prot_H-elongata_contig49907.12213.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49907.12213.1
Unique Nameprot_H-elongata_contig49907.12213.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: D7FMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP1_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.290e-24
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 RNQAKELPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSK 64
            R +AKELP++++ +  AAIFELGLKHSSPKV LMKLMPPKA+SLTTEHIKSRLQKYRLH+HRSK
Sbjct:    8 RARAKELPDKASASFAAAIFELGLKHSSPKV-LMKLMPPKANSLTTEHIKSRLQKYRLHAHRSK 70          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A835Z7B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B0_9STRA)

HSP 1 Score: 101 bits (252), Expect = 5.840e-23
Identity = 60/101 (59.41%), Postives = 68/101 (67.33%), Query Frame = 0
Query:    7 LPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRNISPRHGQEDDDDESEDE 107
            LP+        A+FELGL+HSSPKV LMKLMP   + LTTEHIKS LQKYRLH  RSKDEFLEFF LRLK KF  F +   WRN+ P    ED  +E  +E
Sbjct:  128 LPDALESRFATAVFELGLRHSSPKV-LMKLMP-NTEKLTTEHIKSHLQKYRLHYARSKDEFLEFFELRLKEKFGTFCAGHMWRNLPPHLADEDAAEEDMEE 226          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A7S4D6B3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6B3_HETAK)

HSP 1 Score: 93.6 bits (231), Expect = 2.490e-20
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    7 LPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRN 90
            LP+      VA++FE+GL++SSPKV LM+LMP   +SLTTEHIKS LQKYRLH  RSK+EFL++++  LK  F++F S+EGWRN
Sbjct:   30 LPKEMEADFVASVFEIGLRNSSPKV-LMQLMPL-TNSLTTEHIKSHLQKYRLHYTRSKEEFLQYYDSHLKRDFEDFVSQEGWRN 111          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A7S3HM56_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM56_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.610e-18
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    8 PERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRNIS 92
            P+       AAIFELGLKHSSPK+ LM LMP + + L+TEHIKS LQKYR+H  RSKDEF +F+N  +K  F+++++ EGW++++
Sbjct:   63 PKHLESNFAAAIFELGLKHSSPKI-LMPLMPNETN-LSTEHIKSHLQKYRIHRQRSKDEFFDFYNNYMKDAFQQWENAEGWKHLA 145          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A7R9YFR2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFR2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.500e-17
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    5 KELPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRNISPRHGQE 98
            + +P+    + V A+FE+GL  +SPKV LM  MP + D LTTEHIKS LQKYRLH  RSK+EF+E +N  LKA F+ F  K+ WR  S   G E
Sbjct:   59 QSIPDNFEASFVNAVFEIGLSRASPKV-LMNFMP-RVDMLTTEHIKSHLQKYRLHHGRSKNEFMEHYNQCLKADFRAFCDKQSWRYPSTSQGGE 150          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A6S6I6H3_9STRA (Phosphorus starvation response like 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I6H3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.880e-14
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    8 PERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGW 88
            P +     V A+F+LGLK SSPKV LM LMP   ++LTTEHIKS LQKYRLH +RSKDEF+E+FN  ++  F  F ++  W
Sbjct:  350 PAQHETDFVGAVFKLGLKCSSPKV-LMDLMPM-TETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMRGPFASFCARREW 428          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A482S6Z8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6Z8_9ARCH)

HSP 1 Score: 77.8 bits (190), Expect = 4.150e-14
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    6 ELPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGW 88
            + P++     ++AIFELGLK++SPK++L  L+PP  + L TEHIKS LQKYR+H  RSK+EF+ F+   +K  F ++  K GW
Sbjct:   75 QFPKQYEDQFLSAIFELGLKNASPKLIL-PLLPPTTE-LNTEHIKSHLQKYRVHKERSKEEFVAFYTEHIKHTFDDWDEKRGW 155          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A4D9DAJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAJ4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.920e-13
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    8 PERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGW 88
            P +     V A+F+LGL+ SSPKV LM LMP   D+LTTEHIKS LQKYRLH  RSK+EF+E++N  ++  F  F ++  W
Sbjct:  286 PPQHETDFVGAVFKLGLQCSSPKV-LMDLMPM-TDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYNGYMRGPFASFCARREW 364          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: W7TSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSM2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.170e-13
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    8 PERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGW 88
            P +     V A+F+LGL+ SSPKV LM LMP   D+LTTEHIKS LQKYRLH  RSK+EF+E++N  ++  F  F ++  W
Sbjct:  315 PPQHETDFVGAVFKLGLQCSSPKV-LMDLMPM-TDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYNGYMRGPFASFCARREW 393          
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Match: A0A6S6I2Y2_9STRA (Phosphorus starvation response like 2 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I2Y2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.460e-12
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    4 AKELPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIKSRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRNIS 92
            A  L  +       A+F++GLK SSP+V++  +  P   ++TTEH+KS LQKYRLH  RS +EF+ F+   ++  F  FQ++ GW ++S
Sbjct:  178 ALNLTSKQEEEFAGAVFQIGLKRSSPRVLMDHM--PDTSTITTEHVKSHLQKYRLHHQRSNEEFMTFYREHIREPFASFQARRGWLDVS 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49907.12213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMP1_ECTSI3.290e-2479.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7B0_9STRA5.840e-2359.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D6B3_HETAK2.490e-2059.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HM56_9STRA1.610e-1854.12Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9YFR2_9STRA1.500e-1752.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S6I6H3_9STRA1.880e-1455.56Phosphorus starvation response like 1 n=1 Tax=Nann... [more]
A0A482S6Z8_9ARCH4.150e-1448.19Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A4D9DAJ4_9STRA1.920e-1353.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TSM2_9STRA2.170e-1353.09Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A6S6I2Y2_9STRA1.460e-1240.45Phosphorus starvation response like 2 n=1 Tax=Nann... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 12..63
e-value: 6.9E-10
score: 40.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49907contigH-elongata_contig49907:460..2241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49907.12213.1mRNA_H-elongata_contig49907.12213.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49907 460..2241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49907.12213.1 ID=prot_H-elongata_contig49907.12213.1|Name=mRNA_H-elongata_contig49907.12213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
RNQAKELPERSTCALVAAIFELGLKHSSPKVVLMKLMPPKADSLTTEHIK
SRLQKYRLHSHRSKDEFLEFFNLRLKAKFKEFQSKEGWRNISPRHGQEDD
DDESEDESGKVGEGGAGAGGNGGERRGSAGLEAKGAPALNVDGQMVRAGD
RYGASATFATWARSACESSSTCRR*
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