prot_H-elongata_contig50008.12223.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50008.12223.1
Unique Nameprot_H-elongata_contig50008.12223.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig50008.12223.1 vs. uniprot
Match: D7FKT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKT7_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 4.400e-16
Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 0 
Query:    1 MVLLDGPGSFTEDTRLLVVYGGVSLVKSRKNLNCVKAHADGED-------------------GLSQRTLSYNADVWVFRVSRRTWYCPNITGELPRGRYGHVS 84
            MV+L+G  +  EDTRLLVV+GGVS   S   L+   AH D +D                   G+ Q+ L Y+ADV VF +   TW+CP+ +G+LP GRYGH +
Sbjct:  175 MVVLNGADNLREDTRLLVVFGGVSTTNSDHPLD---AHLDEKDPTCSSDCDDAGDAMGISGGGIRQQPLHYHADVRVFNIGLSTWHCPDTSGDLPEGRYGHTA 274
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50008.12223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKT7_ECTSI4.400e-1641.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50008contigH-elongata_contig50008:3877..4128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50008.12223.1mRNA_H-elongata_contig50008.12223.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50008 3853..4128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50008.12223.1 ID=prot_H-elongata_contig50008.12223.1|Name=mRNA_H-elongata_contig50008.12223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MVLLDGPGSFTEDTRLLVVYGGVSLVKSRKNLNCVKAHADGEDGLSQRTL
SYNADVWVFRVSRRTWYCPNITGELPRGRYGHVS
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