prot_H-elongata_contig49798.12198.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49798.12198.1
Unique Nameprot_H-elongata_contig49798.12198.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length394
Homology
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Match: D7G589_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G589_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 1.600e-149
Identity = 240/393 (61.07%), Postives = 289/393 (73.54%), Query Frame = 0
Query:    2 ALAKLISKKQGQLALMGKLILPWRPMLAALNDCSARRFPLGSGSNERHRLVPLLQLISEAKRYWAPGADREIWLEVREDIYQVQSQTTFRALYILCLFMP-ARPSLYDELVPEWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRHVSPAFDWTPYMPAIYNLARASIHTPVSMGEAGSAPLQLGRQVAYQYQAIAPVAARSPSVMFGKLGKMVVFFLGKGGPTEVVRTSDMAIIPPAGNYYG------DNDAPRTVSPGALNLLSLFRGIRTYFHPSNGGRWSIEVALMTNCVLYSLATRVGVESVLRDAGRPIPGGELSRDDALLLTTELLPLVLEMVYSKNSSVGAIANNSLGNLATLTPKSVAPAFVKLALRALDPVSSINHTHQ 387
            AL  L+ +KQG+L+L G+L+LPWRPMLAAL  C+ R FP GS   ER RL+ L  L+  A+RYW PGADREIW E +E+I QV +Q  F+ALY+   FMP AR SLYDE++P WF          LWGQVDHCP+WDG WLTL CRAR++ S +FDWTPYM  IY+ ARASIHT VSMG+AGSAP    R+VAYQY   AP AA S      KL K +VF LGKGG  EVV+ SD+AI+PPAG   G      +    RTVSPGALNL+SLFRG+RTYFHPSNGGRWS+E+ LM N VL SLA+RVG E+VLR+ G  +P GEL++DDA L+   LLPLVLEMVYSK+ SVG+++N  L  LA+L+PK+VAPA  +L LRALDPV+SINHTHQ
Sbjct:  104 ALGSLLGQKQGRLSLAGRLVLPWRPMLAALEACALRGFPTGSNMTERSRLLALQHLLRRARRYWGPGADREIWDEFKEEIAQVHAQGAFKALYLFVAFMPSARSSLYDEVLPSWFS---------LWGQVDHCPAWDGAWLTLLCRARKYASASFDWTPYMADIYSSARASIHTLVSMGDAGSAPPIRSRRVAYQYSVFAPTAATSRGTKLKKLSKFMVFLLGKGGSAEVVKVSDVAIVPPAGEGIGGAQDGHEGGVQRTVSPGALNLISLFRGLRTYFHPSNGGRWSLEMGLMVNYVLKSLASRVGGENVLRELGNTLPPGELTQDDAGLVIDALLPLVLEMVYSKDPSVGSLSNMCLATLASLSPKTVAPAAAELVLRALDPVASINHTHQ 487          
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Match: A0A2K3CYI3_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CYI3_CHLRE)

HSP 1 Score: 73.6 bits (179), Expect = 2.930e-10
Identity = 75/291 (25.77%), Postives = 112/291 (38.49%), Query Frame = 0
Query:   19 KLILPWRPMLAALNDCSARRFPLGSG-SNERHRLVPLLQLISEAKRYWAPGADREIWLEVREDIYQVQSQTT--FRALYILCLFMPA------RPSLYDELVPEWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRHV-SPAFDWTPYMPAIYNLARASIHTPVSM----GEA------GSAPLQLGRQVAYQYQAIAPV-AARSPSVMFGKLGKMVVFFLGKGGPTEVVRTSDMAIIPPAGNYYGDNDAPRTVSPGALNLLSLFRGIRTYFHPSNGGRWSIEVALM 288
            +L+LPWRP+LA +        P   G +    R   L +L+++A+RY+ P A  E+W  +   +  V S+    + AL  L LF P       R S  +  V +W  +         WG   +   WD  WL+L  RA +H       W+P++P +Y    A    PV      GEA      G A +  G Q+ Y      P   AR    +   L    +    +G                                G L  L+    +  Y+HPSN G+WS E+A +
Sbjct:  119 RLVLPWRPLLAVMQRTIGLPLPKLEGVAMTAARGSALTKLVAKARRYFPPEALGEVWAALAPAVSAVGSRPAEAYEALGYLQLFAPTHNICACRWSAVNGWVRQWMGA---------WGLAANSGGWDALWLSLVGRAAKHDWRGVICWSPHLPHLYGAIAAMFDVPVGAARGGGEAVNRPAPGRAAVLFGDQMGY-----GPFHGARLAVHLLRSLDPAGLAAQQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHLEHLTAL--LEQYYHPSNTGKWSRELATL 393          
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Match: A0A835VZW6_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VZW6_CHLIN)

HSP 1 Score: 70.1 bits (170), Expect = 3.780e-9
Identity = 70/286 (24.48%), Postives = 106/286 (37.06%), Query Frame = 0
Query:   19 KLILPWRPMLAALNDCSARRFPLGSG-SNERHRLVPLLQLISEAKRYWAPGADREIWLEVREDIYQVQSQTT--FRALYILCLFMPARPSLYDELVP--EWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRHV-SPAFDWTPYMPAIYNLARASIHTPVSMGEAGSAPLQLGRQVAYQYQAIAPVAARSPSVMFGKLGKMVVFFLGKGGPTEVVRTSDMAIIPPAGNYYGDNDAPRTVSPGALNLLS----------LFRGIRTYFHPSNGGRWSIEVALM 288
            +L+LPWRP+LA +        P   G +    R   L++L ++A+RY+ P A  E+W  +   +  V ++    + AL  L LF P          P   W R  +       WG   +   WD  WL L  RA +H       W P++P +Y    A    PV     G   +              P   R+  V+FG       F  G      ++R+ D A +       G  +                        L   +  Y+HPSN G+WS E+A +
Sbjct:  119 RLVLPWRPLLAVMQRTIGLPLPKLEGVAMTAARGNALMKLAAKARRYFPPEALGEVWAALAPAVSAVGARPAEAYEALGYLQLFAPTHNICACPWAPLNAWVRQWMGA-----WGLAANSAGWDALWLALVGRAAKHDWRGVIAWRPHLPHLYGAITAMFDVPVGAARGGGEAVNR------------PPPGRA-GVLFGDQMGFGPFH-GARLAVHLLRSLDPAGLAAQAAAQGGVEGSXXXXXXXXXXXXXXXXXXXXXXLTALLEQYYHPSNTGKWSRELATL 385          
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Match: A0A835WIY3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WIY3_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 3.790e-9
Identity = 51/170 (30.00%), Postives = 73/170 (42.94%), Query Frame = 0
Query:   19 KLILPWRPMLAALNDCSARRFPLGSG-SNERHRLVPLLQLISEAKRYWAPGADREIWLEVREDIYQVQSQTT--FRALYILCLFMPARPSLYDE--LVPEWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRHV-SPAFDWTPYMPAIYNLARASIHTPVSMGEAG 182
            +L+LPWRP++A L        P   G +    R   LL+L+ +A+RY+ P A  E+W  +   I  V S+    + AL  L LF P           V  W R  +       WG   +   WD  WL+L  RA +H       W+P++P +Y    A    PV     G
Sbjct:  119 RLVLPWRPLMAVLQRTMGLPLPKLEGVAMTAARGNALLKLVIKARRYFPPEALGEVWAALAPAITAVGSRPAEAYEALGYLQLFAPTHNICACPWGAVNGWVRQWMDA-----WGLAANASGWDALWLSLVGRAAKHDWRGVIAWSPHLPHLYGAITAMFDVPVGAARGG 283          
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Match: A0A2V0P2R9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2R9_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 1.310e-5
Identity = 48/177 (27.12%), Postives = 69/177 (38.98%), Query Frame = 0
Query:   16 LMGKLILPWRPMLAALN-DCSARRFP-LGSGSNERHRLVPLLQLISEAKRYWAPGADREIWLEVREDIY--QVQSQTTFRALYILCLFMPAR--PSLYDELVPEWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRHV-SPAFDWTPYMPAIYNLARASIHTPVSMGEAGSAP 185
            L   L LPWRP+  AL   C     P +  G     R   L  L+  A+R++   A  EIW   R  +            +L  L L  P +  P +       W    + C     W ++  C  W   W+ L  RA +       DW P++P +Y    A+ + PV  G A +AP
Sbjct:  114 LAAALELPWRPLYDALRAQCVGEGLPEIKGGMLTGARHSALFSLVPAARRFFPAPAAGEIWAAARPALVGGDPSGAAAMLSLGWLVLLFPTKRLPEVPQSEARAWVADWMGC-----WDRLAFCEYWASHWMYLLARAAKDDWKGVIDWRPHLPRLYTHMLAAFNVPV--GTATAAP 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49798.12198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G589_ECTSI1.600e-14961.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2K3CYI3_CHLRE2.930e-1025.77Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A835VZW6_CHLIN3.780e-924.48Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A835WIY3_9CHLO3.790e-930.00Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A2V0P2R9_9CHLO1.310e-527.12Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032430Proteasome activator Blm10, mid regionPFAMPF16507BLM10_midcoord: 263..389
e-value: 1.4E-12
score: 47.1
IPR035309Proteasome activator complex subunit 4PANTHERPTHR32170FAMILY NOT NAMEDcoord: 13..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49798contigH-elongata_contig49798:615..2797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49798.12198.1mRNA_H-elongata_contig49798.12198.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49798 615..2797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49798.12198.1 ID=prot_H-elongata_contig49798.12198.1|Name=mRNA_H-elongata_contig49798.12198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=394bp
SALAKLISKKQGQLALMGKLILPWRPMLAALNDCSARRFPLGSGSNERHR
LVPLLQLISEAKRYWAPGADREIWLEVREDIYQVQSQTTFRALYILCLFM
PARPSLYDELVPEWFRSAIKCLNVLLWGQVDHCPSWDGGWLTLFCRARRH
VSPAFDWTPYMPAIYNLARASIHTPVSMGEAGSAPLQLGRQVAYQYQAIA
PVAARSPSVMFGKLGKMVVFFLGKGGPTEVVRTSDMAIIPPAGNYYGDND
APRTVSPGALNLLSLFRGIRTYFHPSNGGRWSIEVALMTNCVLYSLATRV
GVESVLRDAGRPIPGGELSRDDALLLTTELLPLVLEMVYSKNSSVGAIAN
NSLGNLATLTPKSVAPAFVKLALRALDPVSSINHTHQVSNFRLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032430Blm10_mid
IPR035309PSME4