGTGCCGAAGGCTAGTGCGGCGTTGCTTGGA CATCACCAGGGATTCGACACTATGTCGGTGCGGTTCCCAGTGCCAGACGG CGCTCACCACACGTTTAGACTCTTGAGGCTCATACACCATCCTCCTATGC AATCGCATAAAATCCAGGCCGCAAACTGGAGGCCTACCACACGCTTCGAC ATGTTCAACTCCCGAGCTAGCTAGCAGATCGGACGACGTGGTTCTCTTTC AATCCCCCCAGAGTACATGTCTGATTGTCTGGGAGCGAGTCAGAATGCCG CAGATCCTCAACTCTCGTTGTTCATCCGTCTGTTCTGCTTACTGAACTAC CTGACCGGACGGCGTCTCTCTCTCTGATGCCCCGCAAAATACATAAATCT TTTGGTACCTTCAAGCACTGTGAGCGAGTTAGAATTCCATATATCTTCAA CTCCCGCTGTTTATCCGTCCCTTCGATCTTCGACGCTTGGGGTTCAGGAC TTGGAGCTTCGTCTTTTCGCCCGTAGGCACGCGTTCGCTGGCTATACCCG AGTGCAAGCATTTTCACGCCCCCCCGCTGATGGAGAAAGTGGAGGGGATG GGACAGAGAAGAGAGGATTGGTGGCCACACGGCACCACGCGATCGACTGG AATTACGTTGGACAGCCGCGCACGCGGCCCAATAAGTGGAGGGTGGAAAT GGAACCTGGCGGAGACACATGGAAGGAATGGGGGTTTGCCCAAGTAAAAC TTTAGTATGGATCGAGCTTTCTTTATCTCTCTCTTCATGCATCTCTTTCT CTTCATGTATATTCCCGCACGCAACCTACCCTTATAGTAACGTTTTTTGT GTTTCGAGCTAGGACTCGTGGGTATTCATACAATTGGGACTATCGTTTCG CTCCTCGTATAGAGCCTAATGGCCTGTAGCATGACAGTGAACGTTCAGCG CCCATCTGTATTGTTTTGTCCCGAAAGGACGATTTTGATCAACACGTTTA CATGGAGCGTTGGCAGAGATTGCCAGGGGGAGGAGGGCCCTACTTCGCAC TACGTCGGCGTCCATCGGCATCTTCACCCAGGTTAGTGTTTGTTATAATA GTATCCTTTCAATAAGGTGTGGTTGAAGCCCGGGTACGGGCGATTATCTA CCTGAAAGCTCCCCTTTTTGGCGTTTCTAGCCCTGCCATATGCCGCGTCT GTCTCTTTTGTCGTTTCTTTTTGGGAGCAACGCTTTGCGCTTTCTGTTTT ACCTTACCTCTATGTTCTAGCTAATGGGGCACCGCTTGATTCTTTCGGAA CATGTGGCTCCCGTGTTGCTAATCACAAAATCGTTTAGTGTCTGGTATCG GTATTCTTCGACGCGAAGGTGCACTCATTAAGCGCTTTGCTCCAATCCTG GACTGTAGGGCGTTGGGGTCCATCGTAAATCAGTTCTGTACCGCGATGTT ATTCGCCTCTACCCAAAGTGTTCGCATATTAGACCCGAATCTCGCTCCCT TTTGCTACTTGCTGTACGGGTGCGCCCGTGCCGCAAAATGTTCCCGCTTA TCGTGAGCCACCTCGCGTCATCATCAATTCGCTGACACGGTCCTTTGACT CTTATCACACCTCAACATCTACCCATTTCCCATTCTTTCTTCTCGAAGCG CGCCCGATTCGCTGATTATTGTTTGCGGCGACCACTTTGGTCTCATCCTC GACCGCTCCTTGGAGGTCGTGAAGGGGAGGGGAGGGGCCGACAGGGGCGG CAGGCTGGTTGACCTCGTGGACGACACAGTAGCGCGTGGGGGACGGCGAG AAGCGGTCGAGTTGATGTCACTGGAAGCATCTCACGGAAGAATCAGAGGC TACAGAGGTAGTGGGAAACAGCTCTACCTGTAGTCCTCGACAAATCTCGA CTTCAAATGAGTTACAACATTTCAATTCCGTTAAGACTTCGACGCTCCAG ATTTGAAATTCGATATTGTGCGGCATTATTTGCTGCTGTATTTCCCACCC TATTTGTATGATTACGCCAGTCAAGACCTCGAGGAGCGATGCTTTTACCA GAAAACACCCCATATTATTTCGTGTGAATCATCGAACAATCCCATGCGAC GCAAATACCAGATGTTCCACCGTGGACGATTGATTGCTCTCTTCATCCGT GGCTCAAAGGACGACGGCCGTTCTTAGGAACTGTGATCACCATCTTGACG GACGAAGGCAACGGAACACTGGAAATCAGTGCGGCATCCTCTACAGAAAA ACCGACTGCAAGGAAAATGAAGCTTCAAAACACTGTCGAGAGGGCCGAGC AAGGGGTAGGCCATCAGGAAGACGCCTTCTGGTGGATTGGAACTCCACTC AATGGTGTTTGGGATGTCGTAGAAAGTACGCTTGTGGCGGGTAGTCCGGA TTCTCTCAGGAAGCTGCTCGAATCGTCGGGGGCGAAGTTTGTTGTGAAAG AGAGCGATAGCGGTAGGGAAGAGGGCGAGGGGCGAGGAAGCGCGGGTTTC GTGCAGTCTATGTTGTAAAGGGGAGTATAGATCGCGCTGCTTGAGCCCTT TTTACGTAGCTGTACACAATGCTCGTTACGTACGAGTGCTGACGGGACCG CTGCTCGTCCTCTGTCCTCTGTATATGCGGGACTGGGGTTTTGATGAACA AATATTATTGATGCCCTACCCTCTACACGAATATCTCGCCCCGTGAATAA ACGTGCGGGAGTACGTACTTATTTCCCAGGCGGCCCCGACACGCGTAACG TTATGTTTAGTCACCACCTTTCCACGGAATAGCTACATATGTACAACATT TGAGGTAAGTATAGTACAAATGCAAGCGGAGCCATGCTTTGCCGAACCAG CTCCCCACGCTATACGCCGAAGATCTTTACCGGTAGACCACTAAGGCGTA AATCAGCGGTGCCACTTCCAACAGAAGAGTTAAGCCGTTTAGACCTGTTG CCTGCTGCTGTGATCGGGAGTCAAATTACTCAAAATAGGCTTACGGTCGT GGCGGTATTCGAAACGCTCACGCCACGGAGTATTGTGCTCAGAGGCGGGG CAGCGGGGACAAGAGGGAGATTTGCAGCGGTAGTCCGGCGTGGGTGTGTA ATCAACACGAGTAGGATGGGTCAATCCAACGACTTCCAGGGATAGCTCTC CATAAGGGGGGGGGATATTTGCAAACGCGGTGGCGCCCCCTTACGTACAA GTATCATGCCGAATTGCGTGGCCTAATGCAAATTGAGAAAAAATGAAAAT AGCTTCTCTGAATAATTTAGTTTGATCTCCGGAATTAACCAGGCCTCAAA TCTCGGAGCAGTGACATTTCCTCTGGGGGATCATTTTTGCAACCTAGATT TGGTAACACACATCCAGTTTTTACCTGGGAATAGCGGTCAGTCTTGGGGA GGAGAAAGTGCCAAATCGGGC
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Coding sequence (CDS) from alignment at H-elongata_contig5007:3380..6900+

>mRNA_H-elongata_contig5007.12231.1 ID=mRNA_H-elongata_contig5007.12231.1|Name=mRNA_H-elongata_contig5007.12231.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig5007:3380..6900+ (Himanthalia elongata Himel1 dioecious)
ATGTCGATGTCGGACTTGGAGCTTCGTCTTTTCGCCCGTAGGCACGCGTT
CGCTGGCTATACCCGAGTGCAAGCATTTTCACGCCCCCCCGCTGATGGAG
AAAGTGGAGGGGATGGGACAGAGAAGAGAGGATTGGTGGCCACACGGCAC
CACGCGATCGACTGGAATTACGTTGGACAGCCGCGCACGCGGCCCAATAA
GTGGAGGGTGGAAATGGAACCTGGCGGAGACACATGGAAGGAATGGGGGT
TTGCCCAAGACTTGGAGCTTCGTCTTTTCGCCCGTAGGCACGCGTTCGCT
GGCTATACCCGAGTGCAAGCATTTTCACGCCCCCCCGCTGATGGAGAAAG
TGGAGGGGATGGGACAGAGAAGAGAGGATTGGTGGCCACACGGCACCACG
CGATCGACTGGAATTACGTTGGACAGCCGCGCACGCGGCCCAATAAGTGG
AGGGTGGAAATGGAACCTGGCGGAGACACATGGAAGGAATGGGGGTTTGC
CCAAGACGATTTTGATCAACACGTTTACATGGAGCGTTGGCAGAGATTGC
CAGGGGGAGGAGGGCCCTACTTCGCACTACGTCGGCGTCCATCGGCATCT
TCACCCAGGACGATTTTGATCAACACGTTTACATGGAGCGTTGGCAGAGA
TTGCCAGGGGGAGGAGGGCCCTACTTCGCACTACGTCGGCGTCCATCGGC
ATCTTCACCCAGCGCGCCCGATTCGCTGATTATTGTTTGCGGCGACCACT
TTGGTCTCATCCTCGACCGCTCCTTGGAGGTCGTGAAGGGGAGGGGAGGG
GCCGACAGGGGCGGCAGGCTGGTTGACCTCGTGGACGACACAGTAGCGCG
TGGGGGACGGCGAGAAGCGGTCGAGTTGATGTCACTGGAAGCATCTCACG
GAAGAATCAGAGGCTACAGAGCGCGCCCGATTCGCTGATTATTGTTTGCG
GCGACCACTTTGGTCTCATCCTCGACCGCTCCTTGGAGGTCGTGAAGGGG
AGGGGAGGGGCCGACAGGGGCGGCAGGCTGGTTGACCTCGTGGACGACAC
AGTAGCGCGTGGGGGACGGCGAGAAGCGGTCGAGTTGATGTCACTGGAAG
CATCTCACGGAAGAATCAGAGGCTACAGAGATGTTCCACCGTGGACGATT
GATTGCTCTCTTCATCCGTGGCTCAAAGGACGACGGCCGTTCTTAGGAAC
TGTGATCACCATCTTGACGGACGAAGGCAACGGAACACTGGAAATCAGTG
CGGCATCCTCTACAGAAAAACCGACTGCAAGGAAAATGAAGCTTCAAAAC
ACTGTCGAGAGGGCCGAGCAAGGGGTAGGCCATCAGGAAGACGCCTTCTG
GTGGATTGGAACTCCACTCAATGGTGTTTGGGATGTCGTAGAAAGTACGC
TTGTGGCGGGTAGTCCGGATTCTCTCAGGAAGCTGCTCGAATCGTCGGGG
GCGAAGTTTGTTGTGAAAGAGAGCGATAGCGGTAGGGAAGAGGGCGAGGG
GCGAGGAAGCGCGGGTTTCGTGCAGTCTATGTTGTAAATGTTCCACCGTG
GACGATTGATTGCTCTCTTCATCCGTGGCTCAAAGGACGACGGCCGTTCT
TAGGAACTGTGATCACCATCTTGACGGACGAAGGCAACGGAACACTGGAA
ATCAGTGCGGCATCCTCTACAGAAAAACCGACTGCAAGGAAAATGAAGCT
TCAAAACACTGTCGAGAGGGCCGAGCAAGGGGTAGGCCATCAGGAAGACG
CCTTCTGGTGGATTGGAACTCCACTCAATGGTGTTTGGGATGTCGTAGAA
AGTACGCTTGTGGCGGGTAGTCCGGATTCTCTCAGGAAGCTGCTCGAATC
GTCGGGGGCGAAGTTTGTTGTGAAAGAGAGCGATAGCGGTAGGGAAGAGG
GCGAGGGGCGAGGAAGCGCGGGTTTCGTGCAGTCTATGTTGTAA
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